RNA–Protein interactions for RNA: ENST00000585241.5

SS18-226, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 774 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-226ENST00000585241 PNLIPP16233 465 aa15.57■□□□□ 0.08
SS18-226ENST00000585241 GPR3P46089 330 aa15.57■□□□□ 0.08
SS18-226ENST00000585241 ATXN3P54252 364 aaPredicted RBP15.57■□□□□ 0.08
SS18-226ENST00000585241 PRDX1Q06830 199 aaKnown RBP15.57■□□□□ 0.08
SS18-226ENST00000585241 UGT3A2Q3SY77 523 aa15.57■□□□□ 0.08
SS18-226ENST00000585241 SH2D4BQ5SQS7 431 aa15.57■□□□□ 0.08
SS18-226ENST00000585241 LIPJQ5W064 366 aa15.57■□□□□ 0.08
SS18-226ENST00000585241 ICE2Q659A1 982 aa15.57■□□□□ 0.08
SS18-226ENST00000585241 ATG9BQ674R7 924 aa15.57■□□□□ 0.08
SS18-226ENST00000585241 RNF165Q6ZSG1 346 aa15.57■□□□□ 0.08
SS18-226ENST00000585241 MILR1Q7Z6M3 343 aa15.57■□□□□ 0.08
SS18-226ENST00000585241 CLYBLQ8N0X4 340 aa15.57■□□□□ 0.08
SS18-226ENST00000585241 C2orf73Q8N5S3 287 aaPredicted RBP15.57■□□□□ 0.08
SS18-226ENST00000585241 ABHD11Q8NFV4 315 aa15.57■□□□□ 0.08
SS18-226ENST00000585241 STON2Q8WXE9 905 aa15.57■□□□□ 0.08
SS18-226ENST00000585241 ATP6V1E2Q96A05 226 aa15.57■□□□□ 0.08
SS18-226ENST00000585241 FAR2Q96K12 515 aa15.57■□□□□ 0.08
SS18-226ENST00000585241 APOLD1Q96LR9 279 aa15.57■□□□□ 0.08
SS18-226ENST00000585241 SIKE1Q9BRV8 207 aa15.57■□□□□ 0.08
SS18-226ENST00000585241 TBC1D10AQ9BXI6 508 aa15.57■□□□□ 0.08
SS18-226ENST00000585241 SLC29A3Q9BZD2 475 aa15.57■□□□□ 0.08
SS18-226ENST00000585241 SHCBP1LQ9BZQ2 653 aa15.57■□□□□ 0.08
SS18-226ENST00000585241 EPB41L1Q9H4G0 881 aa15.57■□□□□ 0.08
SS18-226ENST00000585241 PELI2Q9HAT8 420 aa15.57■□□□□ 0.08
SS18-226ENST00000585241 PNPOQ9NVS9 261 aa15.57■□□□□ 0.08
SS18-226ENST00000585241 SH2B3Q9UQQ2 575 aa15.57■□□□□ 0.08
SS18-226ENST00000585241 TRAF6Q9Y4K3 522 aa15.57■□□□□ 0.08
SS18-226ENST00000585241 PCM1Q15154 2024 aa15.56■□□□□ 0.08
SS18-226ENST00000585241 PIPSLA2A3N6 862 aa15.56■□□□□ 0.08
SS18-226ENST00000585241 ZNF195O14628 629 aa15.56■□□□□ 0.08
SS18-226ENST00000585241 GIPC1O14908 333 aa15.56■□□□□ 0.08
SS18-226ENST00000585241 UROSP10746 265 aa15.56■□□□□ 0.08
SS18-226ENST00000585241 CD22P20273 847 aa15.56■□□□□ 0.08
SS18-226ENST00000585241 PSMB5P28074 263 aa15.56■□□□□ 0.08
SS18-226ENST00000585241 HNF4AP41235 474 aa15.56■□□□□ 0.08
SS18-226ENST00000585241 FOXA1P55317 472 aa15.56■□□□□ 0.08
SS18-226ENST00000585241 IRF8Q02556 426 aa15.56■□□□□ 0.08
SS18-226ENST00000585241 CHIT1Q13231 466 aa15.56■□□□□ 0.08
SS18-226ENST00000585241 SUZ12Q15022 739 aaKnown RBP15.56■□□□□ 0.08
SS18-226ENST00000585241 NR0B2Q15466 257 aa15.56■□□□□ 0.08
SS18-226ENST00000585241 CSRP2Q16527 193 aa15.56■□□□□ 0.08
SS18-226ENST00000585241 PROX2Q3B8N5 592 aa15.56■□□□□ 0.08
SS18-226ENST00000585241 THEMIS2Q5TEJ8 643 aa15.56■□□□□ 0.08
SS18-226ENST00000585241 GRHL2Q6ISB3 625 aa15.56■□□□□ 0.08
SS18-226ENST00000585241 KLHL35Q6PF15 583 aa15.56■□□□□ 0.08
SS18-226ENST00000585241 NXPE4Q6UWF7 544 aa15.56■□□□□ 0.08
SS18-226ENST00000585241 C17orf64Q86WR6 236 aa15.56■□□□□ 0.08
SS18-226ENST00000585241 OOSP2Q86WS3 158 aa15.56■□□□□ 0.08
SS18-226ENST00000585241 ZNF761Q86XN6 746 aaPredicted RBP15.56■□□□□ 0.08
SS18-226ENST00000585241 WDR75Q8IWA0 830 aaKnown RBP15.56■□□□□ 0.08
SS18-226ENST00000585241 OR2L3Q8NG85 312 aa15.56■□□□□ 0.08
SS18-226ENST00000585241 PTCD3Q96EY7 689 aaKnown RBP15.56■□□□□ 0.08
SS18-226ENST00000585241 CDK15Q96Q40 435 aa15.56■□□□□ 0.08
SS18-226ENST00000585241 OR2A14Q96R47 310 aa15.56■□□□□ 0.08
SS18-226ENST00000585241 SLC38A3Q99624 504 aa15.56■□□□□ 0.08
SS18-226ENST00000585241 TRIM55Q9BYV6 548 aa15.56■□□□□ 0.08
SS18-226ENST00000585241 RAB33BQ9H082 229 aa15.56■□□□□ 0.08
SS18-226ENST00000585241 ACTR8Q9H981 624 aa15.56■□□□□ 0.08
SS18-226ENST00000585241 ACTR10Q9NZ32 417 aa15.56■□□□□ 0.08
SS18-226ENST00000585241 LRIT1Q9P2V4 623 aa15.56■□□□□ 0.08
SS18-226ENST00000585241 VTI1BQ9UEU0 232 aa15.56■□□□□ 0.08
SS18-226ENST00000585241 PADI4Q9UM07 663 aa15.56■□□□□ 0.08
SS18-226ENST00000585241 KLK4Q9Y5K2 254 aa15.56■□□□□ 0.08
SS18-226ENST00000585241 VPS13AQ96RL7 3174 aa15.56■□□□□ 0.08
SS18-226ENST00000585241 COL5A1P20908 1838 aaPredicted RBP15.55■□□□□ 0.08
SS18-226ENST00000585241 EME2A4GXA9 379 aaPredicted RBP15.55■□□□□ 0.08
SS18-226ENST00000585241 OR6C74A6NCV1 312 aa15.55■□□□□ 0.08
SS18-226ENST00000585241 RHPN2P1A8MT19 583 aa15.55■□□□□ 0.08
SS18-226ENST00000585241 C2orf74A8MZ97 194 aa15.55■□□□□ 0.08
SS18-226ENST00000585241 PROB1E7EW31 1015 aa15.55■□□□□ 0.08
SS18-226ENST00000585241 CDX4O14627 284 aaPredicted RBP15.55■□□□□ 0.08
SS18-226ENST00000585241 HDAC3O15379 428 aa15.55■□□□□ 0.08
SS18-226ENST00000585241 UBXN7O94888 489 aa15.55■□□□□ 0.08
SS18-226ENST00000585241 C1GALT1C1LP0DN25 315 aa15.55■□□□□ 0.08
SS18-226ENST00000585241 TROVE2P10155 538 aaKnown RBP eCLIP15.55■□□□□ 0.08
SS18-226ENST00000585241 HGFP14210 728 aa15.55■□□□□ 0.08
SS18-226ENST00000585241 JUPP14923 745 aa15.55■□□□□ 0.08
SS18-226ENST00000585241 HRH2P25021 359 aa15.55■□□□□ 0.08
SS18-226ENST00000585241 CAPZBP47756 277 aa15.55■□□□□ 0.08
SS18-226ENST00000585241 INHBCP55103 352 aa15.55■□□□□ 0.08
SS18-226ENST00000585241 SLC14A1Q13336 389 aa15.55■□□□□ 0.08
SS18-226ENST00000585241 BIRC2Q13490 618 aa15.55■□□□□ 0.08
SS18-226ENST00000585241 TSTA3Q13630 321 aaPredicted RBP15.55■□□□□ 0.08
SS18-226ENST00000585241 DOC2AQ14183 400 aa15.55■□□□□ 0.08
SS18-226ENST00000585241 SF3A2Q15428 464 aaKnown RBP15.55■□□□□ 0.08
SS18-226ENST00000585241 SLC5A12Q1EHB4 618 aa15.55■□□□□ 0.08
SS18-226ENST00000585241 INAVAQ3KP66 663 aa15.55■□□□□ 0.08
SS18-226ENST00000585241 EFL1Q7Z2Z2 1120 aaKnown RBP15.55■□□□□ 0.08
SS18-226ENST00000585241 MAVSQ7Z434 540 aa15.55■□□□□ 0.08
SS18-226ENST00000585241 TMPRSS11BQ86T26 416 aa15.55■□□□□ 0.08
SS18-226ENST00000585241 FAM129CQ86XR2 697 aa15.55■□□□□ 0.08
SS18-226ENST00000585241 AFAP1L2Q8N4X5 818 aa15.55■□□□□ 0.08
SS18-226ENST00000585241 EID2Q8N6I1 236 aa15.55■□□□□ 0.08
SS18-226ENST00000585241 OR4K1Q8NGD4 311 aa15.55■□□□□ 0.08
SS18-226ENST00000585241 RSC1A1Q92681 617 aa15.55■□□□□ 0.08
SS18-226ENST00000585241 CCT8L2Q96SF2 557 aa15.55■□□□□ 0.08
SS18-226ENST00000585241 EFCAB11Q9BUY7 163 aa15.55■□□□□ 0.08
SS18-226ENST00000585241 PITHD1Q9GZP4 211 aaPredicted RBP15.55■□□□□ 0.08
SS18-226ENST00000585241 SEMA4GQ9NTN9 838 aa15.55■□□□□ 0.08
SS18-226ENST00000585241 KLHL14Q9P2G3 628 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms