RNA–Protein interactions for RNA: ENST00000585121.5

SS18-225, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-225ENST00000585121 GIMAP7Q8NHV1 300 aa11.86□□□□□ -0.51
SS18-225ENST00000585121 CD200R1Q8TD46 325 aa11.86□□□□□ -0.51
SS18-225ENST00000585121 MCOLN3Q8TDD5 553 aa11.86□□□□□ -0.51
SS18-225ENST00000585121 PTERQ96BW5 349 aa11.86□□□□□ -0.51
SS18-225ENST00000585121 CERS2Q96G23 380 aa11.86□□□□□ -0.51
SS18-225ENST00000585121 CFAP36Q96G28 342 aa11.86□□□□□ -0.51
SS18-225ENST00000585121 SNF8Q96H20 258 aa11.86□□□□□ -0.51
SS18-225ENST00000585121 ZFYVE21Q9BQ24 234 aa11.86□□□□□ -0.51
SS18-225ENST00000585121 DPH7Q9BTV6 452 aa11.86□□□□□ -0.51
SS18-225ENST00000585121 TRIM55Q9BYV6 548 aa11.86□□□□□ -0.51
SS18-225ENST00000585121 ZC3H7BQ9UGR2 993 aaKnown RBP11.86□□□□□ -0.51
SS18-225ENST00000585121 PCDHGA9Q9Y5G4 932 aaKnown RBP11.86□□□□□ -0.51
SS18-225ENST00000585121 EFCAB8A8MWE9 144 aa11.86□□□□□ -0.51
SS18-225ENST00000585121 GFYI3L273 518 aa11.86□□□□□ -0.51
SS18-225ENST00000585121 TTI1O43156 1089 aa11.86□□□□□ -0.51
SS18-225ENST00000585121 KLHL41O60662 606 aa11.86□□□□□ -0.51
SS18-225ENST00000585121 BANF1O75531 89 aa11.86□□□□□ -0.51
SS18-225ENST00000585121 KLF7O75840 302 aaPredicted RBP11.86□□□□□ -0.51
SS18-225ENST00000585121 EIF2S1P05198 315 aaKnown RBP11.86□□□□□ -0.51
SS18-225ENST00000585121 IVDP26440 423 aa11.86□□□□□ -0.51
SS18-225ENST00000585121 CASRP41180 1078 aa11.86□□□□□ -0.51
SS18-225ENST00000585121 ITGA8P53708 1063 aa11.86□□□□□ -0.51
SS18-225ENST00000585121 ABATP80404 500 aa11.86□□□□□ -0.51
SS18-225ENST00000585121 TLE1Q04724 770 aa11.86□□□□□ -0.51
SS18-225ENST00000585121 MSS51Q4VC12 460 aa11.86□□□□□ -0.51
SS18-225ENST00000585121 FAM69BQ5VUD6 431 aa11.86□□□□□ -0.51
SS18-225ENST00000585121 CPZQ66K79 652 aa11.86□□□□□ -0.51
SS18-225ENST00000585121 HIBCHQ6NVY1 386 aaPredicted RBP11.86□□□□□ -0.51
SS18-225ENST00000585121 SUSD1Q6UWL2 747 aa11.86□□□□□ -0.51
SS18-225ENST00000585121 CPNE9Q8IYJ1 553 aa11.86□□□□□ -0.51
SS18-225ENST00000585121 MYO1HQ8N1T3 1032 aa11.86□□□□□ -0.51
SS18-225ENST00000585121 BBOF1Q8ND07 529 aa11.86□□□□□ -0.51
SS18-225ENST00000585121 FKBP10Q96AY3 582 aa11.86□□□□□ -0.51
SS18-225ENST00000585121 FER1L6-AS2Q96M78 137 aa11.86□□□□□ -0.51
SS18-225ENST00000585121 ZNF285Q96NJ3 590 aa11.86□□□□□ -0.51
SS18-225ENST00000585121 TRIM31Q9BZY9 425 aa11.86□□□□□ -0.51
SS18-225ENST00000585121 CLMPQ9H6B4 373 aa11.86□□□□□ -0.51
SS18-225ENST00000585121 ABCF3Q9NUQ8 709 aa11.86□□□□□ -0.51
SS18-225ENST00000585121 TAC3Q9UHF0 121 aa11.86□□□□□ -0.51
SS18-225ENST00000585121 CHMP2BQ9UQN3 213 aa11.86□□□□□ -0.51
SS18-225ENST00000585121 MED16Q9Y2X0 877 aa11.86□□□□□ -0.51
SS18-225ENST00000585121 ZNF451Q9Y4E5 1061 aa11.86□□□□□ -0.51
SS18-225ENST00000585121 PCDHGB7Q9Y5F8 929 aa11.86□□□□□ -0.51
SS18-225ENST00000585121 OR2A25A4D2G3 310 aa11.85□□□□□ -0.51
SS18-225ENST00000585121 FITM1A5D6W6 292 aa11.85□□□□□ -0.51
SS18-225ENST00000585121 PYCARD-AS1I3L0S3 204 aa11.85□□□□□ -0.51
SS18-225ENST00000585121 CTSVO60911 334 aa11.85□□□□□ -0.51
SS18-225ENST00000585121 SLC16A8O95907 504 aa11.85□□□□□ -0.51
SS18-225ENST00000585121 AHSGP02765 367 aa11.85□□□□□ -0.51
SS18-225ENST00000585121 ALBP02768 609 aa11.85□□□□□ -0.51
SS18-225ENST00000585121 C8GP07360 202 aa11.85□□□□□ -0.51
SS18-225ENST00000585121 NR1D1P20393 614 aa11.85□□□□□ -0.51
SS18-225ENST00000585121 MCM3P25205 808 aa11.85□□□□□ -0.51
SS18-225ENST00000585121 ELK3P41970 407 aa11.85□□□□□ -0.51
SS18-225ENST00000585121 PRDX1Q06830 199 aaKnown RBP11.85□□□□□ -0.51
SS18-225ENST00000585121 PDAP1Q13442 181 aaKnown RBP11.85□□□□□ -0.51
SS18-225ENST00000585121 ATP1A4Q13733 1029 aa11.85□□□□□ -0.51
SS18-225ENST00000585121 MUM1Q2TAK8 710 aa11.85□□□□□ -0.51
SS18-225ENST00000585121 ICE2Q659A1 982 aa11.85□□□□□ -0.51
SS18-225ENST00000585121 MRPL14Q6P1L8 145 aaKnown RBP11.85□□□□□ -0.51
SS18-225ENST00000585121 CYHR1Q6ZMK1 362 aa11.85□□□□□ -0.51
SS18-225ENST00000585121 RNF44Q7L0R7 432 aa11.85□□□□□ -0.51
SS18-225ENST00000585121 OVCH1Q7RTY7 1134 aa11.85□□□□□ -0.51
SS18-225ENST00000585121 PIWIL4Q7Z3Z4 852 aaKnown RBP11.85□□□□□ -0.51
SS18-225ENST00000585121 ADCK2Q7Z695 626 aa11.85□□□□□ -0.51
SS18-225ENST00000585121 GALNT7Q86SF2 657 aa11.85□□□□□ -0.51
SS18-225ENST00000585121 IGDCC3Q8IVU1 814 aa11.85□□□□□ -0.51
SS18-225ENST00000585121 CNTN4Q8IWV2 1026 aa11.85□□□□□ -0.51
SS18-225ENST00000585121 C17orf53Q8N3J3 647 aaPredicted RBP11.85□□□□□ -0.51
SS18-225ENST00000585121 CLEC1AQ8NC01 280 aa11.85□□□□□ -0.51
SS18-225ENST00000585121 ZNF480Q8WV37 535 aa11.85□□□□□ -0.51
SS18-225ENST00000585121 RERGQ96A58 199 aaPredicted RBP11.85□□□□□ -0.51
SS18-225ENST00000585121 VPS50Q96JG6 964 aa11.85□□□□□ -0.51
SS18-225ENST00000585121 CCDC138Q96M89 665 aa11.85□□□□□ -0.51
SS18-225ENST00000585121 KRT12Q99456 494 aa11.85□□□□□ -0.51
SS18-225ENST00000585121 NDNQ99608 321 aa11.85□□□□□ -0.51
SS18-225ENST00000585121 PLCD4Q9BRC7 762 aa11.85□□□□□ -0.51
SS18-225ENST00000585121 TRIM51Q9BSJ1 452 aa11.85□□□□□ -0.51
SS18-225ENST00000585121 ENAMQ9NRM1 1142 aa11.85□□□□□ -0.51
SS18-225ENST00000585121 NXT1Q9UKK6 140 aaKnown RBP11.85□□□□□ -0.51
SS18-225ENST00000585121 CORO1CQ9ULV4 474 aaPredicted RBP11.85□□□□□ -0.51
SS18-225ENST00000585121 HYKKA2RU49 373 aa11.84□□□□□ -0.51
SS18-225ENST00000585121 A6NL46 340 aa11.84□□□□□ -0.51
SS18-225ENST00000585121 E7ENX8 843 aa11.84□□□□□ -0.51
SS18-225ENST00000585121 TXNDC9O14530 226 aa11.84□□□□□ -0.51
SS18-225ENST00000585121 SEC31AO94979 1220 aaKnown RBP11.84□□□□□ -0.51
SS18-225ENST00000585121 HIST1H2AGP0C0S8 130 aaPredicted RBP11.84□□□□□ -0.51
SS18-225ENST00000585121 HIST1H2ADP20671 130 aa11.84□□□□□ -0.51
SS18-225ENST00000585121 ITGAXP20702 1163 aa11.84□□□□□ -0.51
SS18-225ENST00000585121 HRH2P25021 359 aa11.84□□□□□ -0.51
SS18-225ENST00000585121 CASQ1P31415 396 aa11.84□□□□□ -0.51
SS18-225ENST00000585121 GCGRP47871 477 aa11.84□□□□□ -0.51
SS18-225ENST00000585121 TAP2Q03519 686 aa11.84□□□□□ -0.51
SS18-225ENST00000585121 SP140Q13342 867 aa11.84□□□□□ -0.51
SS18-225ENST00000585121 HP1BP3Q5SSJ5 553 aaPredicted RBP11.84□□□□□ -0.51
SS18-225ENST00000585121 TEDDM1Q5T9Z0 273 aa11.84□□□□□ -0.51
SS18-225ENST00000585121 FRMPD2BQ6IN97 320 aa11.84□□□□□ -0.51
SS18-225ENST00000585121 PRMT9Q6P2P2 845 aa11.84□□□□□ -0.51
SS18-225ENST00000585121 MAATS1Q7Z4T9 603 aa11.84□□□□□ -0.51
SS18-225ENST00000585121 MRGPREQ86SM8 312 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms