RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 GRM7Q14831 915 aa19.58■□□□□ 0.72
SS18-224ENST00000584083 SLC9A5Q14940 896 aa19.58■□□□□ 0.72
SS18-224ENST00000584083 NKAIN1Q4KMZ8 207 aa19.58■□□□□ 0.72
SS18-224ENST00000584083 PAQR3Q6TCH7 311 aa19.58■□□□□ 0.72
SS18-224ENST00000584083 TTLL10Q6ZVT0 673 aa19.58■□□□□ 0.72
SS18-224ENST00000584083 PTRH1Q86Y79 214 aaKnown RBP19.58■□□□□ 0.72
SS18-224ENST00000584083 PALM2Q8IXS6 379 aa19.58■□□□□ 0.72
SS18-224ENST00000584083 GPATCH11Q8N954 259 aa19.58■□□□□ 0.72
SS18-224ENST00000584083 PPFIBP2Q8ND30 876 aa19.58■□□□□ 0.72
SS18-224ENST00000584083 FBXO36Q8NEA4 188 aa19.58■□□□□ 0.72
SS18-224ENST00000584083 ZNF480Q8WV37 535 aa19.58■□□□□ 0.72
SS18-224ENST00000584083 EEF1AKMT1Q8WVE0 214 aa19.58■□□□□ 0.72
SS18-224ENST00000584083 ERP44Q9BS26 406 aa19.58■□□□□ 0.72
SS18-224ENST00000584083 DHRS4Q9BTZ2 278 aa19.58■□□□□ 0.72
SS18-224ENST00000584083 SLC6A20Q9NP91 592 aa19.58■□□□□ 0.72
SS18-224ENST00000584083 TAC3Q9UHF0 121 aa19.58■□□□□ 0.72
SS18-224ENST00000584083 KLK4Q9Y5K2 254 aa19.58■□□□□ 0.72
SS18-224ENST00000584083 MDC1Q14676 2089 aaKnown RBP19.57■□□□□ 0.72
SS18-224ENST00000584083 A0A0J9YVX5 310 aa19.57■□□□□ 0.72
SS18-224ENST00000584083 ARGFXA6NJG6 315 aa19.57■□□□□ 0.72
SS18-224ENST00000584083 SRPX2O60687 465 aaPredicted RBP19.57■□□□□ 0.72
SS18-224ENST00000584083 CCNDBP1O95273 360 aa19.57■□□□□ 0.72
SS18-224ENST00000584083 TIAL1Q01085 375 aaKnown RBP eCLIP19.57■□□□□ 0.72
SS18-224ENST00000584083 MGAT5Q09328 741 aa19.57■□□□□ 0.72
SS18-224ENST00000584083 FASTKD3Q14CZ7 662 aaKnown RBP19.57■□□□□ 0.72
SS18-224ENST00000584083 THEMIS2Q5TEJ8 643 aa19.57■□□□□ 0.72
SS18-224ENST00000584083 GALNT7Q86SF2 657 aa19.57■□□□□ 0.72
SS18-224ENST00000584083 APLFQ8IW19 511 aaPredicted RBP19.57■□□□□ 0.72
SS18-224ENST00000584083 MYO1HQ8N1T3 1032 aa19.57■□□□□ 0.72
SS18-224ENST00000584083 TTC29Q8NA56 475 aaPredicted RBP19.57■□□□□ 0.72
SS18-224ENST00000584083 MCOLN3Q8TDD5 553 aa19.57■□□□□ 0.72
SS18-224ENST00000584083 ZFATQ9P243 1243 aa19.57■□□□□ 0.72
SS18-224ENST00000584083 MED13Q9UHV7 2174 aa19.57■□□□□ 0.72
SS18-224ENST00000584083 E7ENX8 843 aa19.56■□□□□ 0.72
SS18-224ENST00000584083 RAD51CO43502 376 aa19.56■□□□□ 0.72
SS18-224ENST00000584083 NRP2O60462 931 aa19.56■□□□□ 0.72
SS18-224ENST00000584083 EIF2S1P05198 315 aaKnown RBP19.56■□□□□ 0.72
SS18-224ENST00000584083 CD63P08962 238 aa19.56■□□□□ 0.72
SS18-224ENST00000584083 TAP2Q03519 686 aa19.56■□□□□ 0.72
SS18-224ENST00000584083 CHAF1BQ13112 559 aa19.56■□□□□ 0.72
SS18-224ENST00000584083 PDAP1Q13442 181 aaKnown RBP19.56■□□□□ 0.72
SS18-224ENST00000584083 LACTB2Q53H82 288 aaPredicted RBP19.56■□□□□ 0.72
SS18-224ENST00000584083 WASHC2DQ5SRD0 308 aa19.56■□□□□ 0.72
SS18-224ENST00000584083 HECTD2Q5U5R9 776 aa19.56■□□□□ 0.72
SS18-224ENST00000584083 YOD1Q5VVQ6 348 aaPredicted RBP19.56■□□□□ 0.72
SS18-224ENST00000584083 ICE2Q659A1 982 aa19.56■□□□□ 0.72
SS18-224ENST00000584083 FRMPD2BQ6IN97 320 aa19.56■□□□□ 0.72
SS18-224ENST00000584083 ZBED8Q8IZ13 594 aa19.56■□□□□ 0.72
SS18-224ENST00000584083 ADAMTS17Q8TE56 1095 aa19.56■□□□□ 0.72
SS18-224ENST00000584083 LINGO1Q96FE5 620 aa19.56■□□□□ 0.72
SS18-224ENST00000584083 CUTCQ9NTM9 273 aa19.56■□□□□ 0.72
SS18-224ENST00000584083 UTP6Q9NYH9 597 aaKnown RBP19.56■□□□□ 0.72
SS18-224ENST00000584083 WHRNQ9P202 907 aa19.56■□□□□ 0.72
SS18-224ENST00000584083 TLK1Q9UKI8 766 aa19.56■□□□□ 0.72
SS18-224ENST00000584083 CORO1CQ9ULV4 474 aaPredicted RBP19.56■□□□□ 0.72
SS18-224ENST00000584083 VWA7Q9Y334 891 aa19.56■□□□□ 0.72
SS18-224ENST00000584083 PTRH2Q9Y3E5 179 aaKnown RBP19.56■□□□□ 0.72
SS18-224ENST00000584083 A0A1B0GX78 115 aa19.55■□□□□ 0.72
SS18-224ENST00000584083 OR2A25A4D2G3 310 aa19.55■□□□□ 0.72
SS18-224ENST00000584083 E7ESA3 106 aa19.55■□□□□ 0.72
SS18-224ENST00000584083 J3QKU1 62 aa19.55■□□□□ 0.72
SS18-224ENST00000584083 DSCR3O14972 297 aa19.55■□□□□ 0.72
SS18-224ENST00000584083 DNAJB5O75953 348 aa19.55■□□□□ 0.72
SS18-224ENST00000584083 C8GP07360 202 aa19.55■□□□□ 0.72
SS18-224ENST00000584083 OTX2P32243 289 aa19.55■□□□□ 0.72
SS18-224ENST00000584083 FOLR3P41439 243 aa19.55■□□□□ 0.72
SS18-224ENST00000584083 IL2P60568 153 aa19.55■□□□□ 0.72
SS18-224ENST00000584083 PRDX1Q06830 199 aaKnown RBP19.55■□□□□ 0.72
SS18-224ENST00000584083 FRG1Q14331 258 aaKnown RBP19.55■□□□□ 0.72
SS18-224ENST00000584083 FAM214AQ32MH5 1076 aa19.55■□□□□ 0.72
SS18-224ENST00000584083 CPZQ66K79 652 aa19.55■□□□□ 0.72
SS18-224ENST00000584083 FAM45BPQ6NSW5 357 aa19.55■□□□□ 0.72
SS18-224ENST00000584083 RNF44Q7L0R7 432 aa19.55■□□□□ 0.72
SS18-224ENST00000584083 RAB43Q86YS6 212 aa19.55■□□□□ 0.72
SS18-224ENST00000584083 FAM45AQ8TCE6 357 aa19.55■□□□□ 0.72
SS18-224ENST00000584083 ZNF285Q96NJ3 590 aa19.55■□□□□ 0.72
SS18-224ENST00000584083 ZFYVE21Q9BQ24 234 aa19.55■□□□□ 0.72
SS18-224ENST00000584083 PLCD4Q9BRC7 762 aa19.55■□□□□ 0.72
SS18-224ENST00000584083 TRIM55Q9BYV6 548 aa19.55■□□□□ 0.72
SS18-224ENST00000584083 ING2Q9H160 280 aa19.55■□□□□ 0.72
SS18-224ENST00000584083 ACSS2Q9NR19 701 aa19.55■□□□□ 0.72
SS18-224ENST00000584083 ANKMY1Q9P2S6 941 aa19.55■□□□□ 0.72
SS18-224ENST00000584083 ADAMTS6Q9UKP5 1117 aa19.55■□□□□ 0.72
SS18-224ENST00000584083 TP53TG5Q9Y2B4 290 aa19.55■□□□□ 0.72
SS18-224ENST00000584083 GCN1Q92616 2671 aaKnown RBP19.55■□□□□ 0.72
SS18-224ENST00000584083 LOC105369274A0A096LPK9 316 aa19.54■□□□□ 0.72
SS18-224ENST00000584083 LOC102723532A0A0G2JNH3 316 aa19.54■□□□□ 0.72
SS18-224ENST00000584083 HYKKA2RU49 373 aa19.54■□□□□ 0.72
SS18-224ENST00000584083 KLF7O75840 302 aaPredicted RBP19.54■□□□□ 0.72
SS18-224ENST00000584083 PIM1P11309 404 aaPredicted RBP19.54■□□□□ 0.72
SS18-224ENST00000584083 IMPA1P29218 277 aa19.54■□□□□ 0.72
SS18-224ENST00000584083 GCGRP47871 477 aa19.54■□□□□ 0.72
SS18-224ENST00000584083 CCL11P51671 97 aa19.54■□□□□ 0.72
SS18-224ENST00000584083 ABATP80404 500 aa19.54■□□□□ 0.72
SS18-224ENST00000584083 FBXO42Q6P3S6 717 aa19.54■□□□□ 0.72
SS18-224ENST00000584083 ATG14Q6ZNE5 492 aa19.54■□□□□ 0.72
SS18-224ENST00000584083 CAPN12Q6ZSI9 719 aa19.54■□□□□ 0.72
SS18-224ENST00000584083 ADCK2Q7Z695 626 aa19.54■□□□□ 0.72
SS18-224ENST00000584083 OR4N4Q8N0Y3 316 aa19.54■□□□□ 0.72
SS18-224ENST00000584083 PYROXD1Q8WU10 500 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms