RNA–Protein interactions for RNA: ENST00000583741.1

SRSF1-206, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5

Gene SRSF1, Length 1,465 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-206ENST00000583741 ZNF140P52738 457 aaPredicted RBP19.72■□□□□ 0.75
SRSF1-206ENST00000583741 TMPRSS15P98073 1019 aa19.72■□□□□ 0.75
SRSF1-206ENST00000583741 PRKG2Q13237 762 aa19.72■□□□□ 0.75
SRSF1-206ENST00000583741 SSPNQ14714 243 aa19.72■□□□□ 0.75
SRSF1-206ENST00000583741 ZIC1Q15915 447 aa19.72■□□□□ 0.75
SRSF1-206ENST00000583741 TSTD2Q5T7W7 516 aa19.72■□□□□ 0.75
SRSF1-206ENST00000583741 LYPLAL1Q5VWZ2 237 aa19.72■□□□□ 0.75
SRSF1-206ENST00000583741 SPESP1Q6UW49 350 aa19.72■□□□□ 0.75
SRSF1-206ENST00000583741 TICAM1Q8IUC6 712 aa19.72■□□□□ 0.75
SRSF1-206ENST00000583741 GPR135Q8IZ08 494 aa19.72■□□□□ 0.75
SRSF1-206ENST00000583741 ULK4Q96C45 1275 aa19.72■□□□□ 0.75
SRSF1-206ENST00000583741 FER1L6-AS2Q96M78 137 aa19.72■□□□□ 0.75
SRSF1-206ENST00000583741 GBP5Q96PP8 586 aa19.72■□□□□ 0.75
SRSF1-206ENST00000583741 BARD1Q99728 777 aaKnown RBP19.72■□□□□ 0.75
SRSF1-206ENST00000583741 NFS1Q9Y697 457 aa19.72■□□□□ 0.75
SRSF1-206ENST00000583741 APCP25054 2843 aa19.71■□□□□ 0.75
SRSF1-206ENST00000583741 CNTRLQ7Z7A1 2325 aa19.71■□□□□ 0.75
SRSF1-206ENST00000583741 ZCWPW2A0A1B0GU75 182 aa19.71■□□□□ 0.75
SRSF1-206ENST00000583741 EXOC1LA0A1B0GW35 172 aa19.71■□□□□ 0.75
SRSF1-206ENST00000583741 IFRD1O00458 451 aaPredicted RBP19.71■□□□□ 0.75
SRSF1-206ENST00000583741 OR2B3O76000 313 aa19.71■□□□□ 0.75
SRSF1-206ENST00000583741 ALPPP05187 535 aa19.71■□□□□ 0.75
SRSF1-206ENST00000583741 PAMP19021 973 aa19.71■□□□□ 0.75
SRSF1-206ENST00000583741 FOLR3P41439 243 aa19.71■□□□□ 0.75
SRSF1-206ENST00000583741 GABRA4P48169 554 aa19.71■□□□□ 0.75
SRSF1-206ENST00000583741 CDKN1CP49918 316 aaPredicted RBP19.71■□□□□ 0.75
SRSF1-206ENST00000583741 BOP1Q14137 746 aaKnown RBP19.71■□□□□ 0.75
SRSF1-206ENST00000583741 SLC9A5Q14940 896 aa19.71■□□□□ 0.75
SRSF1-206ENST00000583741 RHBDD2Q6NTF9 364 aa19.71■□□□□ 0.75
SRSF1-206ENST00000583741 TRMT10BQ6PF06 316 aaKnown RBP19.71■□□□□ 0.75
SRSF1-206ENST00000583741 C19orf47Q8N9M1 422 aaKnown RBP19.71■□□□□ 0.75
SRSF1-206ENST00000583741 PEX13Q92968 403 aa19.71■□□□□ 0.75
SRSF1-206ENST00000583741 CERS2Q96G23 380 aa19.71■□□□□ 0.75
SRSF1-206ENST00000583741 IP6K3Q96PC2 410 aa19.71■□□□□ 0.75
SRSF1-206ENST00000583741 CYTH2Q99418 400 aa19.71■□□□□ 0.75
SRSF1-206ENST00000583741 SPRTNQ9H040 489 aaPredicted RBP19.71■□□□□ 0.75
SRSF1-206ENST00000583741 MVB12BQ9H7P6 319 aa19.71■□□□□ 0.75
SRSF1-206ENST00000583741 TREX1Q9NSU2 369 aa19.71■□□□□ 0.75
SRSF1-206ENST00000583741 P4HTMQ9NXG6 502 aa19.71■□□□□ 0.75
SRSF1-206ENST00000583741 ICKQ9UPZ9 632 aa19.71■□□□□ 0.75
SRSF1-206ENST00000583741 CDYLQ9Y232 598 aa19.71■□□□□ 0.75
SRSF1-206ENST00000583741 OTOGQ6ZRI0 2925 aa19.71■□□□□ 0.75
SRSF1-206ENST00000583741 CFAP99D6REC4 459 aa19.7■□□□□ 0.74
SRSF1-206ENST00000583741 ITGALP20701 1170 aa19.7■□□□□ 0.74
SRSF1-206ENST00000583741 CD151P48509 253 aa19.7■□□□□ 0.74
SRSF1-206ENST00000583741 ZNF844Q08AG5 666 aa19.7■□□□□ 0.74
SRSF1-206ENST00000583741 FRG1Q14331 258 aaKnown RBP19.7■□□□□ 0.74
SRSF1-206ENST00000583741 KLHL38Q2WGJ6 581 aa19.7■□□□□ 0.74
SRSF1-206ENST00000583741 CYS1Q717R9 158 aa19.7■□□□□ 0.74
SRSF1-206ENST00000583741 PPP1R32Q7Z5V6 425 aa19.7■□□□□ 0.74
SRSF1-206ENST00000583741 SNX20Q7Z614 316 aa19.7■□□□□ 0.74
SRSF1-206ENST00000583741 CUZD1Q86UP6 607 aa19.7■□□□□ 0.74
SRSF1-206ENST00000583741 OR2Y1Q8NGV0 311 aa19.7■□□□□ 0.74
SRSF1-206ENST00000583741 PPANQ9NQ55 473 aaKnown RBP19.7■□□□□ 0.74
SRSF1-206ENST00000583741 MOCS1Q9NZB8 636 aa19.7■□□□□ 0.74
SRSF1-206ENST00000583741 DHCR7Q9UBM7 475 aaKnown RBP19.7■□□□□ 0.74
SRSF1-206ENST00000583741 SLC2A6Q9UGQ3 507 aa19.7■□□□□ 0.74
SRSF1-206ENST00000583741 PCDHGA10Q9Y5H3 936 aa19.7■□□□□ 0.74
SRSF1-206ENST00000583741 COPG1Q9Y678 874 aaKnown RBP19.7■□□□□ 0.74
SRSF1-206ENST00000583741 IGLV3-16A0A075B6K0 115 aa19.69■□□□□ 0.74
SRSF1-206ENST00000583741 PEX12O00623 359 aa19.69■□□□□ 0.74
SRSF1-206ENST00000583741 UMODP07911 640 aa19.69■□□□□ 0.74
SRSF1-206ENST00000583741 PRSS56P0CW18 603 aa19.69■□□□□ 0.74
SRSF1-206ENST00000583741 UGT2B7P16662 529 aa19.69■□□□□ 0.74
SRSF1-206ENST00000583741 EFTUD2Q15029 972 aaKnown RBP eCLIP19.69■□□□□ 0.744e-14■■□□□ 12.8
SRSF1-206ENST00000583741 LONRF1Q17RB8 773 aa19.69■□□□□ 0.74
SRSF1-206ENST00000583741 KBTBD12Q3ZCT8 623 aa19.69■□□□□ 0.74
SRSF1-206ENST00000583741 CEP85LQ5SZL2 805 aa19.69■□□□□ 0.74
SRSF1-206ENST00000583741 C1QL3Q5VWW1 255 aa19.69■□□□□ 0.74
SRSF1-206ENST00000583741 KIAA0930Q6ICG6 404 aaPredicted RBP19.69■□□□□ 0.74
SRSF1-206ENST00000583741 Q6ZS92 163 aa19.69■□□□□ 0.74
SRSF1-206ENST00000583741 STYXQ8WUJ0 223 aa19.69■□□□□ 0.74
SRSF1-206ENST00000583741 TFGQ92734 400 aaPredicted RBP19.69■□□□□ 0.74
SRSF1-206ENST00000583741 N4BP2L2Q92802 583 aaPredicted RBP19.69■□□□□ 0.74
SRSF1-206ENST00000583741 ZBTB9Q96C00 473 aa19.69■□□□□ 0.74
SRSF1-206ENST00000583741 C17orf62Q9BQA9 187 aa19.69■□□□□ 0.74
SRSF1-206ENST00000583741 GPN3Q9UHW5 284 aaPredicted RBP19.69■□□□□ 0.74
SRSF1-206ENST00000583741 RIMKLBQ9ULI2 386 aa19.69■□□□□ 0.74
SRSF1-206ENST00000583741 CSAG2Q9Y5P2 127 aa19.69■□□□□ 0.74
SRSF1-206ENST00000583741 AP1M2Q9Y6Q5 423 aa19.69■□□□□ 0.74
SRSF1-206ENST00000583741 SVILO95425 2214 aa19.69■□□□□ 0.74
SRSF1-206ENST00000583741 CSMD2Q7Z408 3487 aa19.68■□□□□ 0.74
SRSF1-206ENST00000583741 DCDP81605 110 aaKnown RBP19.68■□□□□ 0.74
SRSF1-206ENST00000583741 ACVR1Q04771 509 aa19.68■□□□□ 0.74
SRSF1-206ENST00000583741 MGAT5Q09328 741 aa19.68■□□□□ 0.74
SRSF1-206ENST00000583741 MRPL14Q6P1L8 145 aaKnown RBP19.68■□□□□ 0.74
SRSF1-206ENST00000583741 KCNMB4Q86W47 210 aa19.68■□□□□ 0.74
SRSF1-206ENST00000583741 CLDN19Q8N6F1 224 aa19.68■□□□□ 0.74
SRSF1-206ENST00000583741 OR5AR1Q8NGP9 310 aa19.68■□□□□ 0.74
SRSF1-206ENST00000583741 OR13J1Q8NGT2 312 aa19.68■□□□□ 0.74
SRSF1-206ENST00000583741 FLVCR1-AS1Q8TAF5 88 aa19.68■□□□□ 0.74
SRSF1-206ENST00000583741 PROKR1Q8TCW9 393 aa19.68■□□□□ 0.74
SRSF1-206ENST00000583741 CDKL2Q92772 493 aa19.68■□□□□ 0.74
SRSF1-206ENST00000583741 DNAJC1Q96KC8 554 aaKnown RBP19.68■□□□□ 0.74
SRSF1-206ENST00000583741 OR2A14Q96R47 310 aa19.68■□□□□ 0.74
SRSF1-206ENST00000583741 C20orf96Q9NUD7 363 aaPredicted RBP19.68■□□□□ 0.74
SRSF1-206ENST00000583741 NLE1Q9NVX2 485 aaPredicted RBP19.68■□□□□ 0.74
SRSF1-206ENST00000583741 SPHK1Q9NYA1 384 aa19.68■□□□□ 0.74
SRSF1-206ENST00000583741 ZDHHC3Q9NYG2 299 aa19.68■□□□□ 0.74
SRSF1-206ENST00000583741 IL1RAPL1Q9NZN1 696 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms