RNA–Protein interactions for RNA: ENST00000580784.5

CSNK1D-215, Transcript of casein kinase 1 delta, humanhuman

TSL 1 (best)

Gene CSNK1D, Length 1,081 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-215ENST00000580784 ERGP11308 486 aa20.36■□□□□ 0.85
CSNK1D-215ENST00000580784 CMPK1P30085 196 aa20.36■□□□□ 0.85
CSNK1D-215ENST00000580784 FNTAP49354 379 aa20.36■□□□□ 0.85
CSNK1D-215ENST00000580784 SRSF1Q07955 248 aaKnown RBP eCLIP20.36■□□□□ 0.85
CSNK1D-215ENST00000580784 TSTA3Q13630 321 aaPredicted RBP20.36■□□□□ 0.85
CSNK1D-215ENST00000580784 NKG7Q16617 165 aa20.36■□□□□ 0.85
CSNK1D-215ENST00000580784 PPIL6Q8IXY8 311 aa20.36■□□□□ 0.85
CSNK1D-215ENST00000580784 RBMXL3Q8N7X1 1067 aaKnown RBP20.36■□□□□ 0.85
CSNK1D-215ENST00000580784 SMPDL3AQ92484 453 aa20.36■□□□□ 0.85
CSNK1D-215ENST00000580784 CCDC68Q9H2F9 335 aa20.36■□□□□ 0.85
CSNK1D-215ENST00000580784 GRPEL1Q9HAV7 217 aa20.36■□□□□ 0.85
CSNK1D-215ENST00000580784 FAM114A2Q9NRY5 505 aa20.36■□□□□ 0.85
CSNK1D-215ENST00000580784 STOX2Q9P2F5 926 aaPredicted RBP20.36■□□□□ 0.85
CSNK1D-215ENST00000580784 SNX12Q9UMY4 172 aa20.36■□□□□ 0.85
CSNK1D-215ENST00000580784 GOLGA6L10A0A0M3HER8 536 aa20.35■□□□□ 0.85
CSNK1D-215ENST00000580784 OR2A25A4D2G3 310 aa20.35■□□□□ 0.85
CSNK1D-215ENST00000580784 CYSRT1A8MQ03 144 aa20.35■□□□□ 0.85
CSNK1D-215ENST00000580784 HAUS5O94927 633 aa20.35■□□□□ 0.85
CSNK1D-215ENST00000580784 EIF2S1P05198 315 aaKnown RBP20.35■□□□□ 0.85
CSNK1D-215ENST00000580784 RPA3P35244 121 aaPredicted RBP20.35■□□□□ 0.85
CSNK1D-215ENST00000580784 PPP1R7Q15435 360 aa20.35■□□□□ 0.85
CSNK1D-215ENST00000580784 TTLL9Q3SXZ7 439 aa20.35■□□□□ 0.85
CSNK1D-215ENST00000580784 HSP90AA5PQ58FG0 334 aa20.35■□□□□ 0.85
CSNK1D-215ENST00000580784 RNASEH2BQ5TBB1 312 aaKnown RBP20.35■□□□□ 0.85
CSNK1D-215ENST00000580784 CYHR1Q6ZMK1 362 aa20.35■□□□□ 0.85
CSNK1D-215ENST00000580784 SHISA6Q6ZSJ9 500 aa20.35■□□□□ 0.85
CSNK1D-215ENST00000580784 NEK10Q6ZWH5 1172 aa20.35■□□□□ 0.85
CSNK1D-215ENST00000580784 RNF44Q7L0R7 432 aa20.35■□□□□ 0.85
CSNK1D-215ENST00000580784 HPS6Q86YV9 775 aa20.35■□□□□ 0.85
CSNK1D-215ENST00000580784 GALNT16Q8N428 558 aa20.35■□□□□ 0.85
CSNK1D-215ENST00000580784 PPFIBP2Q8ND30 876 aa20.35■□□□□ 0.85
CSNK1D-215ENST00000580784 SPSB2Q99619 263 aa20.35■□□□□ 0.85
CSNK1D-215ENST00000580784 SLC26A1Q9H2B4 701 aa20.35■□□□□ 0.85
CSNK1D-215ENST00000580784 KCNF1Q9H3M0 494 aa20.35■□□□□ 0.85
CSNK1D-215ENST00000580784 WDR54Q9H977 334 aa20.35■□□□□ 0.85
CSNK1D-215ENST00000580784 KLHL42Q9P2K6 505 aa20.35■□□□□ 0.85
CSNK1D-215ENST00000580784 CTSFQ9UBX1 484 aa20.35■□□□□ 0.85
CSNK1D-215ENST00000580784 FBXO5Q9UKT4 447 aa20.35■□□□□ 0.85
CSNK1D-215ENST00000580784 DHRS7Q9Y394 339 aa20.35■□□□□ 0.85
CSNK1D-215ENST00000580784 MAP4K5Q9Y4K4 846 aa20.35■□□□□ 0.85
CSNK1D-215ENST00000580784 MAU2Q9Y6X3 613 aa20.35■□□□□ 0.85
CSNK1D-215ENST00000580784 FAM169AQ9Y6X4 670 aa20.35■□□□□ 0.85
CSNK1D-215ENST00000580784 USP9XQ93008 2570 aaPredicted RBP20.34■□□□□ 0.85
CSNK1D-215ENST00000580784 CLEC18AA5D8T8 446 aa20.34■□□□□ 0.85
CSNK1D-215ENST00000580784 AGPSO00116 658 aa20.34■□□□□ 0.85
CSNK1D-215ENST00000580784 SLC16A8O95907 504 aa20.34■□□□□ 0.85
CSNK1D-215ENST00000580784 IGHEP01854 428 aa20.34■□□□□ 0.85
CSNK1D-215ENST00000580784 MMP11P24347 488 aa20.34■□□□□ 0.85
CSNK1D-215ENST00000580784 PNLIPRP1P54315 467 aa20.34■□□□□ 0.85
CSNK1D-215ENST00000580784 MPP1Q00013 466 aa20.34■□□□□ 0.85
CSNK1D-215ENST00000580784 MYBPC3Q14896 1274 aa20.34■□□□□ 0.85
CSNK1D-215ENST00000580784 ARHGAP19Q14CB8 494 aa20.34■□□□□ 0.85
CSNK1D-215ENST00000580784 SLC6A19Q695T7 634 aa20.34■□□□□ 0.85
CSNK1D-215ENST00000580784 CLEC18BQ6UXF7 455 aa20.34■□□□□ 0.85
CSNK1D-215ENST00000580784 LMNTD2Q8IXW0 634 aa20.34■□□□□ 0.85
CSNK1D-215ENST00000580784 EFCAB3Q8N7B9 438 aa20.34■□□□□ 0.85
CSNK1D-215ENST00000580784 Q8NA96 180 aa20.34■□□□□ 0.85
CSNK1D-215ENST00000580784 SERBP1Q8NC51 408 aaKnown RBP eCLIP20.34■□□□□ 0.85
CSNK1D-215ENST00000580784 CLEC18CQ8NCF0 446 aa20.34■□□□□ 0.85
CSNK1D-215ENST00000580784 CALML6Q8TD86 181 aa20.34■□□□□ 0.85
CSNK1D-215ENST00000580784 ZNF480Q8WV37 535 aa20.34■□□□□ 0.85
CSNK1D-215ENST00000580784 ASB11Q8WXH4 323 aa20.34■□□□□ 0.85
CSNK1D-215ENST00000580784 KCNJ9Q92806 393 aa20.34■□□□□ 0.85
CSNK1D-215ENST00000580784 INPP5DQ92835 1189 aa20.34■□□□□ 0.85
CSNK1D-215ENST00000580784 GPR21Q99679 349 aa20.34■□□□□ 0.85
CSNK1D-215ENST00000580784 ZFYVE21Q9BQ24 234 aa20.34■□□□□ 0.85
CSNK1D-215ENST00000580784 DDX47Q9H0S4 455 aaKnown RBP20.34■□□□□ 0.85
CSNK1D-215ENST00000580784 SOX17Q9H6I2 414 aaPredicted RBP20.34■□□□□ 0.85
CSNK1D-215ENST00000580784 ZNF552Q9H707 407 aaPredicted RBP20.34■□□□□ 0.85
CSNK1D-215ENST00000580784 MRPS30Q9NP92 439 aaKnown RBP20.34■□□□□ 0.85
CSNK1D-215ENST00000580784 ATP13A2Q9NQ11 1180 aa20.34■□□□□ 0.85
CSNK1D-215ENST00000580784 IARS2Q9NSE4 1012 aaKnown RBP20.34■□□□□ 0.85
CSNK1D-215ENST00000580784 C5AR2Q9P296 337 aa20.34■□□□□ 0.85
CSNK1D-215ENST00000580784 CDC23Q9UJX2 597 aa20.34■□□□□ 0.85
CSNK1D-215ENST00000580784 IGKV1-8A0A0C4DH67 115 aa20.33■□□□□ 0.85
CSNK1D-215ENST00000580784 CES2O00748 559 aa20.33■□□□□ 0.85
CSNK1D-215ENST00000580784 VPS4BO75351 444 aa20.33■□□□□ 0.85
CSNK1D-215ENST00000580784 SYF2O95926 243 aaKnown RBP20.33■□□□□ 0.85
CSNK1D-215ENST00000580784 MPC1LP0DKB6 136 aa20.33■□□□□ 0.85
CSNK1D-215ENST00000580784 UQCRFS1P47985 274 aa20.33■□□□□ 0.85
CSNK1D-215ENST00000580784 PRR30Q53SZ7 412 aaPredicted RBP20.33■□□□□ 0.85
CSNK1D-215ENST00000580784 VWA5B1Q5TIE3 1220 aa20.33■□□□□ 0.85
CSNK1D-215ENST00000580784 PLCD4Q9BRC7 762 aa20.33■□□□□ 0.85
CSNK1D-215ENST00000580784 SYNPO2LQ9H987 977 aa20.33■□□□□ 0.85
CSNK1D-215ENST00000580784 ZNF304Q9HCX3 659 aa20.33■□□□□ 0.85
CSNK1D-215ENST00000580784 SLAMF7Q9NQ25 335 aa20.33■□□□□ 0.85
CSNK1D-215ENST00000580784 ABCF3Q9NUQ8 709 aa20.33■□□□□ 0.85
CSNK1D-215ENST00000580784 TAC3Q9UHF0 121 aa20.33■□□□□ 0.85
CSNK1D-215ENST00000580784 VPS4AQ9UN37 437 aa20.33■□□□□ 0.85
CSNK1D-215ENST00000580784 E7ENX8 843 aa20.32■□□□□ 0.84
CSNK1D-215ENST00000580784 H0YGG7 62 aa20.32■□□□□ 0.84
CSNK1D-215ENST00000580784 GFYI3L273 518 aa20.32■□□□□ 0.84
CSNK1D-215ENST00000580784 SOCS6O14544 535 aa20.32■□□□□ 0.84
CSNK1D-215ENST00000580784 ALOX12BO75342 701 aa20.32■□□□□ 0.84
CSNK1D-215ENST00000580784 BANF1O75531 89 aa20.32■□□□□ 0.84
CSNK1D-215ENST00000580784 GNLYP22749 145 aa20.32■□□□□ 0.84
CSNK1D-215ENST00000580784 HSD17B2P37059 387 aa20.32■□□□□ 0.84
CSNK1D-215ENST00000580784 SOX8P57073 446 aa20.32■□□□□ 0.84
CSNK1D-215ENST00000580784 ARF3P61204 181 aaPredicted RBP20.32■□□□□ 0.84
CSNK1D-215ENST00000580784 TAP2Q03519 686 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms