RNA–Protein interactions for RNA: ENST00000578044.5

SMARCE1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,184 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-213ENST00000578044 SVILO95425 2214 aa13.87□□□□□ -0.19
SMARCE1-213ENST00000578044 UTP20O75691 2785 aaKnown RBP13.87□□□□□ -0.19
SMARCE1-213ENST00000578044 ZCWPW2A0A1B0GU75 182 aa13.86□□□□□ -0.19
SMARCE1-213ENST00000578044 TCRBV7S3A2A0A539 114 aa13.86□□□□□ -0.19
SMARCE1-213ENST00000578044 VPS26AO75436 327 aa13.86□□□□□ -0.19
SMARCE1-213ENST00000578044 DDAH2O95865 285 aa13.86□□□□□ -0.19
SMARCE1-213ENST00000578044 KRT14P02533 472 aa13.86□□□□□ -0.19
SMARCE1-213ENST00000578044 MPC1LP0DKB6 136 aa13.86□□□□□ -0.19
SMARCE1-213ENST00000578044 ALAS2P22557 587 aa13.86□□□□□ -0.19
SMARCE1-213ENST00000578044 FDXRP22570 491 aa13.86□□□□□ -0.19
SMARCE1-213ENST00000578044 SKIV2L2P42285 1042 aaKnown RBP13.86□□□□□ -0.19
SMARCE1-213ENST00000578044 FNTAP49354 379 aa13.86□□□□□ -0.19
SMARCE1-213ENST00000578044 CLCN7P51798 805 aa13.86□□□□□ -0.19
SMARCE1-213ENST00000578044 PRDX1Q06830 199 aaKnown RBP13.86□□□□□ -0.19
SMARCE1-213ENST00000578044 WASHC2DQ5SRD0 308 aa13.86□□□□□ -0.19
SMARCE1-213ENST00000578044 PRAMEF13Q5VWM6 474 aa13.86□□□□□ -0.19
SMARCE1-213ENST00000578044 ZNF425Q6IV72 752 aa13.86□□□□□ -0.19
SMARCE1-213ENST00000578044 ZGRF1Q86YA3 2104 aa13.86□□□□□ -0.19
SMARCE1-213ENST00000578044 GABPB2Q8TAK5 448 aaPredicted RBP13.86□□□□□ -0.19
SMARCE1-213ENST00000578044 ACTRT1Q8TDG2 376 aa13.86□□□□□ -0.19
SMARCE1-213ENST00000578044 PPP4R1Q8TF05 950 aa13.86□□□□□ -0.19
SMARCE1-213ENST00000578044 GRK7Q8WTQ7 553 aa13.86□□□□□ -0.19
SMARCE1-213ENST00000578044 ASB11Q8WXH4 323 aa13.86□□□□□ -0.19
SMARCE1-213ENST00000578044 PLCD4Q9BRC7 762 aa13.86□□□□□ -0.19
SMARCE1-213ENST00000578044 FAM129AQ9BZQ8 928 aa13.86□□□□□ -0.19
SMARCE1-213ENST00000578044 TGIF2Q9GZN2 237 aa13.86□□□□□ -0.19
SMARCE1-213ENST00000578044 IRAK4Q9NWZ3 460 aa13.86□□□□□ -0.19
SMARCE1-213ENST00000578044 NFS1Q9Y697 457 aa13.86□□□□□ -0.19
SMARCE1-213ENST00000578044 TEX15Q9BXT5 2789 aa13.86□□□□□ -0.19
SMARCE1-213ENST00000578044 DIDO1Q9BTC0 2240 aaKnown RBP13.86□□□□□ -0.19
SMARCE1-213ENST00000578044 NBPF19A0A087WUL8 3843 aa13.85□□□□□ -0.19
SMARCE1-213ENST00000578044 HYKKA2RU49 373 aa13.85□□□□□ -0.19
SMARCE1-213ENST00000578044 ARHGEF33A8MVX0 844 aa13.85□□□□□ -0.19
SMARCE1-213ENST00000578044 E5RI56 91 aa13.85□□□□□ -0.19
SMARCE1-213ENST00000578044 SOCS6O14544 535 aa13.85□□□□□ -0.19
SMARCE1-213ENST00000578044 NIPSNAP2O75323 286 aa13.85□□□□□ -0.19
SMARCE1-213ENST00000578044 EZRP15311 586 aaKnown RBP13.85□□□□□ -0.19
SMARCE1-213ENST00000578044 CHRM3P20309 590 aa13.85□□□□□ -0.19
SMARCE1-213ENST00000578044 FMO4P31512 558 aa13.85□□□□□ -0.19
SMARCE1-213ENST00000578044 COILP38432 576 aaPredicted RBP13.85□□□□□ -0.19
SMARCE1-213ENST00000578044 DHX34Q14147 1143 aaKnown RBP13.85□□□□□ -0.19
SMARCE1-213ENST00000578044 FAM53BQ14153 422 aa13.85□□□□□ -0.19
SMARCE1-213ENST00000578044 SLC9A5Q14940 896 aa13.85□□□□□ -0.19
SMARCE1-213ENST00000578044 KLHL38Q2WGJ6 581 aa13.85□□□□□ -0.19
SMARCE1-213ENST00000578044 FHL5Q5TD97 284 aa13.85□□□□□ -0.19
SMARCE1-213ENST00000578044 FAM69BQ5VUD6 431 aa13.85□□□□□ -0.19
SMARCE1-213ENST00000578044 B3GNTL1Q67FW5 361 aaPredicted RBP13.85□□□□□ -0.19
SMARCE1-213ENST00000578044 FBXO42Q6P3S6 717 aa13.85□□□□□ -0.19
SMARCE1-213ENST00000578044 KIRREL2Q6UWL6 708 aa13.85□□□□□ -0.19
SMARCE1-213ENST00000578044 GALNT7Q86SF2 657 aa13.85□□□□□ -0.19
SMARCE1-213ENST00000578044 ZADH2Q8N4Q0 377 aa13.85□□□□□ -0.19
SMARCE1-213ENST00000578044 SKA2Q8WVK7 121 aaPredicted RBP13.85□□□□□ -0.19
SMARCE1-213ENST00000578044 SLCO2A1Q92959 643 aa13.85□□□□□ -0.19
SMARCE1-213ENST00000578044 MAGOHBQ96A72 148 aaKnown RBP13.85□□□□□ -0.19
SMARCE1-213ENST00000578044 SERPINB12Q96P63 405 aa13.85□□□□□ -0.19
SMARCE1-213ENST00000578044 EBNA1BP2Q99848 306 aaKnown RBP13.85□□□□□ -0.19
SMARCE1-213ENST00000578044 NAT9Q9BTE0 207 aa13.85□□□□□ -0.19
SMARCE1-213ENST00000578044 ZNF304Q9HCX3 659 aa13.85□□□□□ -0.19
SMARCE1-213ENST00000578044 CRYL1Q9Y2S2 319 aa13.85□□□□□ -0.19
SMARCE1-213ENST00000578044 MED16Q9Y2X0 877 aa13.85□□□□□ -0.19
SMARCE1-213ENST00000578044 DHRS7Q9Y394 339 aa13.85□□□□□ -0.19
SMARCE1-213ENST00000578044 HS3ST3B1Q9Y662 390 aa13.85□□□□□ -0.19
SMARCE1-213ENST00000578044 ITPR2Q14571 2701 aa13.84□□□□□ -0.19
SMARCE1-213ENST00000578044 KCNE1BA0A087WTH5 132 aa13.84□□□□□ -0.19
SMARCE1-213ENST00000578044 WIPF3A6NGB9 483 aa13.84□□□□□ -0.19
SMARCE1-213ENST00000578044 PGRMC1O00264 195 aaKnown RBP13.84□□□□□ -0.19
SMARCE1-213ENST00000578044 TTC4O95801 387 aa13.84□□□□□ -0.19
SMARCE1-213ENST00000578044 CXCR5P32302 372 aa13.84□□□□□ -0.19
SMARCE1-213ENST00000578044 AP2B1P63010 937 aa13.84□□□□□ -0.19
SMARCE1-213ENST00000578044 OCA2Q04671 838 aa13.84□□□□□ -0.19
SMARCE1-213ENST00000578044 THOC5Q13769 683 aaKnown RBP13.84□□□□□ -0.19
SMARCE1-213ENST00000578044 DSG2Q14126 1118 aa13.84□□□□□ -0.19
SMARCE1-213ENST00000578044 LONRF1Q17RB8 773 aa13.84□□□□□ -0.19
SMARCE1-213ENST00000578044 CCSMST1Q4G0I0 132 aa13.84□□□□□ -0.19
SMARCE1-213ENST00000578044 ACSBG2Q5FVE4 666 aa13.84□□□□□ -0.19
SMARCE1-213ENST00000578044 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.84□□□□□ -0.19
SMARCE1-213ENST00000578044 AGAP7PQ5VUJ5 663 aa13.84□□□□□ -0.19
SMARCE1-213ENST00000578044 ATG9BQ674R7 924 aa13.84□□□□□ -0.19
SMARCE1-213ENST00000578044 ZNF470Q6ECI4 717 aa13.84□□□□□ -0.19
SMARCE1-213ENST00000578044 TTC27Q6P3X3 843 aa13.84□□□□□ -0.19
SMARCE1-213ENST00000578044 CNSTQ6PJW8 725 aa13.84□□□□□ -0.19
SMARCE1-213ENST00000578044 CCDC137Q6PK04 289 aaKnown RBP13.84□□□□□ -0.19
SMARCE1-213ENST00000578044 PAQR7Q86WK9 346 aa13.84□□□□□ -0.19
SMARCE1-213ENST00000578044 FAM20CQ8IXL6 584 aa13.84□□□□□ -0.19
SMARCE1-213ENST00000578044 ARHGEF39Q8N4T4 335 aa13.84□□□□□ -0.19
SMARCE1-213ENST00000578044 OTUD6BQ8N6M0 293 aa13.84□□□□□ -0.19
SMARCE1-213ENST00000578044 NAT8LQ8N9F0 302 aa13.84□□□□□ -0.19
SMARCE1-213ENST00000578044 INPP5DQ92835 1189 aa13.84□□□□□ -0.19
SMARCE1-213ENST00000578044 SIGLEC10Q96LC7 697 aa13.84□□□□□ -0.19
SMARCE1-213ENST00000578044 AGAP4Q96P64 663 aa13.84□□□□□ -0.19
SMARCE1-213ENST00000578044 LMF1Q96S06 567 aa13.84□□□□□ -0.19
SMARCE1-213ENST00000578044 MIPEPQ99797 713 aa13.84□□□□□ -0.19
SMARCE1-213ENST00000578044 DPH7Q9BTV6 452 aa13.84□□□□□ -0.19
SMARCE1-213ENST00000578044 PCBD2Q9H0N5 130 aa13.84□□□□□ -0.19
SMARCE1-213ENST00000578044 CCDC68Q9H2F9 335 aa13.84□□□□□ -0.19
SMARCE1-213ENST00000578044 C14orf105Q9NVL8 296 aa13.84□□□□□ -0.19
SMARCE1-213ENST00000578044 ZNF282Q9UDV7 671 aaPredicted RBP13.84□□□□□ -0.19
SMARCE1-213ENST00000578044 FBXL4Q9UKA2 621 aa13.84□□□□□ -0.19
SMARCE1-213ENST00000578044 KLHL20Q9Y2M5 609 aa13.84□□□□□ -0.19
SMARCE1-213ENST00000578044 SCN2AQ99250 2005 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms