RNA–Protein interactions for RNA: ENST00000577706.1

TOP2A-203, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-203ENST00000577706 NLRP14Q86W24 1093 aa3.03□□□□□ -1.92
TOP2A-203ENST00000577706 LINC00346Q8IVM7 164 aa3.03□□□□□ -1.92
TOP2A-203ENST00000577706 NUP93Q8N1F7 819 aa3.03□□□□□ -1.92
TOP2A-203ENST00000577706 OR11H4Q8NGC9 324 aa3.03□□□□□ -1.92
TOP2A-203ENST00000577706 PTPMT1Q8WUK0 201 aaPredicted RBP3.03□□□□□ -1.92
TOP2A-203ENST00000577706 ARHGAP45Q92619 1136 aa3.03□□□□□ -1.92
TOP2A-203ENST00000577706 KRT35Q92764 455 aa3.03□□□□□ -1.92
TOP2A-203ENST00000577706 TSGA13Q96PP4 275 aa3.03□□□□□ -1.92
TOP2A-203ENST00000577706 ABHD1Q96SE0 405 aa3.03□□□□□ -1.92
TOP2A-203ENST00000577706 SHARPINQ9H0F6 387 aa3.03□□□□□ -1.92
TOP2A-203ENST00000577706 MMP27Q9H306 513 aa3.03□□□□□ -1.92
TOP2A-203ENST00000577706 TRPV4Q9HBA0 871 aa3.03□□□□□ -1.92
TOP2A-203ENST00000577706 SERINC1Q9NRX5 453 aa3.03□□□□□ -1.92
TOP2A-203ENST00000577706 FGF21Q9NSA1 209 aa3.03□□□□□ -1.92
TOP2A-203ENST00000577706 ARGLU1Q9NWB6 273 aaPredicted RBP3.03□□□□□ -1.92
TOP2A-203ENST00000577706 DNAJB9Q9UBS3 223 aa3.03□□□□□ -1.92
TOP2A-203ENST00000577706 EPHA6Q9UF33 1036 aa3.03□□□□□ -1.92
TOP2A-203ENST00000577706 COL5A2P05997 1499 aaPredicted RBP3.03□□□□□ -1.93
TOP2A-203ENST00000577706 LOC102723996A0A087X1L8 192 aa3.02□□□□□ -1.93
TOP2A-203ENST00000577706 MEX3AA1L020 520 aaKnown RBP3.02□□□□□ -1.93
TOP2A-203ENST00000577706 TMEM221A6NGB7 291 aa3.02□□□□□ -1.93
TOP2A-203ENST00000577706 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.02□□□□□ -1.93
TOP2A-203ENST00000577706 H0Y626 953 aa3.02□□□□□ -1.93
TOP2A-203ENST00000577706 FMO6PO60774 539 aa3.02□□□□□ -1.93
TOP2A-203ENST00000577706 GUCA1CO95843 209 aa3.02□□□□□ -1.93
TOP2A-203ENST00000577706 OR2T7P0C7T2 308 aa3.02□□□□□ -1.93
TOP2A-203ENST00000577706 HSPA8P11142 646 aaKnown RBP3.02□□□□□ -1.93
TOP2A-203ENST00000577706 PCP11498 1178 aaKnown RBP3.02□□□□□ -1.93
TOP2A-203ENST00000577706 GATA1P15976 413 aaPredicted RBP3.02□□□□□ -1.93
TOP2A-203ENST00000577706 GJA1P17302 382 aa3.02□□□□□ -1.93
TOP2A-203ENST00000577706 JAK1P23458 1154 aa3.02□□□□□ -1.93
TOP2A-203ENST00000577706 LEPRP48357 1165 aaKnown RBP3.02□□□□□ -1.93
TOP2A-203ENST00000577706 GCNT1Q02742 428 aa3.02□□□□□ -1.93
TOP2A-203ENST00000577706 UBXN1Q04323 297 aa3.02□□□□□ -1.93
TOP2A-203ENST00000577706 ZNF415Q09FC8 603 aa3.02□□□□□ -1.93
TOP2A-203ENST00000577706 STK4Q13043 487 aa3.02□□□□□ -1.93
TOP2A-203ENST00000577706 CHAF1BQ13112 559 aa3.02□□□□□ -1.93
TOP2A-203ENST00000577706 PCLAFQ15004 111 aa3.02□□□□□ -1.93
TOP2A-203ENST00000577706 NECTIN1Q15223 517 aa3.02□□□□□ -1.93
TOP2A-203ENST00000577706 HLA-BQ31612 363 aa3.02□□□□□ -1.93
TOP2A-203ENST00000577706 BSPRYQ5W0U4 402 aa3.02□□□□□ -1.93
TOP2A-203ENST00000577706 NAA16Q6N069 864 aaPredicted RBP3.02□□□□□ -1.93
TOP2A-203ENST00000577706 CNSTQ6PJW8 725 aa3.02□□□□□ -1.93
TOP2A-203ENST00000577706 TMEM173Q86WV6 379 aaPredicted RBP3.02□□□□□ -1.93
TOP2A-203ENST00000577706 CDK20Q8IZL9 346 aa3.02□□□□□ -1.93
TOP2A-203ENST00000577706 ZNF619Q8N2I2 560 aa3.02□□□□□ -1.93
TOP2A-203ENST00000577706 TEX9Q8N6V9 391 aa3.02□□□□□ -1.93
TOP2A-203ENST00000577706 IPMKQ8NFU5 416 aa3.02□□□□□ -1.93
TOP2A-203ENST00000577706 ZNF622Q969S3 477 aaKnown RBP eCLIP3.02□□□□□ -1.936e-13■■□□□ 11.5
TOP2A-203ENST00000577706 VPS33AQ96AX1 596 aa3.02□□□□□ -1.93
TOP2A-203ENST00000577706 OMA1Q96E52 524 aa3.02□□□□□ -1.93
TOP2A-203ENST00000577706 URM1Q9BTM9 101 aaKnown RBP3.02□□□□□ -1.93
TOP2A-203ENST00000577706 ANP32EQ9BTT0 268 aa3.02□□□□□ -1.93
TOP2A-203ENST00000577706 ACAT2Q9BWD1 397 aa3.02□□□□□ -1.93
TOP2A-203ENST00000577706 KLHL4Q9C0H6 718 aa3.02□□□□□ -1.93
TOP2A-203ENST00000577706 CPVLQ9H3G5 476 aa3.02□□□□□ -1.93
TOP2A-203ENST00000577706 PANK4Q9NVE7 773 aa3.02□□□□□ -1.93
TOP2A-203ENST00000577706 DCAF16Q9NXF7 216 aa3.02□□□□□ -1.93
TOP2A-203ENST00000577706 P4HTMQ9NXG6 502 aa3.02□□□□□ -1.93
TOP2A-203ENST00000577706 PSD3Q9NYI0 1048 aa3.02□□□□□ -1.93
TOP2A-203ENST00000577706 RABL2AQ9UBK7 228 aaPredicted RBP3.02□□□□□ -1.93
TOP2A-203ENST00000577706 GTF3C4Q9UKN8 822 aa3.02□□□□□ -1.93
TOP2A-203ENST00000577706 WBP11Q9Y2W2 641 aaKnown RBP3.02□□□□□ -1.93
TOP2A-203ENST00000577706 GRIP1Q9Y3R0 1128 aa3.02□□□□□ -1.93
TOP2A-203ENST00000577706 GPR75-ASB3A0A0A6YYF3 556 aa3.01□□□□□ -1.93
TOP2A-203ENST00000577706 ERICH4A6NGS2 130 aa3.01□□□□□ -1.93
TOP2A-203ENST00000577706 CPLX1O14810 134 aa3.01□□□□□ -1.93
TOP2A-203ENST00000577706 PI15O43692 258 aa3.01□□□□□ -1.93
TOP2A-203ENST00000577706 TSPAN1O60635 241 aa3.01□□□□□ -1.93
TOP2A-203ENST00000577706 ENTPD3O75355 529 aa3.01□□□□□ -1.93
TOP2A-203ENST00000577706 PSMD10O75832 226 aa3.01□□□□□ -1.93
TOP2A-203ENST00000577706 TOMM70O94826 608 aa3.01□□□□□ -1.93
TOP2A-203ENST00000577706 NXPH2O95156 264 aa3.01□□□□□ -1.93
TOP2A-203ENST00000577706 C22orf31O95567 290 aa3.01□□□□□ -1.93
TOP2A-203ENST00000577706 HMOX1P09601 288 aa3.01□□□□□ -1.93
TOP2A-203ENST00000577706 THEGLP0DJG4 465 aa3.01□□□□□ -1.93
TOP2A-203ENST00000577706 GATA2P23769 480 aaPredicted RBP3.01□□□□□ -1.93
TOP2A-203ENST00000577706 DNASE1P24855 282 aa3.01□□□□□ -1.93
TOP2A-203ENST00000577706 PTPN3P26045 913 aa3.01□□□□□ -1.93
TOP2A-203ENST00000577706 SHC1P29353 583 aa3.01□□□□□ -1.93
TOP2A-203ENST00000577706 NNMTP40261 264 aa3.01□□□□□ -1.93
TOP2A-203ENST00000577706 OPRL1P41146 370 aa3.01□□□□□ -1.93
TOP2A-203ENST00000577706 EIF2DP41214 584 aaKnown RBP3.01□□□□□ -1.93
TOP2A-203ENST00000577706 RPL21P46778 160 aaKnown RBP3.01□□□□□ -1.93
TOP2A-203ENST00000577706 SLC9A3P48764 834 aa3.01□□□□□ -1.93
TOP2A-203ENST00000577706 CDH13P55290 713 aa3.01□□□□□ -1.93
TOP2A-203ENST00000577706 MAZP56270 477 aaKnown RBP3.01□□□□□ -1.93
TOP2A-203ENST00000577706 TAF10Q12962 218 aa3.01□□□□□ -1.93
TOP2A-203ENST00000577706 CAMK2DQ13557 499 aa3.01□□□□□ -1.93
TOP2A-203ENST00000577706 GRAPQ13588 217 aa3.01□□□□□ -1.93
TOP2A-203ENST00000577706 COG2Q14746 738 aa3.01□□□□□ -1.93
TOP2A-203ENST00000577706 SLMAPQ14BN4 828 aa3.01□□□□□ -1.93
TOP2A-203ENST00000577706 SHROOM1Q2M3G4 852 aaPredicted RBP3.01□□□□□ -1.93
TOP2A-203ENST00000577706 WSCD2Q2TBF2 565 aa3.01□□□□□ -1.93
TOP2A-203ENST00000577706 PARP10Q53GL7 1025 aa3.01□□□□□ -1.93
TOP2A-203ENST00000577706 GPR139Q6DWJ6 353 aa3.01□□□□□ -1.93
TOP2A-203ENST00000577706 TMEM211Q6ICI0 200 aa3.01□□□□□ -1.93
TOP2A-203ENST00000577706 SPINK14Q6IE38 97 aa3.01□□□□□ -1.93
TOP2A-203ENST00000577706 CAVIN1Q6NZI2 390 aaKnown RBP3.01□□□□□ -1.93
TOP2A-203ENST00000577706 SUSD1Q6UWL2 747 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms