RNA–Protein interactions for RNA: ENST00000577246.5

COPS3-214, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 639 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-214ENST00000577246 PRICKLE3O43900 615 aaPredicted RBP12.71□□□□□ -0.37
COPS3-214ENST00000577246 CTSVO60911 334 aa12.71□□□□□ -0.37
COPS3-214ENST00000577246 PHF2O75151 1096 aa12.71□□□□□ -0.37
COPS3-214ENST00000577246 VPS26AO75436 327 aa12.71□□□□□ -0.37
COPS3-214ENST00000577246 F10P00742 488 aa12.71□□□□□ -0.37
COPS3-214ENST00000577246 EIF2S1P05198 315 aaKnown RBP12.71□□□□□ -0.37
COPS3-214ENST00000577246 ANXA5P08758 320 aa12.71□□□□□ -0.37
COPS3-214ENST00000577246 PSMA3P25788 255 aa12.71□□□□□ -0.37
COPS3-214ENST00000577246 FOXN2P32314 431 aa12.71□□□□□ -0.37
COPS3-214ENST00000577246 EEF1A2Q05639 463 aaKnown RBP12.71□□□□□ -0.37
COPS3-214ENST00000577246 ZNF33BQ06732 778 aa12.71□□□□□ -0.37
COPS3-214ENST00000577246 PARP6Q2NL67 630 aa12.71□□□□□ -0.37
COPS3-214ENST00000577246 P3H1Q32P28 736 aa12.71□□□□□ -0.37
COPS3-214ENST00000577246 C11orf63Q6NUN7 778 aa12.71□□□□□ -0.37
COPS3-214ENST00000577246 CAVIN1Q6NZI2 390 aaKnown RBP12.71□□□□□ -0.37
COPS3-214ENST00000577246 AFTPHQ6ULP2 937 aa12.71□□□□□ -0.37
COPS3-214ENST00000577246 RNF44Q7L0R7 432 aa12.71□□□□□ -0.37
COPS3-214ENST00000577246 RAD51AP1Q96B01 352 aa12.71□□□□□ -0.37
COPS3-214ENST00000577246 IL17FQ96PD4 163 aa12.71□□□□□ -0.37
COPS3-214ENST00000577246 ZFYVE21Q9BQ24 234 aa12.71□□□□□ -0.37
COPS3-214ENST00000577246 MESP1Q9BRJ9 268 aa12.71□□□□□ -0.37
COPS3-214ENST00000577246 TUBB6Q9BUF5 446 aa12.71□□□□□ -0.37
COPS3-214ENST00000577246 ZNF700Q9H0M5 742 aa12.71□□□□□ -0.37
COPS3-214ENST00000577246 MCCC2Q9HCC0 563 aa12.71□□□□□ -0.37
COPS3-214ENST00000577246 MKKSQ9NPJ1 570 aaPredicted RBP12.71□□□□□ -0.37
COPS3-214ENST00000577246 STMN3Q9NZ72 180 aa12.71□□□□□ -0.37
COPS3-214ENST00000577246 TINAGQ9UJW2 476 aa12.71□□□□□ -0.37
COPS3-214ENST00000577246 ZGRF1Q86YA3 2104 aa12.7□□□□□ -0.38
COPS3-214ENST00000577246 LOC102723996A0A087X1L8 192 aa12.7□□□□□ -0.38
COPS3-214ENST00000577246 A0A0J9YVX5 310 aa12.7□□□□□ -0.38
COPS3-214ENST00000577246 RCCD1A6NED2 376 aa12.7□□□□□ -0.38
COPS3-214ENST00000577246 MROH6A6NGR9 719 aa12.7□□□□□ -0.38
COPS3-214ENST00000577246 TTI1O43156 1089 aa12.7□□□□□ -0.38
COPS3-214ENST00000577246 PJA2O43164 708 aa12.7□□□□□ -0.38
COPS3-214ENST00000577246 GPC4O75487 556 aa12.7□□□□□ -0.38
COPS3-214ENST00000577246 TPH1P17752 444 aa12.7□□□□□ -0.38
COPS3-214ENST00000577246 CCR7P32248 378 aa12.7□□□□□ -0.38
COPS3-214ENST00000577246 TLE4Q04727 773 aa12.7□□□□□ -0.38
COPS3-214ENST00000577246 C3AR1Q16581 482 aa12.7□□□□□ -0.38
COPS3-214ENST00000577246 ZNF766Q5HY98 468 aa12.7□□□□□ -0.38
COPS3-214ENST00000577246 AARS2Q5JTZ9 985 aaKnown RBP12.7□□□□□ -0.38
COPS3-214ENST00000577246 KCTD11Q693B1 232 aa12.7□□□□□ -0.38
COPS3-214ENST00000577246 FRMPD2BQ6IN97 320 aa12.7□□□□□ -0.38
COPS3-214ENST00000577246 Q6ZPB1 254 aaPredicted RBP12.7□□□□□ -0.38
COPS3-214ENST00000577246 NEK10Q6ZWH5 1172 aa12.7□□□□□ -0.38
COPS3-214ENST00000577246 LINC00523Q86TU6 105 aa12.7□□□□□ -0.38
COPS3-214ENST00000577246 LAPTM4BQ86VI4 370 aa12.7□□□□□ -0.38
COPS3-214ENST00000577246 SPPL2CQ8IUH8 684 aa12.7□□□□□ -0.38
COPS3-214ENST00000577246 OR2L3Q8NG85 312 aa12.7□□□□□ -0.38
COPS3-214ENST00000577246 HMGCLL1Q8TB92 370 aa12.7□□□□□ -0.38
COPS3-214ENST00000577246 MAGEC3Q8TD91 643 aa12.7□□□□□ -0.38
COPS3-214ENST00000577246 METTL21AQ8WXB1 218 aa12.7□□□□□ -0.38
COPS3-214ENST00000577246 GPR137Q96N19 417 aa12.7□□□□□ -0.38
COPS3-214ENST00000577246 CHP1Q99653 195 aa12.7□□□□□ -0.38
COPS3-214ENST00000577246 MIPEPQ99797 713 aa12.7□□□□□ -0.38
COPS3-214ENST00000577246 CARD6Q9BX69 1037 aa12.7□□□□□ -0.38
COPS3-214ENST00000577246 TGIF2Q9GZN2 237 aa12.7□□□□□ -0.38
COPS3-214ENST00000577246 UTP6Q9NYH9 597 aaKnown RBP12.7□□□□□ -0.38
COPS3-214ENST00000577246 ZNF835Q9Y2P0 537 aa12.7□□□□□ -0.38
COPS3-214ENST00000577246 MEMO1Q9Y316 297 aa12.7□□□□□ -0.38
COPS3-214ENST00000577246 MDC1Q14676 2089 aaKnown RBP12.69□□□□□ -0.38
COPS3-214ENST00000577246 HIVEP1P15822 2718 aa12.69□□□□□ -0.38
COPS3-214ENST00000577246 CCDC162PA2VCL2 907 aa12.69□□□□□ -0.38
COPS3-214ENST00000577246 OR51F1A6NGY5 319 aa12.69□□□□□ -0.38
COPS3-214ENST00000577246 KPNA5O15131 536 aa12.69□□□□□ -0.38
COPS3-214ENST00000577246 CBFA2T2O43439 604 aa12.69□□□□□ -0.38
COPS3-214ENST00000577246 OR1I1O60431 355 aa12.69□□□□□ -0.38
COPS3-214ENST00000577246 SLCO2B1O94956 709 aa12.69□□□□□ -0.38
COPS3-214ENST00000577246 TJP3O95049 919 aa12.69□□□□□ -0.38
COPS3-214ENST00000577246 CYC1P08574 325 aa12.69□□□□□ -0.38
COPS3-214ENST00000577246 ITGAMP11215 1152 aa12.69□□□□□ -0.38
COPS3-214ENST00000577246 CMPK1P30085 196 aa12.69□□□□□ -0.38
COPS3-214ENST00000577246 PTPN7P35236 360 aa12.69□□□□□ -0.38
COPS3-214ENST00000577246 CCNFP41002 786 aa12.69□□□□□ -0.38
COPS3-214ENST00000577246 MARCKSL1P49006 195 aa12.69□□□□□ -0.38
COPS3-214ENST00000577246 GRB7Q14451 532 aa12.69□□□□□ -0.38
COPS3-214ENST00000577246 GARNL3Q5VVW2 1013 aa12.69□□□□□ -0.38
COPS3-214ENST00000577246 DTWD1Q8N5C7 304 aa12.69□□□□□ -0.38
COPS3-214ENST00000577246 FAM98AQ8NCA5 519 aaKnown RBP12.69□□□□□ -0.38
COPS3-214ENST00000577246 SKA2Q8WVK7 121 aaPredicted RBP12.69□□□□□ -0.38
COPS3-214ENST00000577246 ZNF354BQ96LW1 612 aa12.69□□□□□ -0.38
COPS3-214ENST00000577246 C10orf90Q96M02 699 aa12.69□□□□□ -0.38
COPS3-214ENST00000577246 FOPNLQ96NB1 174 aa12.69□□□□□ -0.38
COPS3-214ENST00000577246 OSBPL8Q9BZF1 889 aa12.69□□□□□ -0.38
COPS3-214ENST00000577246 CIDEBQ9UHD4 219 aa12.69□□□□□ -0.38
COPS3-214ENST00000577246 ANKRD12Q6UB98 2062 aa12.69□□□□□ -0.38
COPS3-214ENST00000577246 CCDC88CQ9P219 2028 aa12.69□□□□□ -0.38
COPS3-214ENST00000577246 SVILO95425 2214 aa12.69□□□□□ -0.38
COPS3-214ENST00000577246 AKAP9Q99996 3911 aa12.68□□□□□ -0.38
COPS3-214ENST00000577246 ZFHX3Q15911 3703 aa12.68□□□□□ -0.38
COPS3-214ENST00000577246 LOC105369274A0A096LPK9 316 aa12.68□□□□□ -0.38
COPS3-214ENST00000577246 LOC102723532A0A0G2JNH3 316 aa12.68□□□□□ -0.38
COPS3-214ENST00000577246 FAM227AF5H4B4 570 aa12.68□□□□□ -0.38
COPS3-214ENST00000577246 C19orf84I3L1E1 186 aa12.68□□□□□ -0.38
COPS3-214ENST00000577246 TXNDC9O14530 226 aa12.68□□□□□ -0.38
COPS3-214ENST00000577246 MED26O95402 600 aa12.68□□□□□ -0.38
COPS3-214ENST00000577246 C8orf89P0DMQ9 161 aa12.68□□□□□ -0.38
COPS3-214ENST00000577246 ANP32AP39687 249 aaKnown RBP12.68□□□□□ -0.38
COPS3-214ENST00000577246 SLC26A3P40879 764 aa12.68□□□□□ -0.38
COPS3-214ENST00000577246 KIR3DL1P43629 444 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms