RNA–Protein interactions for RNA: ENST00000576862.5

NUP88-213, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-213ENST00000576862 A2MP01023 1474 aa4.63□□□□□ -1.67
NUP88-213ENST00000576862 GLI2P10070 1586 aa4.63□□□□□ -1.67
NUP88-213ENST00000576862 FRMPD1Q5SYB0 1578 aa4.63□□□□□ -1.67
NUP88-213ENST00000576862 NEMP2A6NFY4 417 aa4.63□□□□□ -1.67
NUP88-213ENST00000576862 ANKRD61A6NGH8 418 aa4.63□□□□□ -1.67
NUP88-213ENST00000576862 SLCO1B7G3V0H7 640 aa4.63□□□□□ -1.67
NUP88-213ENST00000576862 DFFBO76075 338 aa4.63□□□□□ -1.67
NUP88-213ENST00000576862 IGHV2-70P01814 119 aa4.63□□□□□ -1.67
NUP88-213ENST00000576862 SERPINB2P05120 415 aa4.63□□□□□ -1.67
NUP88-213ENST00000576862 RNF224P0DH78 156 aa4.63□□□□□ -1.67
NUP88-213ENST00000576862 HAPLN1P10915 354 aaPredicted RBP4.63□□□□□ -1.67
NUP88-213ENST00000576862 DEKP35659 375 aaKnown RBP4.63□□□□□ -1.67
NUP88-213ENST00000576862 RAD52P43351 418 aa4.63□□□□□ -1.67
NUP88-213ENST00000576862 BMXP51813 675 aa4.63□□□□□ -1.67
NUP88-213ENST00000576862 TAF10Q12962 218 aa4.63□□□□□ -1.67
NUP88-213ENST00000576862 TEAD2Q15562 447 aa4.63□□□□□ -1.67
NUP88-213ENST00000576862 UGT3A2Q3SY77 523 aa4.63□□□□□ -1.67
NUP88-213ENST00000576862 SLC25A53Q5H9E4 307 aa4.63□□□□□ -1.67
NUP88-213ENST00000576862 LCE1EQ5T753 118 aa4.63□□□□□ -1.67
NUP88-213ENST00000576862 GPR139Q6DWJ6 353 aa4.63□□□□□ -1.67
NUP88-213ENST00000576862 PSRC1Q6PGN9 363 aaPredicted RBP4.63□□□□□ -1.67
NUP88-213ENST00000576862 Q6ZSR9 355 aa4.63□□□□□ -1.67
NUP88-213ENST00000576862 PLPPR4Q7Z2D5 763 aa4.63□□□□□ -1.67
NUP88-213ENST00000576862 NUP54Q7Z3B4 507 aa4.63□□□□□ -1.67
NUP88-213ENST00000576862 ARHGAP22Q7Z5H3 698 aa4.63□□□□□ -1.67
NUP88-213ENST00000576862 POGLUT1Q8NBL1 392 aa4.63□□□□□ -1.67
NUP88-213ENST00000576862 TMEM178AQ8NBL3 297 aa4.63□□□□□ -1.67
NUP88-213ENST00000576862 LINC00615Q96LM1 132 aaPredicted RBP4.63□□□□□ -1.67
NUP88-213ENST00000576862 SHARPINQ9H0F6 387 aa4.63□□□□□ -1.67
NUP88-213ENST00000576862 ATP13A3Q9H7F0 1226 aa4.63□□□□□ -1.67
NUP88-213ENST00000576862 NOL11Q9H8H0 719 aaKnown RBP4.63□□□□□ -1.67
NUP88-213ENST00000576862 CNOT10Q9H9A5 744 aaKnown RBP4.63□□□□□ -1.67
NUP88-213ENST00000576862 ERVMER34-1Q9H9K5 563 aa4.63□□□□□ -1.67
NUP88-213ENST00000576862 GKN1Q9NS71 199 aa4.63□□□□□ -1.67
NUP88-213ENST00000576862 RNF186Q9NXI6 227 aa4.63□□□□□ -1.67
NUP88-213ENST00000576862 IL17BQ9UHF5 180 aa4.63□□□□□ -1.67
NUP88-213ENST00000576862 TRIM17Q9Y577 477 aa4.63□□□□□ -1.67
NUP88-213ENST00000576862 PTPRTO14522 1441 aa4.63□□□□□ -1.67
NUP88-213ENST00000576862 UHRF1BP1Q6BDS2 1440 aa4.63□□□□□ -1.67
NUP88-213ENST00000576862 SPATA31E1Q6ZUB1 1445 aa4.63□□□□□ -1.67
NUP88-213ENST00000576862 YEATS2Q9ULM3 1422 aa4.63□□□□□ -1.67
NUP88-213ENST00000576862 VWDEQ8N2E2 1590 aa4.62□□□□□ -1.67
NUP88-213ENST00000576862 TRIM77I1YAP6 450 aa4.62□□□□□ -1.67
NUP88-213ENST00000576862 PTGESO14684 152 aa4.62□□□□□ -1.67
NUP88-213ENST00000576862 KLF11O14901 512 aa4.62□□□□□ -1.67
NUP88-213ENST00000576862 RAB40ALP0C0E4 278 aa4.62□□□□□ -1.67
NUP88-213ENST00000576862 MNDAP41218 407 aa4.62□□□□□ -1.67
NUP88-213ENST00000576862 MTHFRP42898 656 aa4.62□□□□□ -1.67
NUP88-213ENST00000576862 CLK1P49759 484 aaKnown RBP4.62□□□□□ -1.67
NUP88-213ENST00000576862 MAPK12P53778 367 aa4.62□□□□□ -1.67
NUP88-213ENST00000576862 MAZP56270 477 aaKnown RBP4.62□□□□□ -1.67
NUP88-213ENST00000576862 ALCAMQ13740 583 aa4.62□□□□□ -1.67
NUP88-213ENST00000576862 PRR27Q6MZM9 219 aa4.62□□□□□ -1.67
NUP88-213ENST00000576862 MARVELD2Q8N4S9 558 aa4.62□□□□□ -1.67
NUP88-213ENST00000576862 DCLK2Q8N568 766 aa4.62□□□□□ -1.67
NUP88-213ENST00000576862 MRGPRDQ8TDS7 321 aa4.62□□□□□ -1.67
NUP88-213ENST00000576862 DYRK2Q92630 601 aa4.62□□□□□ -1.67
NUP88-213ENST00000576862 SYN2Q92777 582 aaPredicted RBP4.62□□□□□ -1.67
NUP88-213ENST00000576862 ZNF653Q96CK0 615 aa4.62□□□□□ -1.67
NUP88-213ENST00000576862 ARSGQ96EG1 525 aa4.62□□□□□ -1.67
NUP88-213ENST00000576862 FAM20AQ96MK3 541 aa4.62□□□□□ -1.67
NUP88-213ENST00000576862 MYCBPQ99417 103 aaPredicted RBP4.62□□□□□ -1.67
NUP88-213ENST00000576862 SEPHS2Q99611 448 aa4.62□□□□□ -1.67
NUP88-213ENST00000576862 CENPOQ9BU64 300 aa4.62□□□□□ -1.67
NUP88-213ENST00000576862 OR2B2Q9GZK3 357 aa4.62□□□□□ -1.67
NUP88-213ENST00000576862 CPVLQ9H3G5 476 aa4.62□□□□□ -1.67
NUP88-213ENST00000576862 ANKEF1Q9NU02 776 aa4.62□□□□□ -1.67
NUP88-213ENST00000576862 PLCXD1Q9NUJ7 323 aa4.62□□□□□ -1.67
NUP88-213ENST00000576862 P4HTMQ9NXG6 502 aa4.62□□□□□ -1.67
NUP88-213ENST00000576862 SYNRGQ9UMZ2 1314 aa4.62□□□□□ -1.67
NUP88-213ENST00000576862 KANK1Q14678 1352 aa4.62□□□□□ -1.67
NUP88-213ENST00000576862 PRDM15P57071 1507 aaPredicted RBP4.62□□□□□ -1.67
NUP88-213ENST00000576862 DIP2BQ9P265 1576 aa4.61□□□□□ -1.67
NUP88-213ENST00000576862 IQGAP3Q86VI3 1631 aa4.61□□□□□ -1.67
NUP88-213ENST00000576862 MROH1Q8NDA8 1641 aa4.61□□□□□ -1.67
NUP88-213ENST00000576862 FAM170AA1A519 330 aa4.61□□□□□ -1.67
NUP88-213ENST00000576862 ENO4A6NNW6 628 aa4.61□□□□□ -1.67
NUP88-213ENST00000576862 FIBPO43427 364 aa4.61□□□□□ -1.67
NUP88-213ENST00000576862 HMMRO75330 724 aa4.61□□□□□ -1.67
NUP88-213ENST00000576862 DDHD2O94830 711 aa4.61□□□□□ -1.67
NUP88-213ENST00000576862 ZNF75DP51815 510 aa4.61□□□□□ -1.67
NUP88-213ENST00000576862 SNRPD1P62314 119 aaKnown RBP4.61□□□□□ -1.67
NUP88-213ENST00000576862 SQLEQ14534 574 aa4.61□□□□□ -1.67
NUP88-213ENST00000576862 HERC3Q15034 1050 aa4.61□□□□□ -1.67
NUP88-213ENST00000576862 TOMM20Q15388 145 aa4.61□□□□□ -1.67
NUP88-213ENST00000576862 ODF4Q2M2E3 257 aa4.61□□□□□ -1.67
NUP88-213ENST00000576862 VWC2Q2TAL6 325 aa4.61□□□□□ -1.67
NUP88-213ENST00000576862 LETM2Q2VYF4 491 aa4.61□□□□□ -1.67
NUP88-213ENST00000576862 ERMARDQ5T6L9 678 aa4.61□□□□□ -1.67
NUP88-213ENST00000576862 C20orf194Q5TEA3 1177 aa4.61□□□□□ -1.67
NUP88-213ENST00000576862 MFSD12Q6NUT3 480 aa4.61□□□□□ -1.67
NUP88-213ENST00000576862 CDK20Q8IZL9 346 aa4.61□□□□□ -1.67
NUP88-213ENST00000576862 KIRREL3Q8IZU9 778 aa4.61□□□□□ -1.67
NUP88-213ENST00000576862 NDUFAF2Q8N183 169 aa4.61□□□□□ -1.67
NUP88-213ENST00000576862 CHCHD4Q8N4Q1 142 aa4.61□□□□□ -1.67
NUP88-213ENST00000576862 THAP8Q8NA92 274 aa4.61□□□□□ -1.67
NUP88-213ENST00000576862 POMGNT2Q8NAT1 580 aa4.61□□□□□ -1.67
NUP88-213ENST00000576862 ATL1Q8WXF7 558 aa4.61□□□□□ -1.67
NUP88-213ENST00000576862 SLF1Q9BQI6 1058 aa4.61□□□□□ -1.67
NUP88-213ENST00000576862 URM1Q9BTM9 101 aaKnown RBP4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms