RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 AGAP7PQ5VUJ5 663 aa15.2■□□□□ 0.02
NUP88-207ENST00000573584 KIAA1614Q5VZ46 1190 aa15.2■□□□□ 0.02
NUP88-207ENST00000573584 PLD3Q8IV08 490 aa15.2■□□□□ 0.02
NUP88-207ENST00000573584 HPS1Q92902 700 aa15.2■□□□□ 0.02
NUP88-207ENST00000573584 APIPQ96GX9 242 aa15.2■□□□□ 0.02
NUP88-207ENST00000573584 APOLD1Q96LR9 279 aa15.2■□□□□ 0.02
NUP88-207ENST00000573584 SLIRPQ9GZT3 109 aaKnown RBP15.2■□□□□ 0.02
NUP88-207ENST00000573584 MANSC4A6NHS7 340 aaPredicted RBP15.2■□□□□ 0.02
NUP88-207ENST00000573584 CLIC1O00299 241 aa15.2■□□□□ 0.02
NUP88-207ENST00000573584 TRBC1P01850 177 aa15.2■□□□□ 0.02
NUP88-207ENST00000573584 CD36P16671 472 aa15.2■□□□□ 0.02
NUP88-207ENST00000573584 ENGP17813 658 aa15.2■□□□□ 0.02
NUP88-207ENST00000573584 KDELR2P33947 212 aa15.2■□□□□ 0.02
NUP88-207ENST00000573584 HNF1BP35680 557 aa15.2■□□□□ 0.02
NUP88-207ENST00000573584 TGFBR1P36897 503 aa15.2■□□□□ 0.02
NUP88-207ENST00000573584 KIR3DL1P43629 444 aa15.2■□□□□ 0.02
NUP88-207ENST00000573584 AP1S1P61966 158 aa15.2■□□□□ 0.02
NUP88-207ENST00000573584 FPGSQ05932 587 aa15.2■□□□□ 0.02
NUP88-207ENST00000573584 VMACQ2NL98 169 aa15.2■□□□□ 0.02
NUP88-207ENST00000573584 TRAF7Q6Q0C0 670 aa15.2■□□□□ 0.02
NUP88-207ENST00000573584 ZNF783Q6ZMS7 281 aa15.2■□□□□ 0.02
NUP88-207ENST00000573584 ANKS3Q6ZW76 656 aa15.2■□□□□ 0.02
NUP88-207ENST00000573584 PRSS48Q7RTY5 328 aa15.2■□□□□ 0.02
NUP88-207ENST00000573584 CMTM7Q96FZ5 175 aa15.2■□□□□ 0.02
NUP88-207ENST00000573584 PANX1Q96RD7 426 aa15.2■□□□□ 0.02
NUP88-207ENST00000573584 BTBD2Q9BX70 525 aa15.2■□□□□ 0.02
NUP88-207ENST00000573584 SACM1LQ9NTJ5 587 aa15.2■□□□□ 0.02
NUP88-207ENST00000573584 RPS6KA6Q9UK32 745 aa15.2■□□□□ 0.02
NUP88-207ENST00000573584 TTC34A8MYJ7 566 aa15.2■□□□□ 0.02
NUP88-207ENST00000573584 KCNK5O95279 499 aa15.2■□□□□ 0.02
NUP88-207ENST00000573584 MAPK1P28482 360 aa15.2■□□□□ 0.02
NUP88-207ENST00000573584 GKP32189 559 aa15.2■□□□□ 0.02
NUP88-207ENST00000573584 KRT20P35900 424 aa15.2■□□□□ 0.02
NUP88-207ENST00000573584 PLEKHG6Q3KR16 790 aa15.2■□□□□ 0.02
NUP88-207ENST00000573584 AHSA2Q719I0 299 aa15.2■□□□□ 0.02
NUP88-207ENST00000573584 TMEM173Q86WV6 379 aaPredicted RBP15.2■□□□□ 0.02
NUP88-207ENST00000573584 FBXO22Q8NEZ5 403 aa15.2■□□□□ 0.02
NUP88-207ENST00000573584 BHMTQ93088 406 aa15.2■□□□□ 0.02
NUP88-207ENST00000573584 ZHX1-C8orf76Q96EF9 292 aa15.2■□□□□ 0.02
NUP88-207ENST00000573584 TTPALQ9BTX7 342 aa15.2■□□□□ 0.02
NUP88-207ENST00000573584 ARHGAP39Q9C0H5 1083 aa15.2■□□□□ 0.02
NUP88-207ENST00000573584 POLE4Q9NR33 117 aa15.2■□□□□ 0.02
NUP88-207ENST00000573584 TRPM5Q9NZQ8 1165 aa15.2■□□□□ 0.02
NUP88-207ENST00000573584 LCKP06239 509 aa15.19■□□□□ 0.02
NUP88-207ENST00000573584 CCND3P30281 292 aaPredicted RBP15.19■□□□□ 0.02
NUP88-207ENST00000573584 RPP38P78345 283 aaKnown RBP15.19■□□□□ 0.02
NUP88-207ENST00000573584 BCL2L1Q07817 233 aa15.19■□□□□ 0.02
NUP88-207ENST00000573584 PROX2Q3B8N5 592 aa15.19■□□□□ 0.02
NUP88-207ENST00000573584 ZNF621Q6ZSS3 439 aa15.19■□□□□ 0.02
NUP88-207ENST00000573584 NEK10Q6ZWH5 1172 aa15.19■□□□□ 0.02
NUP88-207ENST00000573584 SLC22A16Q86VW1 577 aa15.19■□□□□ 0.02
NUP88-207ENST00000573584 IFNL1Q8IU54 200 aa15.19■□□□□ 0.02
NUP88-207ENST00000573584 CCDC71Q8IV32 467 aaPredicted RBP15.19■□□□□ 0.02
NUP88-207ENST00000573584 NXPE1Q8N323 547 aa15.19■□□□□ 0.02
NUP88-207ENST00000573584 NELL1Q92832 810 aa15.19■□□□□ 0.02
NUP88-207ENST00000573584 KCTD5Q9NXV2 234 aa15.19■□□□□ 0.02
NUP88-207ENST00000573584 C2orf78A6NCI8 922 aa15.19■□□□□ 0.02
NUP88-207ENST00000573584 EFCAB9A8MZ26 197 aa15.19■□□□□ 0.02
NUP88-207ENST00000573584 FPGTO14772 594 aa15.19■□□□□ 0.02
NUP88-207ENST00000573584 RPL17P18621 184 aaKnown RBP15.19■□□□□ 0.02
NUP88-207ENST00000573584 CSKP41240 450 aa15.19■□□□□ 0.02
NUP88-207ENST00000573584 FLT3LGP49771 235 aa15.19■□□□□ 0.02
NUP88-207ENST00000573584 DUOXA1Q1HG43 343 aa15.19■□□□□ 0.02
NUP88-207ENST00000573584 ZXDCQ2QGD7 858 aaPredicted RBP15.19■□□□□ 0.02
NUP88-207ENST00000573584 CATSPEREQ5SY80 951 aa15.19■□□□□ 0.02
NUP88-207ENST00000573584 CST9Q5W186 159 aa15.19■□□□□ 0.02
NUP88-207ENST00000573584 DSG4Q86SJ6 1040 aa15.19■□□□□ 0.02
NUP88-207ENST00000573584 RHOXF1Q8NHV9 184 aa15.19■□□□□ 0.02
NUP88-207ENST00000573584 SKA2Q8WVK7 121 aaPredicted RBP15.19■□□□□ 0.02
NUP88-207ENST00000573584 PYCR2Q96C36 320 aa15.19■□□□□ 0.02
NUP88-207ENST00000573584 HSH2DQ96JZ2 352 aa15.19■□□□□ 0.02
NUP88-207ENST00000573584 DACH2Q96NX9 599 aa15.19■□□□□ 0.02
NUP88-207ENST00000573584 REXO4Q9GZR2 422 aaKnown RBP15.19■□□□□ 0.02
NUP88-207ENST00000573584 DSN1Q9H410 356 aa15.19■□□□□ 0.02
NUP88-207ENST00000573584 REEP1Q9H902 201 aa15.19■□□□□ 0.02
NUP88-207ENST00000573584 TMED5Q9Y3A6 229 aa15.19■□□□□ 0.02
NUP88-207ENST00000573584 PLXNA4Q9HCM2 1894 aa15.19■□□□□ 0.02
NUP88-207ENST00000573584 SMAD6O43541 496 aaKnown RBP15.18■□□□□ 0.02
NUP88-207ENST00000573584 PCDHGA12O60330 932 aa15.18■□□□□ 0.02
NUP88-207ENST00000573584 MRPS14O60783 128 aaKnown RBP15.18■□□□□ 0.02
NUP88-207ENST00000573584 TRPC1P48995 793 aa15.18■□□□□ 0.02
NUP88-207ENST00000573584 TUFMP49411 452 aaKnown RBP15.18■□□□□ 0.02
NUP88-207ENST00000573584 CREMQ03060 361 aa15.18■□□□□ 0.02
NUP88-207ENST00000573584 NPRL3Q12980 569 aa15.18■□□□□ 0.02
NUP88-207ENST00000573584 GPR33Q49SQ1 333 aa15.18■□□□□ 0.02
NUP88-207ENST00000573584 ZZZ3Q8IYH5 903 aa15.18■□□□□ 0.02
NUP88-207ENST00000573584 PCSK9Q8NBP7 692 aaKnown RBP15.18■□□□□ 0.02
NUP88-207ENST00000573584 PSMA8Q8TAA3 256 aa15.18■□□□□ 0.02
NUP88-207ENST00000573584 IPCEF1Q8WWN9 437 aaPredicted RBP15.18■□□□□ 0.02
NUP88-207ENST00000573584 OVCA2Q8WZ82 227 aa15.18■□□□□ 0.02
NUP88-207ENST00000573584 DPH2Q9BQC3 489 aaPredicted RBP15.18■□□□□ 0.02
NUP88-207ENST00000573584 EBPLQ9BY08 206 aa15.18■□□□□ 0.02
NUP88-207ENST00000573584 EPS8L2Q9H6S3 715 aa15.18■□□□□ 0.02
NUP88-207ENST00000573584 THUMPD1Q9NXG2 353 aaKnown RBP15.18■□□□□ 0.02
NUP88-207ENST00000573584 FAM32AQ9Y421 112 aaKnown RBP15.18■□□□□ 0.02
NUP88-207ENST00000573584 OR51B4Q9Y5P0 310 aa15.18■□□□□ 0.02
NUP88-207ENST00000573584 GPC6Q9Y625 555 aaPredicted RBP15.18■□□□□ 0.02
NUP88-207ENST00000573584 KCNE1BA0A087WTH5 132 aa15.18■□□□□ 0.02
NUP88-207ENST00000573584 OR2A25A4D2G3 310 aa15.18■□□□□ 0.02
NUP88-207ENST00000573584 HTR3EA5X5Y0 456 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms