RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 LCTP09848 1927 aa9.81□□□□□ -0.84
SMG6-213ENST00000573166 LRRC14BA6NHZ5 514 aa9.81□□□□□ -0.84
SMG6-213ENST00000573166 PCDH7O60245 1069 aa9.81□□□□□ -0.84
SMG6-213ENST00000573166 NUAK1O60285 661 aa9.81□□□□□ -0.84
SMG6-213ENST00000573166 UBTFL6P0CB48 400 aaPredicted RBP9.81□□□□□ -0.84
SMG6-213ENST00000573166 MAGEA3P43357 314 aa9.81□□□□□ -0.84
SMG6-213ENST00000573166 SLC25A3Q00325 362 aa9.81□□□□□ -0.84
SMG6-213ENST00000573166 OCA2Q04671 838 aa9.81□□□□□ -0.84
SMG6-213ENST00000573166 TYSND1Q2T9J0 566 aa9.81□□□□□ -0.84
SMG6-213ENST00000573166 TCHHL1Q5QJ38 904 aaPredicted RBP9.81□□□□□ -0.84
SMG6-213ENST00000573166 TMEM184AQ6ZMB5 413 aa9.81□□□□□ -0.84
SMG6-213ENST00000573166 NUDT13Q86X67 352 aa9.81□□□□□ -0.84
SMG6-213ENST00000573166 CLEC4FQ8N1N0 589 aa9.81□□□□□ -0.84
SMG6-213ENST00000573166 DENND6BQ8NEG7 585 aa9.81□□□□□ -0.84
SMG6-213ENST00000573166 TRPV3Q8NET8 790 aa9.81□□□□□ -0.84
SMG6-213ENST00000573166 RHBDD1Q8TEB9 315 aa9.81□□□□□ -0.84
SMG6-213ENST00000573166 EME1Q96AY2 570 aa9.81□□□□□ -0.84
SMG6-213ENST00000573166 CMTM7Q96FZ5 175 aa9.81□□□□□ -0.84
SMG6-213ENST00000573166 ITCHQ96J02 903 aa9.81□□□□□ -0.84
SMG6-213ENST00000573166 VPS50Q96JG6 964 aa9.81□□□□□ -0.84
SMG6-213ENST00000573166 SLC6A18Q96N87 628 aa9.81□□□□□ -0.84
SMG6-213ENST00000573166 BTBD10Q9BSF8 475 aa9.81□□□□□ -0.84
SMG6-213ENST00000573166 NDC1Q9BTX1 674 aa9.81□□□□□ -0.84
SMG6-213ENST00000573166 SERTAD3Q9UJW9 196 aa9.81□□□□□ -0.84
SMG6-213ENST00000573166 DNMT3AQ9Y6K1 912 aaPredicted RBP9.81□□□□□ -0.84
SMG6-213ENST00000573166 OAS3Q9Y6K5 1087 aaKnown RBP9.81□□□□□ -0.84
SMG6-213ENST00000573166 NT5EP21589 574 aa9.81□□□□□ -0.84
SMG6-213ENST00000573166 ME2P23368 584 aa9.81□□□□□ -0.84
SMG6-213ENST00000573166 PTX3P26022 381 aaPredicted RBP9.81□□□□□ -0.84
SMG6-213ENST00000573166 PDHA2P29803 388 aa9.81□□□□□ -0.84
SMG6-213ENST00000573166 RCN1Q15293 331 aa9.81□□□□□ -0.84
SMG6-213ENST00000573166 GK5Q6ZS86 529 aa9.81□□□□□ -0.84
SMG6-213ENST00000573166 OXR1Q8N573 874 aa9.81□□□□□ -0.84
SMG6-213ENST00000573166 C1orf52Q8N6N3 182 aaKnown RBP9.81□□□□□ -0.84
SMG6-213ENST00000573166 FUBP1Q96AE4 644 aaKnown RBP9.81□□□□□ -0.84
SMG6-213ENST00000573166 RGMAQ96B86 450 aa9.81□□□□□ -0.84
SMG6-213ENST00000573166 ALG14Q96F25 216 aa9.81□□□□□ -0.84
SMG6-213ENST00000573166 KCNA7Q96RP8 456 aa9.81□□□□□ -0.84
SMG6-213ENST00000573166 TRIB3Q96RU7 358 aa9.81□□□□□ -0.84
SMG6-213ENST00000573166 C3orf14Q9HBI5 128 aa9.81□□□□□ -0.84
SMG6-213ENST00000573166 PACSIN3Q9UKS6 424 aa9.81□□□□□ -0.84
SMG6-213ENST00000573166 CDC14AQ9UNH5 594 aa9.81□□□□□ -0.84
SMG6-213ENST00000573166 UTRNP46939 3433 aa9.81□□□□□ -0.84
SMG6-213ENST00000573166 A0A1B0GTW7 788 aa9.8□□□□□ -0.84
SMG6-213ENST00000573166 CCDC189A1A4V9 331 aa9.8□□□□□ -0.84
SMG6-213ENST00000573166 ZSCAN9O15535 394 aaPredicted RBP9.8□□□□□ -0.84
SMG6-213ENST00000573166 NRP2O60462 931 aa9.8□□□□□ -0.84
SMG6-213ENST00000573166 CTSLP07711 333 aa9.8□□□□□ -0.84
SMG6-213ENST00000573166 CD27P26842 260 aa9.8□□□□□ -0.84
SMG6-213ENST00000573166 CCR10P46092 362 aa9.8□□□□□ -0.84
SMG6-213ENST00000573166 PRLHRP49683 370 aa9.8□□□□□ -0.84
SMG6-213ENST00000573166 POLR2JP52435 117 aaKnown RBP9.8□□□□□ -0.84
SMG6-213ENST00000573166 DCDC1P59894 354 aa9.8□□□□□ -0.84
SMG6-213ENST00000573166 RACK1P63244 317 aaKnown RBP9.8□□□□□ -0.84
SMG6-213ENST00000573166 SLC13A2Q13183 592 aa9.8□□□□□ -0.84
SMG6-213ENST00000573166 GSTA3Q16772 222 aa9.8□□□□□ -0.84
SMG6-213ENST00000573166 TMEM154Q6P9G4 183 aa9.8□□□□□ -0.84
SMG6-213ENST00000573166 FRMD7Q6ZUT3 714 aa9.8□□□□□ -0.84
SMG6-213ENST00000573166 SYT13Q7L8C5 426 aa9.8□□□□□ -0.84
SMG6-213ENST00000573166 CNTN4Q8IWV2 1026 aa9.8□□□□□ -0.84
SMG6-213ENST00000573166 OR13H1Q8NG92 308 aa9.8□□□□□ -0.84
SMG6-213ENST00000573166 OR2L2Q8NH16 312 aa9.8□□□□□ -0.84
SMG6-213ENST00000573166 MOCOSQ96EN8 888 aa9.8□□□□□ -0.84
SMG6-213ENST00000573166 CAMK1GQ96NX5 476 aa9.8□□□□□ -0.84
SMG6-213ENST00000573166 SEPHS2Q99611 448 aa9.8□□□□□ -0.84
SMG6-213ENST00000573166 SLC12A9Q9BXP2 914 aa9.8□□□□□ -0.84
SMG6-213ENST00000573166 SLC29A3Q9BZD2 475 aa9.8□□□□□ -0.84
SMG6-213ENST00000573166 TMEM168Q9H0V1 697 aa9.8□□□□□ -0.84
SMG6-213ENST00000573166 ZNF556Q9HAH1 456 aa9.8□□□□□ -0.84
SMG6-213ENST00000573166 VPS4AQ9UN37 437 aa9.8□□□□□ -0.84
SMG6-213ENST00000573166 DUSP12Q9UNI6 340 aa9.8□□□□□ -0.84
SMG6-213ENST00000573166 CNOT1A5YKK6 2376 aaKnown RBP9.8□□□□□ -0.84
SMG6-213ENST00000573166 A0A1B0GVT2 93 aa9.8□□□□□ -0.84
SMG6-213ENST00000573166 EME2A4GXA9 379 aaPredicted RBP9.8□□□□□ -0.84
SMG6-213ENST00000573166 KRT75O95678 551 aa9.8□□□□□ -0.84
SMG6-213ENST00000573166 NUDT14O95848 222 aa9.8□□□□□ -0.84
SMG6-213ENST00000573166 PEX11BO96011 259 aa9.8□□□□□ -0.84
SMG6-213ENST00000573166 GSNP06396 782 aa9.8□□□□□ -0.84
SMG6-213ENST00000573166 ZCCHC18P0CG32 403 aa9.8□□□□□ -0.84
SMG6-213ENST00000573166 EFNA1P20827 205 aaPredicted RBP9.8□□□□□ -0.84
SMG6-213ENST00000573166 EEF1B2P24534 225 aaKnown RBP9.8□□□□□ -0.84
SMG6-213ENST00000573166 IDH3AP50213 366 aa9.8□□□□□ -0.84
SMG6-213ENST00000573166 TRIP10Q15642 601 aa9.8□□□□□ -0.84
SMG6-213ENST00000573166 TRIM61Q5EBN2 209 aa9.8□□□□□ -0.84
SMG6-213ENST00000573166 CYP2R1Q6VVX0 501 aa9.8□□□□□ -0.84
SMG6-213ENST00000573166 C16orf62Q7Z3J2 963 aa9.8□□□□□ -0.84
SMG6-213ENST00000573166 FAM217AQ8IXS0 508 aa9.8□□□□□ -0.84
SMG6-213ENST00000573166 PLA2G15Q8NCC3 412 aa9.8□□□□□ -0.84
SMG6-213ENST00000573166 PTCD3Q96EY7 689 aaKnown RBP9.8□□□□□ -0.84
SMG6-213ENST00000573166 EBF4Q9BQW3 602 aa9.8□□□□□ -0.84
SMG6-213ENST00000573166 ARMC7Q9H6L4 198 aa9.8□□□□□ -0.84
SMG6-213ENST00000573166 EQTNQ9NQ60 294 aa9.8□□□□□ -0.84
SMG6-213ENST00000573166 ZNF646O15015 1829 aaPredicted RBP9.8□□□□□ -0.84
SMG6-213ENST00000573166 POM121BA6NF01 834 aa9.8□□□□□ -0.84
SMG6-213ENST00000573166 H0Y8X5 98 aa9.8□□□□□ -0.84
SMG6-213ENST00000573166 H7C0S8 307 aa9.8□□□□□ -0.84
SMG6-213ENST00000573166 JMJD7P0C870 316 aa9.8□□□□□ -0.84
SMG6-213ENST00000573166 C1GALT1C1LP0DN25 315 aa9.8□□□□□ -0.84
SMG6-213ENST00000573166 NR2F1P10589 423 aa9.8□□□□□ -0.84
SMG6-213ENST00000573166 GABRG2P18507 467 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms