RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 RPE65Q16518 533 aa5.33□□□□□ -1.56
SF3B3-214ENST00000572365 SOWAHAQ2M3V2 549 aa5.33□□□□□ -1.56
SF3B3-214ENST00000572365 EIF2S3LQ2VIR3 472 aaKnown RBP5.33□□□□□ -1.56
SF3B3-214ENST00000572365 HECTD3Q5T447 861 aa5.33□□□□□ -1.56
SF3B3-214ENST00000572365 SFMBT2Q5VUG0 894 aa5.33□□□□□ -1.56
SF3B3-214ENST00000572365 FBXO42Q6P3S6 717 aa5.33□□□□□ -1.56
SF3B3-214ENST00000572365 SLC39A4Q6P5W5 647 aa5.33□□□□□ -1.56
SF3B3-214ENST00000572365 SYT2Q8N9I0 419 aaPredicted RBP5.33□□□□□ -1.56
SF3B3-214ENST00000572365 ANKRD52Q8NB46 1076 aa5.33□□□□□ -1.56
SF3B3-214ENST00000572365 SLC16A11Q8NCK7 471 aa5.33□□□□□ -1.56
SF3B3-214ENST00000572365 OR2T3Q8NH03 318 aa5.33□□□□□ -1.56
SF3B3-214ENST00000572365 HSPH1Q92598 858 aa5.33□□□□□ -1.56
SF3B3-214ENST00000572365 JAKMIP2Q96AA8 810 aa5.33□□□□□ -1.56
SF3B3-214ENST00000572365 PCED1BQ96HM7 432 aa5.33□□□□□ -1.56
SF3B3-214ENST00000572365 APOLD1Q96LR9 279 aa5.33□□□□□ -1.56
SF3B3-214ENST00000572365 SYT15Q9BQS2 421 aa5.33□□□□□ -1.56
SF3B3-214ENST00000572365 KRTAP9-3Q9BYQ3 159 aa5.33□□□□□ -1.56
SF3B3-214ENST00000572365 DPEP3Q9H4B8 488 aa5.33□□□□□ -1.56
SF3B3-214ENST00000572365 MOV10Q9HCE1 1003 aaKnown RBP5.33□□□□□ -1.56
SF3B3-214ENST00000572365 PRSS16Q9NQE7 514 aa5.33□□□□□ -1.56
SF3B3-214ENST00000572365 ELOVL2Q9NXB9 296 aa5.33□□□□□ -1.56
SF3B3-214ENST00000572365 FBXL12Q9NXK8 326 aa5.33□□□□□ -1.56
SF3B3-214ENST00000572365 TAS2R10Q9NYW0 307 aa5.33□□□□□ -1.56
SF3B3-214ENST00000572365 WDR35Q9P2L0 1181 aa5.33□□□□□ -1.56
SF3B3-214ENST00000572365 ZNHIT2Q9UHR6 403 aa5.33□□□□□ -1.56
SF3B3-214ENST00000572365 IPO11Q9UI26 975 aaKnown RBP5.33□□□□□ -1.56
SF3B3-214ENST00000572365 SARDHQ9UL12 918 aa5.33□□□□□ -1.56
SF3B3-214ENST00000572365 CAMK2AQ9UQM7 478 aa5.33□□□□□ -1.56
SF3B3-214ENST00000572365 CCDC168Q8NDH2 2452 aa5.33□□□□□ -1.56
SF3B3-214ENST00000572365 LY6G6EA0A0G2JKS1 128 aa5.32□□□□□ -1.56
SF3B3-214ENST00000572365 A0A1W2PQM1 296 aa5.32□□□□□ -1.56
SF3B3-214ENST00000572365 GOLGA8IPA6NC78 632 aa5.32□□□□□ -1.56
SF3B3-214ENST00000572365 CXorf65A6NEN9 183 aa5.32□□□□□ -1.56
SF3B3-214ENST00000572365 C2CD4BA6NLJ0 364 aa5.32□□□□□ -1.56
SF3B3-214ENST00000572365 GOLGA8JA6NMD2 632 aa5.32□□□□□ -1.56
SF3B3-214ENST00000572365 MID1O15344 667 aa5.32□□□□□ -1.56
SF3B3-214ENST00000572365 MSI1O43347 362 aaKnown RBP5.32□□□□□ -1.56
SF3B3-214ENST00000572365 RNASEH2AO75792 299 aaKnown RBP5.32□□□□□ -1.56
SF3B3-214ENST00000572365 DDAH2O95865 285 aa5.32□□□□□ -1.56
SF3B3-214ENST00000572365 IGLV3-19P01714 112 aa5.32□□□□□ -1.56
SF3B3-214ENST00000572365 KLKB1P03952 638 aa5.32□□□□□ -1.56
SF3B3-214ENST00000572365 DNTTP04053 509 aa5.32□□□□□ -1.56
SF3B3-214ENST00000572365 PRKCGP05129 697 aa5.32□□□□□ -1.56
SF3B3-214ENST00000572365 CD63P08962 238 aa5.32□□□□□ -1.56
SF3B3-214ENST00000572365 UBL4AP11441 157 aa5.32□□□□□ -1.56
SF3B3-214ENST00000572365 COX7A2P14406 83 aa5.32□□□□□ -1.56
SF3B3-214ENST00000572365 DGKAP23743 735 aa5.32□□□□□ -1.56
SF3B3-214ENST00000572365 SKIV2L2P42285 1042 aaKnown RBP5.32□□□□□ -1.56
SF3B3-214ENST00000572365 PTPN9P43378 593 aa5.32□□□□□ -1.56
SF3B3-214ENST00000572365 METAP1P53582 386 aa5.32□□□□□ -1.56
SF3B3-214ENST00000572365 UFM1P61960 85 aa5.32□□□□□ -1.56
SF3B3-214ENST00000572365 TUBB4BP68371 445 aa5.32□□□□□ -1.56
SF3B3-214ENST00000572365 SARNPP82979 210 aaKnown RBP5.32□□□□□ -1.56
SF3B3-214ENST00000572365 ERV3-1Q14264 604 aa5.32□□□□□ -1.56
SF3B3-214ENST00000572365 GALNT3Q14435 633 aa5.32□□□□□ -1.56
SF3B3-214ENST00000572365 KRT32Q14532 448 aa5.32□□□□□ -1.56
SF3B3-214ENST00000572365 ZNF667Q5HYK9 610 aa5.32□□□□□ -1.56
SF3B3-214ENST00000572365 MANEAQ5SRI9 462 aa5.32□□□□□ -1.56
SF3B3-214ENST00000572365 FHL5Q5TD97 284 aa5.32□□□□□ -1.56
SF3B3-214ENST00000572365 HAUS3Q68CZ6 603 aa5.32□□□□□ -1.56
SF3B3-214ENST00000572365 GUSBP11Q6P575 273 aa5.32□□□□□ -1.56
SF3B3-214ENST00000572365 FAM171BQ6P995 826 aa5.32□□□□□ -1.56
SF3B3-214ENST00000572365 BLOC1S2Q6QNY1 142 aa5.32□□□□□ -1.56
SF3B3-214ENST00000572365 LRIG3Q6UXM1 1119 aa5.32□□□□□ -1.56
SF3B3-214ENST00000572365 ZNF782Q6ZMW2 699 aaPredicted RBP5.32□□□□□ -1.56
SF3B3-214ENST00000572365 ZNF788Q6ZQV5 615 aa5.32□□□□□ -1.56
SF3B3-214ENST00000572365 C1orf186Q6ZWK4 172 aa5.32□□□□□ -1.56
SF3B3-214ENST00000572365 EFL1Q7Z2Z2 1120 aaKnown RBP5.32□□□□□ -1.56
SF3B3-214ENST00000572365 EGFL6Q8IUX8 553 aa5.32□□□□□ -1.56
SF3B3-214ENST00000572365 ZC3H3Q8IXZ2 948 aaKnown RBP5.32□□□□□ -1.56
SF3B3-214ENST00000572365 DIS3L2Q8IYB7 885 aaKnown RBP5.32□□□□□ -1.56
SF3B3-214ENST00000572365 CPXM2Q8N436 756 aa5.32□□□□□ -1.56
SF3B3-214ENST00000572365 ARL14Q8N4G2 192 aa5.32□□□□□ -1.56
SF3B3-214ENST00000572365 TMEM217Q8N7C4 229 aa5.32□□□□□ -1.56
SF3B3-214ENST00000572365 PLD5Q8N7P1 536 aa5.32□□□□□ -1.56
SF3B3-214ENST00000572365 SSC4DQ8WTU2 575 aa5.32□□□□□ -1.56
SF3B3-214ENST00000572365 KAT2AQ92830 837 aa5.32□□□□□ -1.56
SF3B3-214ENST00000572365 MIB2Q96AX9 1013 aa5.32□□□□□ -1.56
SF3B3-214ENST00000572365 PPP1R13BQ96KQ4 1090 aa5.32□□□□□ -1.56
SF3B3-214ENST00000572365 SPATA17Q96L03 361 aa5.32□□□□□ -1.56
SF3B3-214ENST00000572365 SLITRK1Q96PX8 696 aa5.32□□□□□ -1.56
SF3B3-214ENST00000572365 SEMA3CQ99985 751 aa5.32□□□□□ -1.56
SF3B3-214ENST00000572365 TREX2Q9BQ50 279 aaPredicted RBP5.32□□□□□ -1.56
SF3B3-214ENST00000572365 MRPL45Q9BRJ2 306 aaKnown RBP5.32□□□□□ -1.56
SF3B3-214ENST00000572365 PIMREGQ9BSJ6 248 aa5.32□□□□□ -1.56
SF3B3-214ENST00000572365 FUCA2Q9BTY2 467 aa5.32□□□□□ -1.56
SF3B3-214ENST00000572365 TSPY26PQ9H489 355 aa5.32□□□□□ -1.56
SF3B3-214ENST00000572365 OSER1Q9NX31 292 aa5.32□□□□□ -1.56
SF3B3-214ENST00000572365 GRHL1Q9NZI5 618 aa5.32□□□□□ -1.56
SF3B3-214ENST00000572365 MPP6Q9NZW5 540 aa5.32□□□□□ -1.56
SF3B3-214ENST00000572365 CPSF3Q9UKF6 684 aaKnown RBP5.32□□□□□ -1.56
SF3B3-214ENST00000572365 ICKQ9UPZ9 632 aa5.32□□□□□ -1.56
SF3B3-214ENST00000572365 DHDHQ9UQ10 334 aa5.32□□□□□ -1.56
SF3B3-214ENST00000572365 SCINQ9Y6U3 715 aa5.32□□□□□ -1.56
SF3B3-214ENST00000572365 U3KQA8 63 aa5.32□□□□□ -1.56
SF3B3-214ENST00000572365 DNHD1Q96M86 4753 aa5.31□□□□□ -1.56
SF3B3-214ENST00000572365 ARHGAP10A1A4S6 786 aa5.31□□□□□ -1.56
SF3B3-214ENST00000572365 WIPF3A6NGB9 483 aa5.31□□□□□ -1.56
SF3B3-214ENST00000572365 PES1O00541 588 aaKnown RBP5.31□□□□□ -1.56
SF3B3-214ENST00000572365 CEP104O60308 925 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms