RNA–Protein interactions for RNA: ENST00000571212.1

KARSP3-201, Transcript of lysyl-tRNA synthetase pseudogene 3, humanhuman

BASIC

Gene KARSP3, Length 1,504 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARSP3-201ENST00000571212 ILKQ13418 452 aa4.79□□□□□ -1.64
KARSP3-201ENST00000571212 SHBQ15464 509 aa4.79□□□□□ -1.64
KARSP3-201ENST00000571212 BOLA3Q53S33 107 aa4.79□□□□□ -1.64
KARSP3-201ENST00000571212 AWAT1Q58HT5 328 aa4.79□□□□□ -1.64
KARSP3-201ENST00000571212 MS4A13Q5J8X5 152 aa4.79□□□□□ -1.64
KARSP3-201ENST00000571212 TXNRD3NBQ6F5E7 133 aa4.79□□□□□ -1.64
KARSP3-201ENST00000571212 ZDHHC24Q6UX98 284 aa4.79□□□□□ -1.64
KARSP3-201ENST00000571212 NT5DC3Q86UY8 548 aa4.79□□□□□ -1.64
KARSP3-201ENST00000571212 NLRP14Q86W24 1093 aa4.79□□□□□ -1.64
KARSP3-201ENST00000571212 GATAD2AQ86YP4 633 aa4.79□□□□□ -1.64
KARSP3-201ENST00000571212 MFN1Q8IWA4 741 aa4.79□□□□□ -1.64
KARSP3-201ENST00000571212 ZNF843Q8N446 348 aa4.79□□□□□ -1.64
KARSP3-201ENST00000571212 ZNF557Q8N988 423 aaPredicted RBP4.79□□□□□ -1.64
KARSP3-201ENST00000571212 SAP25Q8TEE9 199 aa4.79□□□□□ -1.64
KARSP3-201ENST00000571212 RNF139Q8WU17 664 aa4.79□□□□□ -1.64
KARSP3-201ENST00000571212 FAM172AQ8WUF8 416 aa4.79□□□□□ -1.64
KARSP3-201ENST00000571212 LRTOMTQ8WZ04 291 aa4.79□□□□□ -1.64
KARSP3-201ENST00000571212 N4BP2L2Q92802 583 aaPredicted RBP4.79□□□□□ -1.64
KARSP3-201ENST00000571212 TTC17Q96AE7 1141 aa4.79□□□□□ -1.64
KARSP3-201ENST00000571212 HES6Q96HZ4 224 aa4.79□□□□□ -1.64
KARSP3-201ENST00000571212 BTN2A3PQ96KV6 586 aa4.79□□□□□ -1.64
KARSP3-201ENST00000571212 DESI2Q9BSY9 194 aa4.79□□□□□ -1.64
KARSP3-201ENST00000571212 TSGA10Q9BZW7 698 aa4.79□□□□□ -1.64
KARSP3-201ENST00000571212 RSPH9Q9H1X1 276 aaPredicted RBP4.79□□□□□ -1.64
KARSP3-201ENST00000571212 PABPC3Q9H361 631 aaKnown RBP4.79□□□□□ -1.64
KARSP3-201ENST00000571212 SYNCQ9H7C4 482 aa4.79□□□□□ -1.64
KARSP3-201ENST00000571212 SMURF2Q9HAU4 748 aa4.79□□□□□ -1.64
KARSP3-201ENST00000571212 BATF3Q9NR55 127 aa4.79□□□□□ -1.64
KARSP3-201ENST00000571212 ABCB8Q9NUT2 735 aa4.79□□□□□ -1.64
KARSP3-201ENST00000571212 DDIT4Q9NX09 232 aa4.79□□□□□ -1.64
KARSP3-201ENST00000571212 RCOR3Q9P2K3 495 aaPredicted RBP4.79□□□□□ -1.64
KARSP3-201ENST00000571212 XPO7Q9UIA9 1087 aaKnown RBP4.79□□□□□ -1.64
KARSP3-201ENST00000571212 ANAPC7Q9UJX3 599 aa4.79□□□□□ -1.64
KARSP3-201ENST00000571212 GGA2Q9UJY4 613 aa4.79□□□□□ -1.64
KARSP3-201ENST00000571212 TMEM98Q9Y2Y6 226 aa4.79□□□□□ -1.64
KARSP3-201ENST00000571212 RAI2Q9Y5P3 530 aa4.79□□□□□ -1.64
KARSP3-201ENST00000571212 CFAP46Q8IYW2 2715 aa4.79□□□□□ -1.64
KARSP3-201ENST00000571212 A0A1W2PR77 199 aa4.78□□□□□ -1.64
KARSP3-201ENST00000571212 TARSL2A2RTX5 802 aaKnown RBP4.78□□□□□ -1.64
KARSP3-201ENST00000571212 EME2A4GXA9 379 aaPredicted RBP4.78□□□□□ -1.64
KARSP3-201ENST00000571212 LRRC72A6NJI9 287 aa4.78□□□□□ -1.64
KARSP3-201ENST00000571212 GOLGA8SH3BPF8 625 aa4.78□□□□□ -1.64
KARSP3-201ENST00000571212 FCHO1O14526 889 aa4.78□□□□□ -1.64
KARSP3-201ENST00000571212 CHUKO15111 745 aa4.78□□□□□ -1.64
KARSP3-201ENST00000571212 MSI1O43347 362 aaKnown RBP4.78□□□□□ -1.64
KARSP3-201ENST00000571212 KRT86O43790 486 aa4.78□□□□□ -1.64
KARSP3-201ENST00000571212 AHCYL1O43865 530 aa4.78□□□□□ -1.64
KARSP3-201ENST00000571212 RNASEH1O60930 286 aaKnown RBP4.78□□□□□ -1.64
KARSP3-201ENST00000571212 E2F6O75461 281 aa4.78□□□□□ -1.64
KARSP3-201ENST00000571212 TPPPO94811 219 aa4.78□□□□□ -1.64
KARSP3-201ENST00000571212 WNT1P04628 370 aa4.78□□□□□ -1.64
KARSP3-201ENST00000571212 CTNNA2P26232 953 aa4.78□□□□□ -1.64
KARSP3-201ENST00000571212 PEX2P28328 305 aa4.78□□□□□ -1.64
KARSP3-201ENST00000571212 EPHA8P29322 1005 aaPredicted RBP4.78□□□□□ -1.64
KARSP3-201ENST00000571212 SLC7A1P30825 629 aa4.78□□□□□ -1.64
KARSP3-201ENST00000571212 STIP1P31948 543 aaKnown RBP4.78□□□□□ -1.64
KARSP3-201ENST00000571212 CTNNA1P35221 906 aaKnown RBP4.78□□□□□ -1.64
KARSP3-201ENST00000571212 NR4A2P43354 598 aa4.78□□□□□ -1.64
KARSP3-201ENST00000571212 RXRGP48443 463 aa4.78□□□□□ -1.64
KARSP3-201ENST00000571212 ARRB1P49407 418 aaPredicted RBP4.78□□□□□ -1.64
KARSP3-201ENST00000571212 SULT1E1P49888 294 aa4.78□□□□□ -1.64
KARSP3-201ENST00000571212 CCR5P51681 352 aa4.78□□□□□ -1.64
KARSP3-201ENST00000571212 TAS2R40P59535 323 aa4.78□□□□□ -1.64
KARSP3-201ENST00000571212 ST8SIA6P61647 398 aa4.78□□□□□ -1.64
KARSP3-201ENST00000571212 SLC13A2Q13183 592 aa4.78□□□□□ -1.64
KARSP3-201ENST00000571212 DNAJC3Q13217 504 aa4.78□□□□□ -1.64
KARSP3-201ENST00000571212 HNRNPA1L2Q32P51 320 aaKnown RBP4.78□□□□□ -1.64
KARSP3-201ENST00000571212 SLC45A4Q5BKX6 768 aa4.78□□□□□ -1.64
KARSP3-201ENST00000571212 ERMARDQ5T6L9 678 aa4.78□□□□□ -1.64
KARSP3-201ENST00000571212 HES3Q5TGS1 186 aa4.78□□□□□ -1.64
KARSP3-201ENST00000571212 DCUN1D2Q6PH85 259 aa4.78□□□□□ -1.64
KARSP3-201ENST00000571212 ZNF783Q6ZMS7 281 aa4.78□□□□□ -1.64
KARSP3-201ENST00000571212 CCDC80Q76M96 950 aa4.78□□□□□ -1.64
KARSP3-201ENST00000571212 PHLDB2Q86SQ0 1253 aa4.78□□□□□ -1.64
KARSP3-201ENST00000571212 EID2Q8N6I1 236 aa4.78□□□□□ -1.64
KARSP3-201ENST00000571212 CCDC185Q8N715 623 aa4.78□□□□□ -1.64
KARSP3-201ENST00000571212 KDM1BQ8NB78 822 aa4.78□□□□□ -1.64
KARSP3-201ENST00000571212 OR2T34Q8NGX1 318 aa4.78□□□□□ -1.64
KARSP3-201ENST00000571212 GANCQ8TET4 914 aa4.78□□□□□ -1.64
KARSP3-201ENST00000571212 FGF11Q92914 225 aa4.78□□□□□ -1.64
KARSP3-201ENST00000571212 ALG14Q96F25 216 aa4.78□□□□□ -1.64
KARSP3-201ENST00000571212 WBP1Q96G27 269 aa4.78□□□□□ -1.64
KARSP3-201ENST00000571212 PRICKLE1Q96MT3 831 aaPredicted RBP4.78□□□□□ -1.64
KARSP3-201ENST00000571212 SARGQ9BW04 601 aa4.78□□□□□ -1.64
KARSP3-201ENST00000571212 FUT8Q9BYC5 575 aa4.78□□□□□ -1.64
KARSP3-201ENST00000571212 TKTL2Q9H0I9 626 aa4.78□□□□□ -1.64
KARSP3-201ENST00000571212 ERVMER34-1Q9H9K5 563 aa4.78□□□□□ -1.64
KARSP3-201ENST00000571212 GDF3Q9NR23 364 aa4.78□□□□□ -1.64
KARSP3-201ENST00000571212 SEPT11Q9NVA2 429 aaKnown RBP4.78□□□□□ -1.64
KARSP3-201ENST00000571212 FBXL12Q9NXK8 326 aa4.78□□□□□ -1.64
KARSP3-201ENST00000571212 TUBA8Q9NY65 449 aaPredicted RBP4.78□□□□□ -1.64
KARSP3-201ENST00000571212 SPATA7Q9P0W8 599 aa4.78□□□□□ -1.64
KARSP3-201ENST00000571212 MYO1AQ9UBC5 1043 aa4.78□□□□□ -1.64
KARSP3-201ENST00000571212 TRIM10Q9UDY6 481 aa4.78□□□□□ -1.64
KARSP3-201ENST00000571212 FZD4Q9ULV1 537 aa4.78□□□□□ -1.64
KARSP3-201ENST00000571212 OR51B4Q9Y5P0 310 aa4.78□□□□□ -1.64
KARSP3-201ENST00000571212 MAST4O15021 2626 aa4.78□□□□□ -1.64
KARSP3-201ENST00000571212 SPTA1P02549 2419 aa4.78□□□□□ -1.64
KARSP3-201ENST00000571212 MYO18BQ8IUG5 2567 aa4.78□□□□□ -1.64
KARSP3-201ENST00000571212 GOLGA6L9A6NEM1 432 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms