RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 TAZQ16635 292 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 SLC36A3Q495N2 470 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 TIGD5Q53EQ6 642 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 MPPE1Q53F39 396 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 NOMO2Q5JPE7 1267 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 CLLU1OSQ5K130 101 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 ZBTB37Q5TC79 503 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 ZNF468Q5VIY5 522 aaPredicted RBP3.47□□□□□ -1.85
SMG6-208ENST00000570874 LRRC38Q5VT99 294 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 LIPMQ5VYY2 423 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 ZDHHC20Q5W0Z9 365 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 CARD17Q5XLA6 110 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 WSCD1Q658N2 575 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 CWF19L1Q69YN2 538 aaKnown RBP3.47□□□□□ -1.85
SMG6-208ENST00000570874 HMBOX1Q6NT76 420 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 DNAJC24Q6P3W2 148 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 TTC27Q6P3X3 843 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 LRRC31Q6UY01 552 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 RIPOR1Q6ZS17 1223 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 COLCA1Q6ZS62 124 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 PAQR9Q6ZVX9 377 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 FRA10AC1Q70Z53 315 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 VASH1Q7L8A9 365 aaPredicted RBP3.47□□□□□ -1.85
SMG6-208ENST00000570874 BHLHA15Q7RTS1 189 aaPredicted RBP3.47□□□□□ -1.85
SMG6-208ENST00000570874 DCXRQ7Z4W1 244 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 CAMKMTQ7Z624 323 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 CCDC25Q86WR0 208 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 ERICH1Q86X53 443 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 MAP7D3Q8IWC1 876 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 PPIL6Q8IXY8 311 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 UNC5BQ8IZJ1 945 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 OFCC1Q8IZS5 231 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 FAM185AQ8N0U4 392 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 GPR137CQ8N3F9 429 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 MINDY1Q8N5J2 469 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 IL17RCQ8NAC3 791 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 STKLD1Q8NE28 680 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 ADCY4Q8NFM4 1077 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 BEST2Q8NFU1 509 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 OR13H1Q8NG92 308 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 OR14C36Q8NHC7 312 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 FEZF2Q8TBJ5 459 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 DNAJB14Q8TBM8 379 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 ACTRT1Q8TDG2 376 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 STK35Q8TDR2 534 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 C1orf54Q8WWF1 131 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 CKAP2Q8WWK9 683 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 ATG4AQ8WYN0 398 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 CFHR4Q92496 578 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 KAT2AQ92830 837 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 APBB2Q92870 758 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 PERPQ96FX8 193 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 PGAM5Q96HS1 289 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 FBXL20Q96IG2 436 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 HSH2DQ96JZ2 352 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 PBKQ96KB5 322 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 HEXIM2Q96MH2 286 aaKnown RBP3.47□□□□□ -1.85
SMG6-208ENST00000570874 ZSWIM3Q96MP5 696 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 SPATA13Q96N96 652 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 PEBP4Q96S96 227 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 TMEM209Q96SK2 561 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 ADAM2Q99965 735 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 C1QTNF3Q9BXJ4 246 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 ADGRE3Q9BY15 652 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 GPR87Q9BY21 358 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 UBE2OQ9C0C9 1292 aaKnown RBP3.47□□□□□ -1.85
SMG6-208ENST00000570874 C6orf62Q9GZU0 229 aaPredicted RBP3.47□□□□□ -1.85
SMG6-208ENST00000570874 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP3.47□□□□□ -1.85
SMG6-208ENST00000570874 MTIF3Q9H2K0 278 aaKnown RBP3.47□□□□□ -1.85
SMG6-208ENST00000570874 SLC32A1Q9H598 525 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 ATP13A3Q9H7F0 1226 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 C10orf88Q9H8K7 445 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 TRIM45Q9H8W5 580 aaPredicted RBP3.47□□□□□ -1.85
SMG6-208ENST00000570874 ACTR5Q9H9F9 607 aaPredicted RBP3.47□□□□□ -1.85
SMG6-208ENST00000570874 AKIRIN1Q9H9L7 192 aaPredicted RBP3.47□□□□□ -1.85
SMG6-208ENST00000570874 NEK6Q9HC98 313 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 LRRC4CQ9HCJ2 640 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 GPN1Q9HCN4 374 aaPredicted RBP3.47□□□□□ -1.85
SMG6-208ENST00000570874 CHRAC1Q9NRG0 131 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 GPR27Q9NS67 375 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 CHST7Q9NS84 486 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 MAN2C1Q9NTJ4 1040 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 CATSPERZQ9NTU4 200 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 TMEM30AQ9NV96 361 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 DNAJC17Q9NVM6 304 aaKnown RBP3.47□□□□□ -1.85
SMG6-208ENST00000570874 GPATCH2LQ9NWQ4 482 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 UVRAGQ9P2Y5 699 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 ZNF212Q9UDV6 495 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 CIDEBQ9UHD4 219 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 GMEB2Q9UKD1 530 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 ADAM30Q9UKF2 790 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 RNF112Q9ULX5 631 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 USP18Q9UMW8 372 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 UBQLN1Q9UMX0 589 aaKnown RBP3.47□□□□□ -1.85
SMG6-208ENST00000570874 PLCL2Q9UPR0 1127 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 SHOC2Q9UQ13 582 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 RUVBL2Q9Y230 463 aaKnown RBP3.47□□□□□ -1.85
SMG6-208ENST00000570874 STARD13Q9Y3M8 1113 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 ZNF451Q9Y4E5 1061 aa3.47□□□□□ -1.85
SMG6-208ENST00000570874 LIPGQ9Y5X9 500 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms