RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 SUZ12Q15022 739 aaKnown RBP14.88□□□□□ -0.03
HERPUD1-219ENST00000570273 INAVAQ3KP66 663 aa14.88□□□□□ -0.03
HERPUD1-219ENST00000570273 XKR6Q5GH73 641 aa14.88□□□□□ -0.03
HERPUD1-219ENST00000570273 ICE2Q659A1 982 aa14.88□□□□□ -0.03
HERPUD1-219ENST00000570273 ARMC6Q6NXE6 501 aa14.88□□□□□ -0.03
HERPUD1-219ENST00000570273 LETMD1Q6P1Q0 360 aa14.88□□□□□ -0.03
HERPUD1-219ENST00000570273 CDYL2Q8N8U2 506 aa14.88□□□□□ -0.03
HERPUD1-219ENST00000570273 PIWIL2Q8TC59 973 aaKnown RBP14.88□□□□□ -0.03
HERPUD1-219ENST00000570273 NEIL2Q969S2 332 aa14.88□□□□□ -0.03
HERPUD1-219ENST00000570273 GRAMD1AQ96CP6 724 aa14.88□□□□□ -0.03
HERPUD1-219ENST00000570273 THOC1Q96FV9 657 aaKnown RBP14.88□□□□□ -0.03
HERPUD1-219ENST00000570273 KCNA7Q96RP8 456 aa14.88□□□□□ -0.03
HERPUD1-219ENST00000570273 NTMT1Q9BV86 223 aa14.88□□□□□ -0.03
HERPUD1-219ENST00000570273 NPHS2Q9NP85 383 aa14.88□□□□□ -0.03
HERPUD1-219ENST00000570273 ACTR10Q9NZ32 417 aa14.88□□□□□ -0.03
HERPUD1-219ENST00000570273 LRIT1Q9P2V4 623 aa14.88□□□□□ -0.03
HERPUD1-219ENST00000570273 TRPS1Q9UHF7 1281 aa14.88□□□□□ -0.03
HERPUD1-219ENST00000570273 ZNF225Q9UK10 706 aa14.88□□□□□ -0.03
HERPUD1-219ENST00000570273 PADI4Q9UM07 663 aa14.88□□□□□ -0.03
HERPUD1-219ENST00000570273 OR5K3A6NET4 321 aa14.87□□□□□ -0.03
HERPUD1-219ENST00000570273 NUDT21O43809 227 aaKnown RBP14.87□□□□□ -0.03
HERPUD1-219ENST00000570273 UBXN7O94888 489 aa14.87□□□□□ -0.03
HERPUD1-219ENST00000570273 CLDN9O95484 217 aa14.87□□□□□ -0.03
HERPUD1-219ENST00000570273 LMNAP02545 664 aaKnown RBP14.87□□□□□ -0.03
HERPUD1-219ENST00000570273 ENO1P06733 434 aaKnown RBP14.87□□□□□ -0.03
HERPUD1-219ENST00000570273 PROS1P07225 676 aa14.87□□□□□ -0.03
HERPUD1-219ENST00000570273 EBLN1P0CF75 366 aa14.87□□□□□ -0.03
HERPUD1-219ENST00000570273 TYRP1P17643 537 aa14.87□□□□□ -0.03
HERPUD1-219ENST00000570273 AMD1P17707 334 aa14.87□□□□□ -0.03
HERPUD1-219ENST00000570273 HMOX2P30519 316 aa14.87□□□□□ -0.03
HERPUD1-219ENST00000570273 SF3A3Q12874 501 aaKnown RBP eCLIP14.87□□□□□ -0.031e-8■■□□□ 12.2
HERPUD1-219ENST00000570273 FAM219BQ5XKK7 198 aa14.87□□□□□ -0.03
HERPUD1-219ENST00000570273 CLEC6AQ6EIG7 209 aa14.87□□□□□ -0.03
HERPUD1-219ENST00000570273 CGB2Q6NT52 195 aa14.87□□□□□ -0.03
HERPUD1-219ENST00000570273 KLHL35Q6PF15 583 aa14.87□□□□□ -0.03
HERPUD1-219ENST00000570273 RSC1A1Q92681 617 aa14.87□□□□□ -0.03
HERPUD1-219ENST00000570273 SLC22A18Q96BI1 424 aa14.87□□□□□ -0.03
HERPUD1-219ENST00000570273 FAR2Q96K12 515 aa14.87□□□□□ -0.03
HERPUD1-219ENST00000570273 APOLD1Q96LR9 279 aa14.87□□□□□ -0.03
HERPUD1-219ENST00000570273 MAGEB10Q96LZ2 347 aaPredicted RBP14.87□□□□□ -0.03
HERPUD1-219ENST00000570273 EDEM2Q9BV94 578 aa14.87□□□□□ -0.03
HERPUD1-219ENST00000570273 TRIM55Q9BYV6 548 aa14.87□□□□□ -0.03
HERPUD1-219ENST00000570273 DNAAF2Q9NVR5 837 aaKnown RBP14.87□□□□□ -0.03
HERPUD1-219ENST00000570273 HRASLS2Q9NWW9 162 aa14.87□□□□□ -0.03
HERPUD1-219ENST00000570273 KCNK4Q9NYG8 393 aa14.87□□□□□ -0.03
HERPUD1-219ENST00000570273 RNF11Q9Y3C5 154 aa14.87□□□□□ -0.03
HERPUD1-219ENST00000570273 TRAF6Q9Y4K3 522 aa14.87□□□□□ -0.03
HERPUD1-219ENST00000570273 PCDHGB2Q9Y5G2 931 aa14.87□□□□□ -0.03
HERPUD1-219ENST00000570273 OTOGLQ3ZCN5 2332 aa14.86□□□□□ -0.03
HERPUD1-219ENST00000570273 C2orf74A8MZ97 194 aa14.86□□□□□ -0.03
HERPUD1-219ENST00000570273 HGSO14964 777 aaPredicted RBP14.86□□□□□ -0.03
HERPUD1-219ENST00000570273 PRICKLE3O43900 615 aaPredicted RBP14.86□□□□□ -0.03
HERPUD1-219ENST00000570273 UGDHO60701 494 aa14.86□□□□□ -0.03
HERPUD1-219ENST00000570273 PRAMEF4O60810 478 aa14.86□□□□□ -0.03
HERPUD1-219ENST00000570273 TGDSO95455 350 aa14.86□□□□□ -0.03
HERPUD1-219ENST00000570273 CAPN1P07384 714 aa14.86□□□□□ -0.03
HERPUD1-219ENST00000570273 UROSP10746 265 aa14.86□□□□□ -0.03
HERPUD1-219ENST00000570273 HGFP14210 728 aa14.86□□□□□ -0.03
HERPUD1-219ENST00000570273 GLB1P16278 677 aa14.86□□□□□ -0.03
HERPUD1-219ENST00000570273 UGT2B7P16662 529 aa14.86□□□□□ -0.03
HERPUD1-219ENST00000570273 VARSP26640 1264 aaKnown RBP14.86□□□□□ -0.03
HERPUD1-219ENST00000570273 CMPK1P30085 196 aa14.86□□□□□ -0.03
HERPUD1-219ENST00000570273 CAPZBP47756 277 aa14.86□□□□□ -0.03
HERPUD1-219ENST00000570273 EPHA4P54764 986 aa14.86□□□□□ -0.03
HERPUD1-219ENST00000570273 FOXA1P55317 472 aa14.86□□□□□ -0.03
HERPUD1-219ENST00000570273 ABATP80404 500 aa14.86□□□□□ -0.03
HERPUD1-219ENST00000570273 DOC2AQ14183 400 aa14.86□□□□□ -0.03
HERPUD1-219ENST00000570273 SF1Q15637 639 aaKnown RBP14.86□□□□□ -0.03
HERPUD1-219ENST00000570273 PDCD2Q16342 344 aaPredicted RBP14.86□□□□□ -0.03
HERPUD1-219ENST00000570273 GGTA1PQ4G0N0 100 aa14.86□□□□□ -0.03
HERPUD1-219ENST00000570273 CATSPEREQ5SY80 951 aa14.86□□□□□ -0.03
HERPUD1-219ENST00000570273 PRAMEF9Q5VWM5 478 aa14.86□□□□□ -0.03
HERPUD1-219ENST00000570273 KANK2Q63ZY3 851 aa14.86□□□□□ -0.03
HERPUD1-219ENST00000570273 ATG9BQ674R7 924 aa14.86□□□□□ -0.03
HERPUD1-219ENST00000570273 NXPE4Q6UWF7 544 aa14.86□□□□□ -0.03
HERPUD1-219ENST00000570273 SLCO4C1Q6ZQN7 724 aa14.86□□□□□ -0.03
HERPUD1-219ENST00000570273 EFL1Q7Z2Z2 1120 aaKnown RBP14.86□□□□□ -0.03
HERPUD1-219ENST00000570273 ZNF438Q7Z4V0 828 aa14.86□□□□□ -0.03
HERPUD1-219ENST00000570273 TRIM73Q86UV7 250 aa14.86□□□□□ -0.03
HERPUD1-219ENST00000570273 WDR75Q8IWA0 830 aaKnown RBP14.86□□□□□ -0.03
HERPUD1-219ENST00000570273 CLYBLQ8N0X4 340 aa14.86□□□□□ -0.03
HERPUD1-219ENST00000570273 FAM181AQ8N9Y4 354 aa14.86□□□□□ -0.03
HERPUD1-219ENST00000570273 L3MBTL4Q8NA19 623 aa14.86□□□□□ -0.03
HERPUD1-219ENST00000570273 OR2A1Q8NGT9 310 aa14.86□□□□□ -0.03
HERPUD1-219ENST00000570273 METTL6Q8TCB7 284 aa14.86□□□□□ -0.03
HERPUD1-219ENST00000570273 CCDC74AQ96AQ1 378 aa14.86□□□□□ -0.03
HERPUD1-219ENST00000570273 PTCD3Q96EY7 689 aaKnown RBP14.86□□□□□ -0.03
HERPUD1-219ENST00000570273 CCT8L2Q96SF2 557 aa14.86□□□□□ -0.03
HERPUD1-219ENST00000570273 ELAC2Q9BQ52 826 aaKnown RBP14.86□□□□□ -0.03
HERPUD1-219ENST00000570273 SLC29A3Q9BZD2 475 aa14.86□□□□□ -0.03
HERPUD1-219ENST00000570273 ZMYND15Q9H091 742 aa14.86□□□□□ -0.03
HERPUD1-219ENST00000570273 PELI2Q9HAT8 420 aa14.86□□□□□ -0.03
HERPUD1-219ENST00000570273 MRPS30Q9NP92 439 aaKnown RBP14.86□□□□□ -0.03
HERPUD1-219ENST00000570273 SEMA4GQ9NTN9 838 aa14.86□□□□□ -0.03
HERPUD1-219ENST00000570273 CUEDC1Q9NWM3 386 aaPredicted RBP14.86□□□□□ -0.03
HERPUD1-219ENST00000570273 PSD3Q9NYI0 1048 aa14.86□□□□□ -0.03
HERPUD1-219ENST00000570273 TIMM22Q9Y584 194 aa14.86□□□□□ -0.03
HERPUD1-219ENST00000570273 ENTPD2Q9Y5L3 495 aa14.86□□□□□ -0.03
HERPUD1-219ENST00000570273 USH1CQ9Y6N9 552 aa14.86□□□□□ -0.03
HERPUD1-219ENST00000570273 ZNF292O60281 2723 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms