RNA–Protein interactions for RNA: ENST00000569794.1

CHD9-220, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-220ENST00000569794 POLR3CQ9BUI4 534 aaPredicted RBP4.52□□□□□ -1.69
CHD9-220ENST00000569794 ABHD6Q9BV23 337 aa4.52□□□□□ -1.69
CHD9-220ENST00000569794 GCOM2Q9BZD3 368 aaPredicted RBP4.52□□□□□ -1.69
CHD9-220ENST00000569794 YY1AP1Q9H869 796 aa4.52□□□□□ -1.69
CHD9-220ENST00000569794 GPN1Q9HCN4 374 aaPredicted RBP4.52□□□□□ -1.69
CHD9-220ENST00000569794 PPANQ9NQ55 473 aaKnown RBP4.52□□□□□ -1.69
CHD9-220ENST00000569794 TMOD3Q9NYL9 352 aa4.52□□□□□ -1.69
CHD9-220ENST00000569794 POLLQ9UGP5 575 aa4.52□□□□□ -1.69
CHD9-220ENST00000569794 TCF19Q9Y242 345 aa4.52□□□□□ -1.69
CHD9-220ENST00000569794 WBP11Q9Y2W2 641 aaKnown RBP4.52□□□□□ -1.69
CHD9-220ENST00000569794 TTC21BQ7Z4L5 1316 aa4.51□□□□□ -1.69
CHD9-220ENST00000569794 TRBV2A0A0J9YWF9 115 aa4.51□□□□□ -1.69
CHD9-220ENST00000569794 LINC00854A0A1B0GVQ3 168 aa4.51□□□□□ -1.69
CHD9-220ENST00000569794 HNRNPCL2B2RXH8 293 aa4.51□□□□□ -1.69
CHD9-220ENST00000569794 PLK4O00444 970 aa4.51□□□□□ -1.69
CHD9-220ENST00000569794 SOCS6O14544 535 aa4.51□□□□□ -1.69
CHD9-220ENST00000569794 NME6O75414 186 aaPredicted RBP4.51□□□□□ -1.69
CHD9-220ENST00000569794 BBOX1O75936 387 aa4.51□□□□□ -1.69
CHD9-220ENST00000569794 MT-CYBP00156 380 aaPredicted RBP4.51□□□□□ -1.69
CHD9-220ENST00000569794 HIST1H2ABP04908 130 aa4.51□□□□□ -1.69
CHD9-220ENST00000569794 PCCBP05166 539 aa4.51□□□□□ -1.69
CHD9-220ENST00000569794 LINGO3P0C6S8 592 aa4.51□□□□□ -1.69
CHD9-220ENST00000569794 C8orf89P0DMQ9 161 aa4.51□□□□□ -1.69
CHD9-220ENST00000569794 HIST1H2ADP20671 130 aa4.51□□□□□ -1.69
CHD9-220ENST00000569794 GLRA2P23416 452 aa4.51□□□□□ -1.69
CHD9-220ENST00000569794 EEF1B2P24534 225 aaKnown RBP4.51□□□□□ -1.69
CHD9-220ENST00000569794 CCND3P30281 292 aaPredicted RBP4.51□□□□□ -1.69
CHD9-220ENST00000569794 CDKN1AP38936 164 aa4.51□□□□□ -1.69
CHD9-220ENST00000569794 SERPINH1P50454 418 aaKnown RBP4.51□□□□□ -1.69
CHD9-220ENST00000569794 MTTPP55157 894 aa4.51□□□□□ -1.69
CHD9-220ENST00000569794 IL24Q13007 206 aa4.51□□□□□ -1.69
CHD9-220ENST00000569794 GPM6BQ13491 265 aa4.51□□□□□ -1.69
CHD9-220ENST00000569794 ACCSLQ4AC99 568 aa4.51□□□□□ -1.69
CHD9-220ENST00000569794 CDONQ4KMG0 1287 aa4.51□□□□□ -1.69
CHD9-220ENST00000569794 HERC4Q5GLZ8 1057 aaPredicted RBP4.51□□□□□ -1.69
CHD9-220ENST00000569794 CYP4A22Q5TCH4 519 aa4.51□□□□□ -1.69
CHD9-220ENST00000569794 FAM69BQ5VUD6 431 aa4.51□□□□□ -1.69
CHD9-220ENST00000569794 AADACL2Q6P093 401 aa4.51□□□□□ -1.69
CHD9-220ENST00000569794 TEX38Q6PEX7 206 aa4.51□□□□□ -1.69
CHD9-220ENST00000569794 BRAT1Q6PJG6 821 aa4.51□□□□□ -1.69
CHD9-220ENST00000569794 LCTLQ6UWM7 567 aa4.51□□□□□ -1.69
CHD9-220ENST00000569794 WDR88Q6ZMY6 472 aa4.51□□□□□ -1.69
CHD9-220ENST00000569794 C1orf186Q6ZWK4 172 aa4.51□□□□□ -1.69
CHD9-220ENST00000569794 HIST3H2AQ7L7L0 130 aa4.51□□□□□ -1.69
CHD9-220ENST00000569794 LDB1Q86U70 411 aaPredicted RBP4.51□□□□□ -1.69
CHD9-220ENST00000569794 KRTAP7-1Q8IUC3 87 aa4.51□□□□□ -1.69
CHD9-220ENST00000569794 ZCCHC9Q8N567 271 aaKnown RBP4.51□□□□□ -1.69
CHD9-220ENST00000569794 ZNF441Q8N8Z8 693 aa4.51□□□□□ -1.69
CHD9-220ENST00000569794 OR14L1PQ8NHC6 308 aa4.51□□□□□ -1.69
CHD9-220ENST00000569794 C9orf43Q8TAL5 461 aaPredicted RBP4.51□□□□□ -1.69
CHD9-220ENST00000569794 RNASE8Q8TDE3 154 aaKnown RBP4.51□□□□□ -1.69
CHD9-220ENST00000569794 TTC25Q96NG3 672 aa4.51□□□□□ -1.69
CHD9-220ENST00000569794 SEPT5Q99719 369 aaPredicted RBP4.51□□□□□ -1.69
CHD9-220ENST00000569794 GTPBP2Q9BX10 602 aaKnown RBP4.51□□□□□ -1.69
CHD9-220ENST00000569794 NACAP1Q9BZK3 213 aa4.51□□□□□ -1.69
CHD9-220ENST00000569794 PLEKHA4Q9H4M7 779 aa4.51□□□□□ -1.69
CHD9-220ENST00000569794 GORASP2Q9H8Y8 452 aa4.51□□□□□ -1.69
CHD9-220ENST00000569794 BPIFA1Q9NP55 256 aa4.51□□□□□ -1.69
CHD9-220ENST00000569794 SERINC1Q9NRX5 453 aa4.51□□□□□ -1.69
CHD9-220ENST00000569794 ZNHIT6Q9NWK9 470 aaKnown RBP4.51□□□□□ -1.69
CHD9-220ENST00000569794 TAS2R14Q9NYV8 317 aa4.51□□□□□ -1.69
CHD9-220ENST00000569794 CARD8Q9Y2G2 431 aa4.51□□□□□ -1.69
CHD9-220ENST00000569794 NAALAD2Q9Y3Q0 740 aa4.51□□□□□ -1.69
CHD9-220ENST00000569794 U3KQV3 271 aa4.51□□□□□ -1.69
CHD9-220ENST00000569794 NSD2O96028 1365 aa4.51□□□□□ -1.69
CHD9-220ENST00000569794 C2orf92A0A1B0GVN3 265 aa4.5□□□□□ -1.69
CHD9-220ENST00000569794 C1orf226A1L170 272 aa4.5□□□□□ -1.69
CHD9-220ENST00000569794 TARSL2A2RTX5 802 aaKnown RBP4.5□□□□□ -1.69
CHD9-220ENST00000569794 C5orf52A6NGY3 159 aa4.5□□□□□ -1.69
CHD9-220ENST00000569794 SDR42E2A6NKP2 422 aa4.5□□□□□ -1.69
CHD9-220ENST00000569794 FAM72CH0Y354 149 aa4.5□□□□□ -1.69
CHD9-220ENST00000569794 SMAD9O15198 467 aaKnown RBP4.5□□□□□ -1.69
CHD9-220ENST00000569794 CTAGE5O15320 804 aa4.5□□□□□ -1.69
CHD9-220ENST00000569794 KIF1CO43896 1103 aaKnown RBP4.5□□□□□ -1.69
CHD9-220ENST00000569794 SSX5O60225 188 aa4.5□□□□□ -1.69
CHD9-220ENST00000569794 SELENOFO60613 162 aa4.5□□□□□ -1.69
CHD9-220ENST00000569794 OR6B1O95007 311 aa4.5□□□□□ -1.69
CHD9-220ENST00000569794 NR2F2P24468 414 aa4.5□□□□□ -1.69
CHD9-220ENST00000569794 FRKP42685 505 aaPredicted RBP4.5□□□□□ -1.69
CHD9-220ENST00000569794 GPR143P51810 404 aa4.5□□□□□ -1.69
CHD9-220ENST00000569794 ZNF75DP51815 510 aa4.5□□□□□ -1.69
CHD9-220ENST00000569794 TAS2R40P59535 323 aa4.5□□□□□ -1.69
CHD9-220ENST00000569794 PTENP60484 403 aa4.5□□□□□ -1.69
CHD9-220ENST00000569794 HSPB3Q12988 150 aa4.5□□□□□ -1.69
CHD9-220ENST00000569794 ZBTB17Q13105 803 aa4.5□□□□□ -1.69
CHD9-220ENST00000569794 TSTA3Q13630 321 aaPredicted RBP4.5□□□□□ -1.69
CHD9-220ENST00000569794 ZMYND11Q15326 602 aa4.5□□□□□ -1.69
CHD9-220ENST00000569794 ME3Q16798 604 aa4.5□□□□□ -1.69
CHD9-220ENST00000569794 MCMDC2Q4G0Z9 681 aa4.5□□□□□ -1.69
CHD9-220ENST00000569794 FAM72AQ5TYM5 149 aa4.5□□□□□ -1.69
CHD9-220ENST00000569794 TPGS2Q68CL5 300 aa4.5□□□□□ -1.69
CHD9-220ENST00000569794 FAM72DQ6L9T8 149 aa4.5□□□□□ -1.69
CHD9-220ENST00000569794 PIGWQ7Z7B1 504 aa4.5□□□□□ -1.69
CHD9-220ENST00000569794 SYVN1Q86TM6 617 aa4.5□□□□□ -1.69
CHD9-220ENST00000569794 ADIPOR2Q86V24 386 aa4.5□□□□□ -1.69
CHD9-220ENST00000569794 AMZ2Q86W34 360 aa4.5□□□□□ -1.69
CHD9-220ENST00000569794 FAM72BQ86X60 149 aa4.5□□□□□ -1.69
CHD9-220ENST00000569794 HACE1Q8IYU2 909 aa4.5□□□□□ -1.69
CHD9-220ENST00000569794 AADATQ8N5Z0 425 aa4.5□□□□□ -1.69
CHD9-220ENST00000569794 KBTBD3Q8NAB2 608 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms