RNA–Protein interactions for RNA: ENST00000569715.5

PDXDC1-216, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PDXDC1, Length 3,775 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-216ENST00000569715 UGDHO60701 494 aa10.56□□□□□ -0.72
PDXDC1-216ENST00000569715 SH3BGRLO75368 114 aa10.56□□□□□ -0.72
PDXDC1-216ENST00000569715 SEC22BO75396 215 aa10.56□□□□□ -0.72
PDXDC1-216ENST00000569715 RPN2P04844 631 aa10.56□□□□□ -0.72
PDXDC1-216ENST00000569715 TBL3Q12788 808 aaKnown RBP10.56□□□□□ -0.72
PDXDC1-216ENST00000569715 RPE65Q16518 533 aa10.56□□□□□ -0.72
PDXDC1-216ENST00000569715 PRAMEF14Q5SWL7 426 aa10.56□□□□□ -0.72
PDXDC1-216ENST00000569715 PRAMEF13Q5VWM6 474 aa10.56□□□□□ -0.72
PDXDC1-216ENST00000569715 CYP20A1Q6UW02 462 aa10.56□□□□□ -0.72
PDXDC1-216ENST00000569715 SLC6A18Q96N87 628 aa10.56□□□□□ -0.72
PDXDC1-216ENST00000569715 CAMK1GQ96NX5 476 aa10.56□□□□□ -0.72
PDXDC1-216ENST00000569715 CHRDQ9H2X0 955 aa10.56□□□□□ -0.72
PDXDC1-216ENST00000569715 SLC52A3Q9NQ40 469 aa10.56□□□□□ -0.72
PDXDC1-216ENST00000569715 TAC3Q9UHF0 121 aa10.56□□□□□ -0.72
PDXDC1-216ENST00000569715 SLC7A8Q9UHI5 535 aa10.56□□□□□ -0.72
PDXDC1-216ENST00000569715 KLF15Q9UIH9 416 aa10.56□□□□□ -0.72
PDXDC1-216ENST00000569715 ANKRD28O15084 1053 aa10.56□□□□□ -0.72
PDXDC1-216ENST00000569715 OXTRP30559 389 aa10.56□□□□□ -0.72
PDXDC1-216ENST00000569715 SLBPQ14493 270 aaKnown RBP eCLIP10.56□□□□□ -0.72
PDXDC1-216ENST00000569715 SCUBE1Q8IWY4 988 aa10.56□□□□□ -0.72
PDXDC1-216ENST00000569715 ZNF740Q8NDX6 193 aa10.56□□□□□ -0.72
PDXDC1-216ENST00000569715 PROKR1Q8TCW9 393 aa10.56□□□□□ -0.72
PDXDC1-216ENST00000569715 VPS33AQ96AX1 596 aa10.56□□□□□ -0.72
PDXDC1-216ENST00000569715 SLC25A23Q9BV35 468 aa10.56□□□□□ -0.72
PDXDC1-216ENST00000569715 CD320Q9NPF0 282 aa10.56□□□□□ -0.72
PDXDC1-216ENST00000569715 DLGAP4Q9Y2H0 992 aa10.56□□□□□ -0.72
PDXDC1-216ENST00000569715 DYRK1BQ9Y463 629 aa10.56□□□□□ -0.72
PDXDC1-216ENST00000569715 CEP192Q8TEP8 1941 aa10.56□□□□□ -0.72
PDXDC1-216ENST00000569715 A0A1W2PPV9 198 aa10.56□□□□□ -0.72
PDXDC1-216ENST00000569715 ASPDHA6ND91 283 aa10.56□□□□□ -0.72
PDXDC1-216ENST00000569715 ETHE1O95571 254 aa10.56□□□□□ -0.72
PDXDC1-216ENST00000569715 CDH1P12830 882 aa10.56□□□□□ -0.72
PDXDC1-216ENST00000569715 ACTR1BP42025 376 aa10.56□□□□□ -0.72
PDXDC1-216ENST00000569715 ERFP50548 548 aa10.56□□□□□ -0.72
PDXDC1-216ENST00000569715 ACTR1AP61163 376 aa10.56□□□□□ -0.72
PDXDC1-216ENST00000569715 YPEL5P62699 121 aa10.56□□□□□ -0.72
PDXDC1-216ENST00000569715 PCDH1Q08174 1060 aa10.56□□□□□ -0.72
PDXDC1-216ENST00000569715 E2F2Q14209 437 aa10.56□□□□□ -0.72
PDXDC1-216ENST00000569715 KIAA0040Q15053 153 aa10.56□□□□□ -0.72
PDXDC1-216ENST00000569715 MAPRE2Q15555 327 aa10.56□□□□□ -0.72
PDXDC1-216ENST00000569715 CYP2A13Q16696 494 aa10.56□□□□□ -0.72
PDXDC1-216ENST00000569715 PDCD4Q53EL6 469 aaKnown RBP10.56□□□□□ -0.72
PDXDC1-216ENST00000569715 NRROSQ86YC3 692 aa10.56□□□□□ -0.72
PDXDC1-216ENST00000569715 CLHC1Q8NHS4 586 aa10.56□□□□□ -0.72
PDXDC1-216ENST00000569715 SLC5A11Q8WWX8 675 aa10.56□□□□□ -0.72
PDXDC1-216ENST00000569715 APIPQ96GX9 242 aa10.56□□□□□ -0.72
PDXDC1-216ENST00000569715 SLC39A3Q9BRY0 314 aa10.56□□□□□ -0.72
PDXDC1-216ENST00000569715 MMADHCQ9H3L0 296 aaPredicted RBP10.56□□□□□ -0.72
PDXDC1-216ENST00000569715 EFCAB1Q9HAE3 211 aa10.56□□□□□ -0.72
PDXDC1-216ENST00000569715 MRGBPQ9NV56 204 aa10.56□□□□□ -0.72
PDXDC1-216ENST00000569715 GEMIN8Q9NWZ8 242 aaKnown RBP10.56□□□□□ -0.72
PDXDC1-216ENST00000569715 C1orf109Q9NX04 203 aa10.56□□□□□ -0.72
PDXDC1-216ENST00000569715 GPRC5BQ9NZH0 403 aa10.56□□□□□ -0.72
PDXDC1-216ENST00000569715 NOP53Q9NZM5 478 aaKnown RBP10.56□□□□□ -0.72
PDXDC1-216ENST00000569715 BAIAP2L1Q9UHR4 511 aa10.56□□□□□ -0.72
PDXDC1-216ENST00000569715 A0A1W2PPC4 97 aa10.55□□□□□ -0.72
PDXDC1-216ENST00000569715 NRP2O60462 931 aa10.55□□□□□ -0.72
PDXDC1-216ENST00000569715 ENTPD5O75356 428 aa10.55□□□□□ -0.72
PDXDC1-216ENST00000569715 ZNF217O75362 1048 aa10.55□□□□□ -0.72
PDXDC1-216ENST00000569715 CELA2BP08218 269 aaPredicted RBP10.55□□□□□ -0.72
PDXDC1-216ENST00000569715 PCNAP12004 261 aa10.55□□□□□ -0.72
PDXDC1-216ENST00000569715 CASP2P42575 452 aa10.55□□□□□ -0.72
PDXDC1-216ENST00000569715 MRPL19P49406 292 aaKnown RBP10.55□□□□□ -0.72
PDXDC1-216ENST00000569715 LRP8Q14114 963 aa10.55□□□□□ -0.72
PDXDC1-216ENST00000569715 KPNB1Q14974 876 aaKnown RBP10.55□□□□□ -0.72
PDXDC1-216ENST00000569715 MMEL1Q495T6 779 aa10.55□□□□□ -0.72
PDXDC1-216ENST00000569715 BLOC1S3Q6QNY0 202 aa10.55□□□□□ -0.72
PDXDC1-216ENST00000569715 ZFAND4Q86XD8 727 aa10.55□□□□□ -0.72
PDXDC1-216ENST00000569715 LIX1Q8N485 282 aa10.55□□□□□ -0.72
PDXDC1-216ENST00000569715 OR7G3Q8NG95 312 aa10.55□□□□□ -0.72
PDXDC1-216ENST00000569715 WDR41Q9HAD4 459 aa10.55□□□□□ -0.72
PDXDC1-216ENST00000569715 CUEDC1Q9NWM3 386 aaPredicted RBP10.55□□□□□ -0.72
PDXDC1-216ENST00000569715 SDK1Q7Z5N4 2213 aa10.55□□□□□ -0.72
PDXDC1-216ENST00000569715 TRBV23OR9-2A0A075B6M9 112 aa10.55□□□□□ -0.72
PDXDC1-216ENST00000569715 MAGEB17A8MXT2 336 aa10.55□□□□□ -0.72
PDXDC1-216ENST00000569715 H0YIV9 168 aa10.55□□□□□ -0.72
PDXDC1-216ENST00000569715 MRASO14807 208 aa10.55□□□□□ -0.72
PDXDC1-216ENST00000569715 CFLARO15519 480 aa10.55□□□□□ -0.72
PDXDC1-216ENST00000569715 SLC22A3O75751 556 aa10.55□□□□□ -0.72
PDXDC1-216ENST00000569715 THEGLP0DJG4 465 aa10.55□□□□□ -0.72
PDXDC1-216ENST00000569715 MTHFD1P11586 935 aaKnown RBP10.55□□□□□ -0.72
PDXDC1-216ENST00000569715 HNF4AP41235 474 aa10.55□□□□□ -0.72
PDXDC1-216ENST00000569715 RABIFP47224 123 aa10.55□□□□□ -0.72
PDXDC1-216ENST00000569715 RAP1GDS1P52306 607 aa10.55□□□□□ -0.72
PDXDC1-216ENST00000569715 RCAN2Q14206 197 aa10.55□□□□□ -0.72
PDXDC1-216ENST00000569715 SF1Q15637 639 aaKnown RBP10.55□□□□□ -0.72
PDXDC1-216ENST00000569715 SFTPA2Q8IWL1 248 aa10.55□□□□□ -0.72
PDXDC1-216ENST00000569715 SPEM1Q8N4L4 309 aa10.55□□□□□ -0.72
PDXDC1-216ENST00000569715 OR52E1Q8NGJ3 308 aa10.55□□□□□ -0.72
PDXDC1-216ENST00000569715 CLDN23Q96B33 292 aa10.55□□□□□ -0.72
PDXDC1-216ENST00000569715 CCDC124Q96CT7 223 aaKnown RBP10.55□□□□□ -0.72
PDXDC1-216ENST00000569715 NELL2Q99435 816 aa10.55□□□□□ -0.72
PDXDC1-216ENST00000569715 MRPL1Q9BYD6 325 aaKnown RBP10.55□□□□□ -0.72
PDXDC1-216ENST00000569715 ICKQ9UPZ9 632 aa10.55□□□□□ -0.72
PDXDC1-216ENST00000569715 CACNA1IQ9P0X4 2223 aa10.55□□□□□ -0.72
PDXDC1-216ENST00000569715 PIPSLA2A3N6 862 aa10.55□□□□□ -0.72
PDXDC1-216ENST00000569715 TNFRSF10CO14798 259 aa10.55□□□□□ -0.72
PDXDC1-216ENST00000569715 PI15O43692 258 aa10.55□□□□□ -0.72
PDXDC1-216ENST00000569715 KCNJ13O60928 360 aa10.55□□□□□ -0.72
PDXDC1-216ENST00000569715 ATP6V1G2O95670 118 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms