RNA–Protein interactions for RNA: ENST00000568290.1

ATXN3-250, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 671 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-250ENST00000568290 TOR1AIP1Q5JTV8 583 aa7.43□□□□□ -1.22
ATXN3-250ENST00000568290 SPANXN4Q5MJ08 99 aa7.43□□□□□ -1.22
ATXN3-250ENST00000568290 LDLRAP1Q5SW96 308 aa7.43□□□□□ -1.22
ATXN3-250ENST00000568290 MLIPQ5VWP3 458 aa7.43□□□□□ -1.22
ATXN3-250ENST00000568290 KIAA1614Q5VZ46 1190 aa7.43□□□□□ -1.22
ATXN3-250ENST00000568290 FRG2Q64ET8 278 aa7.43□□□□□ -1.22
ATXN3-250ENST00000568290 CAPN13Q6MZZ7 669 aaPredicted RBP7.43□□□□□ -1.22
ATXN3-250ENST00000568290 CXorf57Q6NSI4 855 aaKnown RBP7.43□□□□□ -1.22
ATXN3-250ENST00000568290 TRIM40Q6P9F5 258 aa7.43□□□□□ -1.22
ATXN3-250ENST00000568290 BRAT1Q6PJG6 821 aa7.43□□□□□ -1.22
ATXN3-250ENST00000568290 FAM151BQ6UXP7 276 aa7.43□□□□□ -1.22
ATXN3-250ENST00000568290 DCDC5Q6ZRR9 648 aa7.43□□□□□ -1.22
ATXN3-250ENST00000568290 CCDC149Q6ZUS6 474 aa7.43□□□□□ -1.22
ATXN3-250ENST00000568290 KRT73Q86Y46 540 aa7.43□□□□□ -1.22
ATXN3-250ENST00000568290 DCP2Q8IU60 420 aaKnown RBP7.43□□□□□ -1.22
ATXN3-250ENST00000568290 LACC1Q8IV20 430 aa7.43□□□□□ -1.22
ATXN3-250ENST00000568290 FAM217AQ8IXS0 508 aa7.43□□□□□ -1.22
ATXN3-250ENST00000568290 TTC29Q8NA56 475 aaPredicted RBP7.43□□□□□ -1.22
ATXN3-250ENST00000568290 ATG16L2Q8NAA4 619 aa7.43□□□□□ -1.22
ATXN3-250ENST00000568290 GALNT6Q8NCL4 622 aa7.43□□□□□ -1.22
ATXN3-250ENST00000568290 ZNF540Q8NDQ6 660 aa7.43□□□□□ -1.22
ATXN3-250ENST00000568290 CHDHQ8NE62 594 aaPredicted RBP7.43□□□□□ -1.22
ATXN3-250ENST00000568290 FIBINQ8TAL6 211 aa7.43□□□□□ -1.22
ATXN3-250ENST00000568290 PHF10Q8WUB8 498 aaKnown RBP7.43□□□□□ -1.22
ATXN3-250ENST00000568290 PPP1R13LQ8WUF5 828 aa7.43□□□□□ -1.22
ATXN3-250ENST00000568290 CHTF18Q8WVB6 975 aa7.43□□□□□ -1.22
ATXN3-250ENST00000568290 SKA2Q8WVK7 121 aaPredicted RBP7.43□□□□□ -1.22
ATXN3-250ENST00000568290 PIH1D2Q8WWB5 315 aa7.43□□□□□ -1.22
ATXN3-250ENST00000568290 RASSF5Q8WWW0 418 aa7.43□□□□□ -1.22
ATXN3-250ENST00000568290 HPS1Q92902 700 aa7.43□□□□□ -1.22
ATXN3-250ENST00000568290 FBXL8Q96CD0 374 aa7.43□□□□□ -1.22
ATXN3-250ENST00000568290 MTERF3Q96E29 417 aa7.43□□□□□ -1.22
ATXN3-250ENST00000568290 TMEM169Q96HH4 297 aa7.43□□□□□ -1.22
ATXN3-250ENST00000568290 LRIG1Q96JA1 1093 aa7.43□□□□□ -1.22
ATXN3-250ENST00000568290 FRG2BQ96QU4 278 aa7.43□□□□□ -1.22
ATXN3-250ENST00000568290 PANX1Q96RD7 426 aa7.43□□□□□ -1.22
ATXN3-250ENST00000568290 CPPED1Q9BRF8 314 aaPredicted RBP7.43□□□□□ -1.22
ATXN3-250ENST00000568290 GPR62Q9BZJ7 368 aa7.43□□□□□ -1.22
ATXN3-250ENST00000568290 NSUN3Q9H649 340 aaKnown RBP7.43□□□□□ -1.22
ATXN3-250ENST00000568290 SYNDIG1Q9H7V2 258 aa7.43□□□□□ -1.22
ATXN3-250ENST00000568290 SIAEQ9HAT2 523 aa7.43□□□□□ -1.22
ATXN3-250ENST00000568290 NTN4Q9HB63 628 aa7.43□□□□□ -1.22
ATXN3-250ENST00000568290 BPIFA1Q9NP55 256 aa7.43□□□□□ -1.22
ATXN3-250ENST00000568290 FBXO8Q9NRD0 319 aa7.43□□□□□ -1.22
ATXN3-250ENST00000568290 MRPL17Q9NRX2 175 aaKnown RBP7.43□□□□□ -1.22
ATXN3-250ENST00000568290 KRT84Q9NSB2 600 aa7.43□□□□□ -1.22
ATXN3-250ENST00000568290 TRMT13Q9NUP7 481 aaKnown RBP7.43□□□□□ -1.22
ATXN3-250ENST00000568290 RHBDL2Q9NX52 303 aa7.43□□□□□ -1.22
ATXN3-250ENST00000568290 THUMPD1Q9NXG2 353 aaKnown RBP7.43□□□□□ -1.22
ATXN3-250ENST00000568290 AHSPQ9NZD4 102 aa7.43□□□□□ -1.22
ATXN3-250ENST00000568290 VAPAQ9P0L0 249 aa7.43□□□□□ -1.22
ATXN3-250ENST00000568290 NFKBIL1Q9UBC1 381 aaPredicted RBP7.43□□□□□ -1.22
ATXN3-250ENST00000568290 VPS29Q9UBQ0 182 aa7.43□□□□□ -1.22
ATXN3-250ENST00000568290 VPS51Q9UID3 782 aa7.43□□□□□ -1.22
ATXN3-250ENST00000568290 ZNF225Q9UK10 706 aa7.43□□□□□ -1.22
ATXN3-250ENST00000568290 FAM32AQ9Y421 112 aaKnown RBP7.43□□□□□ -1.22
ATXN3-250ENST00000568290 PTGDR2Q9Y5Y4 395 aa7.43□□□□□ -1.22
ATXN3-250ENST00000568290 TRBV5-3A0A0A0MS03 114 aa7.42□□□□□ -1.22
ATXN3-250ENST00000568290 TRAV19A0A0A6YYK7 116 aa7.42□□□□□ -1.22
ATXN3-250ENST00000568290 A0A1B0GVG6 124 aa7.42□□□□□ -1.22
ATXN3-250ENST00000568290 TMEM247A6NEH6 219 aa7.42□□□□□ -1.22
ATXN3-250ENST00000568290 MGAT4DA6NG13 374 aa7.42□□□□□ -1.22
ATXN3-250ENST00000568290 CLIC1O00299 241 aa7.42□□□□□ -1.22
ATXN3-250ENST00000568290 UPK1AO00322 258 aa7.42□□□□□ -1.22
ATXN3-250ENST00000568290 PLOD2O00469 737 aa7.42□□□□□ -1.22
ATXN3-250ENST00000568290 FPGTO14772 594 aa7.42□□□□□ -1.22
ATXN3-250ENST00000568290 DFNA5O60443 496 aa7.42□□□□□ -1.22
ATXN3-250ENST00000568290 FAM20BO75063 409 aa7.42□□□□□ -1.22
ATXN3-250ENST00000568290 CNOT3O75175 753 aaKnown RBP7.42□□□□□ -1.22
ATXN3-250ENST00000568290 ABLIM3O94929 683 aa7.42□□□□□ -1.22
ATXN3-250ENST00000568290 MED26O95402 600 aa7.42□□□□□ -1.22
ATXN3-250ENST00000568290 KRT75O95678 551 aa7.42□□□□□ -1.22
ATXN3-250ENST00000568290 ZNF682O95780 498 aa7.42□□□□□ -1.22
ATXN3-250ENST00000568290 UGT2B4P06133 528 aa7.42□□□□□ -1.22
ATXN3-250ENST00000568290 COX7A2P14406 83 aa7.42□□□□□ -1.22
ATXN3-250ENST00000568290 ATP1B2P14415 290 aaPredicted RBP7.42□□□□□ -1.22
ATXN3-250ENST00000568290 CD1EP15812 388 aa7.42□□□□□ -1.22
ATXN3-250ENST00000568290 GPX2P18283 190 aa7.42□□□□□ -1.22
ATXN3-250ENST00000568290 NELFEP18615 380 aaKnown RBP7.42□□□□□ -1.22
ATXN3-250ENST00000568290 LAG3P18627 525 aa7.42□□□□□ -1.22
ATXN3-250ENST00000568290 ATF6P18850 670 aa7.42□□□□□ -1.22
ATXN3-250ENST00000568290 PRDX3P30048 256 aaKnown RBP7.42□□□□□ -1.22
ATXN3-250ENST00000568290 SERPINB1P30740 379 aa7.42□□□□□ -1.22
ATXN3-250ENST00000568290 KDELR2P33947 212 aa7.42□□□□□ -1.22
ATXN3-250ENST00000568290 OR1D2P34982 312 aa7.42□□□□□ -1.22
ATXN3-250ENST00000568290 HALP42357 657 aa7.42□□□□□ -1.22
ATXN3-250ENST00000568290 CLK1P49759 484 aaKnown RBP7.42□□□□□ -1.22
ATXN3-250ENST00000568290 PGFP49763 221 aa7.42□□□□□ -1.22
ATXN3-250ENST00000568290 SMCPP49901 116 aaPredicted RBP7.42□□□□□ -1.22
ATXN3-250ENST00000568290 BCAP31P51572 246 aa7.42□□□□□ -1.22
ATXN3-250ENST00000568290 DGKQP52824 942 aa7.42□□□□□ -1.22
ATXN3-250ENST00000568290 ITGA1P56199 1179 aa7.42□□□□□ -1.22
ATXN3-250ENST00000568290 ISL1P61371 349 aa7.42□□□□□ -1.22
ATXN3-250ENST00000568290 ZNF45Q02386 682 aa7.42□□□□□ -1.22
ATXN3-250ENST00000568290 SP3Q02447 781 aa7.42□□□□□ -1.22
ATXN3-250ENST00000568290 CDK5R2Q13319 367 aa7.42□□□□□ -1.22
ATXN3-250ENST00000568290 GTF2H3Q13889 308 aa7.42□□□□□ -1.22
ATXN3-250ENST00000568290 RAB33AQ14088 237 aa7.42□□□□□ -1.22
ATXN3-250ENST00000568290 MBTPS1Q14703 1052 aa7.42□□□□□ -1.22
ATXN3-250ENST00000568290 PTPRCAPQ14761 206 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms