RNA–Protein interactions for RNA: ENST00000568239.1

SMG1-215, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 2,978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-215ENST00000568239 PIGGQ5H8A4 983 aa6.84□□□□□ -1.32
SMG1-215ENST00000568239 PAGE3Q5JUK9 113 aa6.84□□□□□ -1.32
SMG1-215ENST00000568239 C6orf10Q5SRN2 563 aa6.84□□□□□ -1.32
SMG1-215ENST00000568239 PRAMEF14Q5SWL7 426 aa6.84□□□□□ -1.32
SMG1-215ENST00000568239 PRAMEF13Q5VWM6 474 aa6.84□□□□□ -1.32
SMG1-215ENST00000568239 IFNEQ86WN2 208 aa6.84□□□□□ -1.32
SMG1-215ENST00000568239 OXR1Q8N573 874 aa6.84□□□□□ -1.32
SMG1-215ENST00000568239 KRTCAP2Q8N6L1 136 aa6.84□□□□□ -1.32
SMG1-215ENST00000568239 FBXO15Q8NCQ5 510 aaPredicted RBP6.84□□□□□ -1.32
SMG1-215ENST00000568239 OR2T34Q8NGX1 318 aa6.84□□□□□ -1.32
SMG1-215ENST00000568239 HHIPQ96QV1 700 aa6.84□□□□□ -1.32
SMG1-215ENST00000568239 INSM2Q96T92 566 aaPredicted RBP6.84□□□□□ -1.32
SMG1-215ENST00000568239 TPSD1Q9BZJ3 242 aa6.84□□□□□ -1.32
SMG1-215ENST00000568239 PCDHAC1Q9H158 963 aa6.84□□□□□ -1.32
SMG1-215ENST00000568239 XKR8Q9H6D3 395 aa6.84□□□□□ -1.32
SMG1-215ENST00000568239 PRDM8Q9NQV8 689 aa6.84□□□□□ -1.32
SMG1-215ENST00000568239 GID8Q9NWU2 228 aa6.84□□□□□ -1.32
SMG1-215ENST00000568239 C2orf42Q9NWW7 574 aa6.84□□□□□ -1.32
SMG1-215ENST00000568239 SLAMF8Q9P0V8 285 aa6.84□□□□□ -1.32
SMG1-215ENST00000568239 EBF1Q9UH73 591 aa6.84□□□□□ -1.32
SMG1-215ENST00000568239 TAC3Q9UHF0 121 aa6.84□□□□□ -1.32
SMG1-215ENST00000568239 PCDHGA11Q9Y5H2 935 aa6.84□□□□□ -1.32
SMG1-215ENST00000568239 DNMT3AQ9Y6K1 912 aaPredicted RBP6.84□□□□□ -1.32
SMG1-215ENST00000568239 TRBV23OR9-2A0A075B6M9 112 aa6.83□□□□□ -1.32
SMG1-215ENST00000568239 PRSS38A1L453 326 aa6.83□□□□□ -1.32
SMG1-215ENST00000568239 FAM234BA2RU67 622 aa6.83□□□□□ -1.32
SMG1-215ENST00000568239 MAGEB17A8MXT2 336 aa6.83□□□□□ -1.32
SMG1-215ENST00000568239 AXIN1O15169 862 aa6.83□□□□□ -1.32
SMG1-215ENST00000568239 PI15O43692 258 aa6.83□□□□□ -1.32
SMG1-215ENST00000568239 UGDHO60701 494 aa6.83□□□□□ -1.32
SMG1-215ENST00000568239 RASGRP1O95267 797 aa6.83□□□□□ -1.32
SMG1-215ENST00000568239 BCKDHAP12694 445 aa6.83□□□□□ -1.32
SMG1-215ENST00000568239 AK4P27144 223 aaPredicted RBP6.83□□□□□ -1.32
SMG1-215ENST00000568239 AP2B1P63010 937 aa6.83□□□□□ -1.32
SMG1-215ENST00000568239 YBX1P67809 324 aaKnown RBP6.83□□□□□ -1.32
SMG1-215ENST00000568239 MS4A2Q01362 244 aa6.83□□□□□ -1.32
SMG1-215ENST00000568239 SLBPQ14493 270 aaKnown RBP eCLIP6.83□□□□□ -1.32
SMG1-215ENST00000568239 ZNF423Q2M1K9 1284 aa6.83□□□□□ -1.32
SMG1-215ENST00000568239 FAM174BQ3ZCQ3 159 aa6.83□□□□□ -1.32
SMG1-215ENST00000568239 GRHL2Q6ISB3 625 aa6.83□□□□□ -1.32
SMG1-215ENST00000568239 MED27Q6P2C8 311 aa6.83□□□□□ -1.32
SMG1-215ENST00000568239 SLC2A7Q6PXP3 512 aa6.83□□□□□ -1.32
SMG1-215ENST00000568239 ZFAND4Q86XD8 727 aa6.83□□□□□ -1.32
SMG1-215ENST00000568239 PHACTR4Q8IZ21 702 aa6.83□□□□□ -1.32
SMG1-215ENST00000568239 FRMD1Q8N878 549 aa6.83□□□□□ -1.32
SMG1-215ENST00000568239 GPR156Q8NFN8 814 aa6.83□□□□□ -1.32
SMG1-215ENST00000568239 OR7G3Q8NG95 312 aa6.83□□□□□ -1.32
SMG1-215ENST00000568239 HUS1BQ8NHY5 278 aa6.83□□□□□ -1.32
SMG1-215ENST00000568239 SLC5A11Q8WWX8 675 aa6.83□□□□□ -1.32
SMG1-215ENST00000568239 FAM131CQ96AQ9 280 aa6.83□□□□□ -1.32
SMG1-215ENST00000568239 ROPN1LQ96C74 230 aa6.83□□□□□ -1.32
SMG1-215ENST00000568239 LRRC58Q96CX6 371 aa6.83□□□□□ -1.32
SMG1-215ENST00000568239 MAGEB10Q96LZ2 347 aaPredicted RBP6.83□□□□□ -1.32
SMG1-215ENST00000568239 ACTL8Q9H568 366 aa6.83□□□□□ -1.32
SMG1-215ENST00000568239 C6orf106Q9H6K1 298 aaPredicted RBP6.83□□□□□ -1.32
SMG1-215ENST00000568239 VPS29Q9UBQ0 182 aa6.83□□□□□ -1.32
SMG1-215ENST00000568239 LEF1Q9UJU2 399 aaPredicted RBP6.83□□□□□ -1.32
SMG1-215ENST00000568239 SLC17A4Q9Y2C5 497 aa6.83□□□□□ -1.32
SMG1-215ENST00000568239 DLGAP4Q9Y2H0 992 aa6.83□□□□□ -1.32
SMG1-215ENST00000568239 PRAMEF33A0A0G2JMD5 474 aa6.83□□□□□ -1.32
SMG1-215ENST00000568239 PRORSD1PA6NEY8 169 aa6.83□□□□□ -1.32
SMG1-215ENST00000568239 SAP18O00422 153 aaKnown RBP6.83□□□□□ -1.32
SMG1-215ENST00000568239 AKAP10O43572 662 aa6.83□□□□□ -1.32
SMG1-215ENST00000568239 ANP32DO95626 131 aa6.83□□□□□ -1.32
SMG1-215ENST00000568239 CHRNB1P11230 501 aa6.83□□□□□ -1.32
SMG1-215ENST00000568239 TEAD1P28347 426 aa6.83□□□□□ -1.32
SMG1-215ENST00000568239 AKT2P31751 481 aa6.83□□□□□ -1.32
SMG1-215ENST00000568239 DGKEP52429 567 aa6.83□□□□□ -1.32
SMG1-215ENST00000568239 ACSM2AQ08AH3 577 aa6.83□□□□□ -1.32
SMG1-215ENST00000568239 CCNIQ14094 377 aa6.83□□□□□ -1.32
SMG1-215ENST00000568239 CLCA4Q14CN2 919 aa6.83□□□□□ -1.32
SMG1-215ENST00000568239 RBBP5Q15291 538 aaKnown RBP6.83□□□□□ -1.32
SMG1-215ENST00000568239 HIST2H2ACQ16777 129 aaPredicted RBP6.83□□□□□ -1.32
SMG1-215ENST00000568239 ACSM2BQ68CK6 577 aa6.83□□□□□ -1.32
SMG1-215ENST00000568239 HIST2H2AA3Q6FI13 130 aa6.83□□□□□ -1.32
SMG1-215ENST00000568239 SLC30A9Q6PML9 568 aa6.83□□□□□ -1.32
SMG1-215ENST00000568239 DNAJC14Q6Y2X3 702 aaPredicted RBP6.83□□□□□ -1.32
SMG1-215ENST00000568239 SLCO4C1Q6ZQN7 724 aa6.83□□□□□ -1.32
SMG1-215ENST00000568239 ADCK2Q7Z695 626 aa6.83□□□□□ -1.32
SMG1-215ENST00000568239 SPATA24Q86W54 205 aa6.83□□□□□ -1.32
SMG1-215ENST00000568239 HID1Q8IV36 788 aa6.83□□□□□ -1.32
SMG1-215ENST00000568239 RAB42Q8N4Z0 105 aa6.83□□□□□ -1.32
SMG1-215ENST00000568239 BHLHE22Q8NFJ8 381 aaPredicted RBP6.83□□□□□ -1.32
SMG1-215ENST00000568239 TSTD1Q8NFU3 115 aa6.83□□□□□ -1.32
SMG1-215ENST00000568239 OR1E3Q8WZA6 343 aa6.83□□□□□ -1.32
SMG1-215ENST00000568239 CMTM7Q96FZ5 175 aa6.83□□□□□ -1.32
SMG1-215ENST00000568239 TOE1Q96GM8 510 aaKnown RBP6.83□□□□□ -1.32
SMG1-215ENST00000568239 EGLN2Q96KS0 407 aa6.83□□□□□ -1.32
SMG1-215ENST00000568239 BMFQ96LC9 184 aa6.83□□□□□ -1.32
SMG1-215ENST00000568239 GPR174Q9BXC1 333 aa6.83□□□□□ -1.32
SMG1-215ENST00000568239 FOXQ1Q9C009 403 aa6.83□□□□□ -1.32
SMG1-215ENST00000568239 PIF1Q9H611 641 aa6.83□□□□□ -1.32
SMG1-215ENST00000568239 RMI1Q9H9A7 625 aa6.83□□□□□ -1.32
SMG1-215ENST00000568239 SLC2A4RGQ9NR83 387 aa6.83□□□□□ -1.32
SMG1-215ENST00000568239 COL4A2P08572 1712 aa6.83□□□□□ -1.32
SMG1-215ENST00000568239 HEATR5BQ9P2D3 2071 aa6.82□□□□□ -1.32
SMG1-215ENST00000568239 TRIM38O00635 465 aa6.82□□□□□ -1.32
SMG1-215ENST00000568239 TGFB1P01137 390 aa6.82□□□□□ -1.32
SMG1-215ENST00000568239 C1GALT1C1LP0DN25 315 aa6.82□□□□□ -1.32
SMG1-215ENST00000568239 CDH1P12830 882 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms