RNA–Protein interactions for RNA: ENST00000567071.5

CAPN3-216, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-216ENST00000567071 CTAGE8P0CG41 777 aa9.25□□□□□ -0.93
CAPN3-216ENST00000567071 CD46P15529 392 aa9.25□□□□□ -0.93
CAPN3-216ENST00000567071 ZNF24P17028 368 aa9.25□□□□□ -0.93
CAPN3-216ENST00000567071 ERCC2P18074 760 aa9.25□□□□□ -0.93
CAPN3-216ENST00000567071 CXCR2P25025 360 aa9.25□□□□□ -0.93
CAPN3-216ENST00000567071 HCAR3P49019 387 aa9.25□□□□□ -0.93
CAPN3-216ENST00000567071 ZNF135P52742 658 aaPredicted RBP9.25□□□□□ -0.93
CAPN3-216ENST00000567071 ARSFP54793 590 aa9.25□□□□□ -0.93
CAPN3-216ENST00000567071 LSM11P83369 360 aaKnown RBP eCLIP9.25□□□□□ -0.93
CAPN3-216ENST00000567071 KCTD19Q17RG1 926 aaPredicted RBP9.25□□□□□ -0.93
CAPN3-216ENST00000567071 DEFB110Q30KQ9 67 aa9.25□□□□□ -0.93
CAPN3-216ENST00000567071 FLYWCH1Q4VC44 716 aa9.25□□□□□ -0.93
CAPN3-216ENST00000567071 SLC9A4Q6AI14 798 aa9.25□□□□□ -0.93
CAPN3-216ENST00000567071 TMCO3Q6UWJ1 677 aa9.25□□□□□ -0.93
CAPN3-216ENST00000567071 PRSS57Q6UWY2 283 aa9.25□□□□□ -0.93
CAPN3-216ENST00000567071 NDUFAF7Q7L592 441 aa9.25□□□□□ -0.93
CAPN3-216ENST00000567071 CTAGE6Q86UF2 777 aa9.25□□□□□ -0.93
CAPN3-216ENST00000567071 VSIG1Q86XK7 387 aa9.25□□□□□ -0.93
CAPN3-216ENST00000567071 ZNF547Q8IVP9 402 aa9.25□□□□□ -0.93
CAPN3-216ENST00000567071 CTAGE4Q8IX94 777 aa9.25□□□□□ -0.93
CAPN3-216ENST00000567071 KLHL7Q8IXQ5 586 aa9.25□□□□□ -0.93
CAPN3-216ENST00000567071 MARVELD2Q8N4S9 558 aa9.25□□□□□ -0.93
CAPN3-216ENST00000567071 NPWQ8N729 165 aa9.25□□□□□ -0.93
CAPN3-216ENST00000567071 BEND7Q8N7W2 519 aaPredicted RBP9.25□□□□□ -0.93
CAPN3-216ENST00000567071 PRELID2Q8N945 189 aa9.25□□□□□ -0.93
CAPN3-216ENST00000567071 MNS1Q8NEH6 495 aa9.25□□□□□ -0.93
CAPN3-216ENST00000567071 SPATA4Q8NEY3 305 aa9.25□□□□□ -0.93
CAPN3-216ENST00000567071 OR10Q1Q8NGQ4 319 aa9.25□□□□□ -0.93
CAPN3-216ENST00000567071 ACTL9Q8TC94 416 aa9.25□□□□□ -0.93
CAPN3-216ENST00000567071 FAM222BQ8WU58 562 aa9.25□□□□□ -0.93
CAPN3-216ENST00000567071 LRRN4Q8WUT4 740 aa9.25□□□□□ -0.93
CAPN3-216ENST00000567071 LCN9Q8WX39 176 aa9.25□□□□□ -0.93
CAPN3-216ENST00000567071 LRRC46Q96FV0 321 aa9.25□□□□□ -0.93
CAPN3-216ENST00000567071 MGME1Q9BQP7 344 aa9.25□□□□□ -0.93
CAPN3-216ENST00000567071 DDX47Q9H0S4 455 aaKnown RBP9.25□□□□□ -0.93
CAPN3-216ENST00000567071 SLC26A1Q9H2B4 701 aa9.25□□□□□ -0.93
CAPN3-216ENST00000567071 KLHL1Q9NR64 748 aa9.25□□□□□ -0.93
CAPN3-216ENST00000567071 RAD18Q9NS91 495 aa9.25□□□□□ -0.93
CAPN3-216ENST00000567071 RIC8BQ9NVN3 520 aa9.25□□□□□ -0.93
CAPN3-216ENST00000567071 CRIM1Q9NZV1 1036 aa9.25□□□□□ -0.93
CAPN3-216ENST00000567071 RNF14Q9UBS8 474 aa9.25□□□□□ -0.93
CAPN3-216ENST00000567071 GNPTGQ9UJJ9 305 aa9.25□□□□□ -0.93
CAPN3-216ENST00000567071 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.25□□□□□ -0.93
CAPN3-216ENST00000567071 DNAJC13O75165 2243 aa9.24□□□□□ -0.93
CAPN3-216ENST00000567071 ASPDHA6ND91 283 aa9.24□□□□□ -0.93
CAPN3-216ENST00000567071 C2orf74A8MZ97 194 aa9.24□□□□□ -0.93
CAPN3-216ENST00000567071 APOC4-APOC2K7ER74 178 aa9.24□□□□□ -0.93
CAPN3-216ENST00000567071 ZNHIT1O43257 154 aa9.24□□□□□ -0.93
CAPN3-216ENST00000567071 KCNAB3O43448 404 aa9.24□□□□□ -0.93
CAPN3-216ENST00000567071 PHF2O75151 1096 aa9.24□□□□□ -0.93
CAPN3-216ENST00000567071 MTX2O75431 263 aa9.24□□□□□ -0.93
CAPN3-216ENST00000567071 SLU7O95391 586 aaKnown RBP9.24□□□□□ -0.93
CAPN3-216ENST00000567071 APOC2P02655 101 aa9.24□□□□□ -0.93
CAPN3-216ENST00000567071 ICAM2P13598 275 aa9.24□□□□□ -0.93
CAPN3-216ENST00000567071 CD53P19397 219 aa9.24□□□□□ -0.93
CAPN3-216ENST00000567071 UGT1A1P22309 533 aa9.24□□□□□ -0.93
CAPN3-216ENST00000567071 DLX5P56178 289 aa9.24□□□□□ -0.93
CAPN3-216ENST00000567071 MAXP61244 160 aa9.24□□□□□ -0.93
CAPN3-216ENST00000567071 MRPS25P82663 173 aaKnown RBP9.24□□□□□ -0.93
CAPN3-216ENST00000567071 ITKQ08881 620 aa9.24□□□□□ -0.93
CAPN3-216ENST00000567071 PMPCAQ10713 525 aa9.24□□□□□ -0.93
CAPN3-216ENST00000567071 ALS2CLQ60I27 953 aa9.24□□□□□ -0.93
CAPN3-216ENST00000567071 TIGD7Q6NT04 549 aaPredicted RBP9.24□□□□□ -0.93
CAPN3-216ENST00000567071 ARHGAP36Q6ZRI8 547 aa9.24□□□□□ -0.93
CAPN3-216ENST00000567071 TTLL10Q6ZVT0 673 aa9.24□□□□□ -0.93
CAPN3-216ENST00000567071 NEK10Q6ZWH5 1172 aa9.24□□□□□ -0.93
CAPN3-216ENST00000567071 NLRP9Q7RTR0 991 aa9.24□□□□□ -0.93
CAPN3-216ENST00000567071 ZNF572Q7Z3I7 529 aaPredicted RBP9.24□□□□□ -0.93
CAPN3-216ENST00000567071 SIAH3Q8IW03 269 aa9.24□□□□□ -0.93
CAPN3-216ENST00000567071 ULK2Q8IYT8 1036 aa9.24□□□□□ -0.93
CAPN3-216ENST00000567071 LRRC75A-AS1Q8N1F1 130 aa9.24□□□□□ -0.93
CAPN3-216ENST00000567071 VWA5B2Q8N398 1253 aa9.24□□□□□ -0.93
CAPN3-216ENST00000567071 CEP112Q8N8E3 955 aa9.24□□□□□ -0.93
CAPN3-216ENST00000567071 C19orf47Q8N9M1 422 aaKnown RBP9.24□□□□□ -0.93
CAPN3-216ENST00000567071 NOA1Q8NC60 698 aaKnown RBP9.24□□□□□ -0.93
CAPN3-216ENST00000567071 GDAP1Q8TB36 358 aa9.24□□□□□ -0.93
CAPN3-216ENST00000567071 MAIP1Q8WWC4 291 aa9.24□□□□□ -0.93
CAPN3-216ENST00000567071 P3H4Q92791 437 aa9.24□□□□□ -0.93
CAPN3-216ENST00000567071 FRMD6Q96NE9 622 aa9.24□□□□□ -0.93
CAPN3-216ENST00000567071 SMIM14Q96QK8 99 aa9.24□□□□□ -0.93
CAPN3-216ENST00000567071 KRT12Q99456 494 aa9.24□□□□□ -0.93
CAPN3-216ENST00000567071 ZCCHC2Q9C0B9 1178 aaKnown RBP9.24□□□□□ -0.93
CAPN3-216ENST00000567071 SLC22A11Q9NSA0 550 aa9.24□□□□□ -0.93
CAPN3-216ENST00000567071 EFR3BQ9Y2G0 817 aa9.24□□□□□ -0.93
CAPN3-216ENST00000567071 ASB1Q9Y576 335 aa9.24□□□□□ -0.93
CAPN3-216ENST00000567071 HEBP2Q9Y5Z4 205 aa9.24□□□□□ -0.93
CAPN3-216ENST00000567071 MPDZO75970 2070 aa9.24□□□□□ -0.93
CAPN3-216ENST00000567071 H7C0C1 242 aa9.23□□□□□ -0.93
CAPN3-216ENST00000567071 CCDC188H7C350 402 aa9.23□□□□□ -0.93
CAPN3-216ENST00000567071 LIASO43766 372 aa9.23□□□□□ -0.93
CAPN3-216ENST00000567071 FZD6O60353 706 aa9.23□□□□□ -0.93
CAPN3-216ENST00000567071 SLC35G4P0C7Q5 338 aa9.23□□□□□ -0.93
CAPN3-216ENST00000567071 ZFXP17010 805 aaPredicted RBP9.23□□□□□ -0.93
CAPN3-216ENST00000567071 SERPINB6P35237 376 aa9.23□□□□□ -0.93
CAPN3-216ENST00000567071 MMP13P45452 471 aa9.23□□□□□ -0.93
CAPN3-216ENST00000567071 ATP5OP48047 213 aa9.23□□□□□ -0.93
CAPN3-216ENST00000567071 KCNJ1P48048 391 aa9.23□□□□□ -0.93
CAPN3-216ENST00000567071 EIF3EP60228 445 aaKnown RBP9.23□□□□□ -0.93
CAPN3-216ENST00000567071 TMPRSS15P98073 1019 aa9.23□□□□□ -0.93
CAPN3-216ENST00000567071 OCA2Q04671 838 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms