RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 COMTP21964 271 aa8.6□□□□□ -1.03
VPS9D1-205ENST00000565452 IL1R2P27930 398 aa8.6□□□□□ -1.03
VPS9D1-205ENST00000565452 CD96P40200 585 aa8.6□□□□□ -1.03
VPS9D1-205ENST00000565452 SSR1P43307 286 aaKnown RBP8.6□□□□□ -1.03
VPS9D1-205ENST00000565452 COPS2P61201 443 aa8.6□□□□□ -1.03
VPS9D1-205ENST00000565452 NKX6-1P78426 367 aaPredicted RBP8.6□□□□□ -1.03
VPS9D1-205ENST00000565452 HSF1Q00613 529 aa8.6□□□□□ -1.03
VPS9D1-205ENST00000565452 AP1B1Q10567 949 aa8.6□□□□□ -1.03
VPS9D1-205ENST00000565452 PMPCAQ10713 525 aa8.6□□□□□ -1.03
VPS9D1-205ENST00000565452 KIR2DS3Q14952 304 aa8.6□□□□□ -1.03
VPS9D1-205ENST00000565452 PAFAH1B3Q15102 231 aaKnown RBP8.6□□□□□ -1.03
VPS9D1-205ENST00000565452 PCSK7Q16549 785 aa8.6□□□□□ -1.03
VPS9D1-205ENST00000565452 PRMT9Q6P2P2 845 aa8.6□□□□□ -1.03
VPS9D1-205ENST00000565452 PAMR1Q6UXH9 720 aa8.6□□□□□ -1.03
VPS9D1-205ENST00000565452 FAM151BQ6UXP7 276 aa8.6□□□□□ -1.03
VPS9D1-205ENST00000565452 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.6□□□□□ -1.03
VPS9D1-205ENST00000565452 CCDC71Q8IV32 467 aaPredicted RBP8.6□□□□□ -1.03
VPS9D1-205ENST00000565452 CHERPQ8IWX8 916 aaKnown RBP8.6□□□□□ -1.03
VPS9D1-205ENST00000565452 RCOR2Q8IZ40 523 aa8.6□□□□□ -1.03
VPS9D1-205ENST00000565452 CPSF7Q8N684 471 aaKnown RBP8.6□□□□□ -1.03
VPS9D1-205ENST00000565452 LILRA3Q8N6C8 439 aaPredicted RBP8.6□□□□□ -1.03
VPS9D1-205ENST00000565452 KCTD6Q8NC69 237 aa8.6□□□□□ -1.03
VPS9D1-205ENST00000565452 PWWP2AQ96N64 755 aa8.6□□□□□ -1.03
VPS9D1-205ENST00000565452 FRMD6Q96NE9 622 aa8.6□□□□□ -1.03
VPS9D1-205ENST00000565452 ALS2CR12Q96Q35 445 aa8.6□□□□□ -1.03
VPS9D1-205ENST00000565452 SECISBP2Q96T21 854 aaKnown RBP8.6□□□□□ -1.03
VPS9D1-205ENST00000565452 DESI2Q9BSY9 194 aa8.6□□□□□ -1.03
VPS9D1-205ENST00000565452 ZNF700Q9H0M5 742 aa8.6□□□□□ -1.03
VPS9D1-205ENST00000565452 TP63Q9H3D4 680 aaPredicted RBP8.6□□□□□ -1.03
VPS9D1-205ENST00000565452 POLG2Q9UHN1 485 aa8.6□□□□□ -1.03
VPS9D1-205ENST00000565452 GUCA1BQ9UMX6 200 aa8.6□□□□□ -1.03
VPS9D1-205ENST00000565452 EFR3BQ9Y2G0 817 aa8.6□□□□□ -1.03
VPS9D1-205ENST00000565452 PKP3Q9Y446 797 aa8.6□□□□□ -1.03
VPS9D1-205ENST00000565452 L3MBTL1Q9Y468 752 aa8.6□□□□□ -1.03
VPS9D1-205ENST00000565452 PCDHA3Q9Y5H8 950 aa8.6□□□□□ -1.03
VPS9D1-205ENST00000565452 GTF3C1Q12789 2109 aa8.59□□□□□ -1.03
VPS9D1-205ENST00000565452 INAFM1C9JVW0 142 aa8.59□□□□□ -1.03
VPS9D1-205ENST00000565452 KDM1AO60341 852 aa8.59□□□□□ -1.03
VPS9D1-205ENST00000565452 SRPX2O60687 465 aaPredicted RBP8.59□□□□□ -1.03
VPS9D1-205ENST00000565452 ATE1O95260 518 aa8.59□□□□□ -1.03
VPS9D1-205ENST00000565452 SP1P08047 785 aa8.59□□□□□ -1.03
VPS9D1-205ENST00000565452 CELA2AP08217 269 aa8.59□□□□□ -1.03
VPS9D1-205ENST00000565452 ZFXP17010 805 aaPredicted RBP8.59□□□□□ -1.03
VPS9D1-205ENST00000565452 KDELR1P24390 212 aa8.59□□□□□ -1.03
VPS9D1-205ENST00000565452 CTNNA2P26232 953 aa8.59□□□□□ -1.03
VPS9D1-205ENST00000565452 TNNT3P45378 269 aaPredicted RBP8.59□□□□□ -1.03
VPS9D1-205ENST00000565452 ARSEP51690 589 aa8.59□□□□□ -1.03
VPS9D1-205ENST00000565452 EEF1A2Q05639 463 aaKnown RBP8.59□□□□□ -1.03
VPS9D1-205ENST00000565452 RPA4Q13156 261 aa8.59□□□□□ -1.03
VPS9D1-205ENST00000565452 TUBA3CQ13748 450 aa8.59□□□□□ -1.03
VPS9D1-205ENST00000565452 BOP1Q14137 746 aaKnown RBP8.59□□□□□ -1.03
VPS9D1-205ENST00000565452 OR1C1Q15619 314 aa8.59□□□□□ -1.03
VPS9D1-205ENST00000565452 MEP1AQ16819 746 aa8.59□□□□□ -1.03
VPS9D1-205ENST00000565452 ACER2Q5QJU3 275 aa8.59□□□□□ -1.03
VPS9D1-205ENST00000565452 FBXW10Q5XX13 1052 aa8.59□□□□□ -1.03
VPS9D1-205ENST00000565452 SPINK14Q6IE38 97 aa8.59□□□□□ -1.03
VPS9D1-205ENST00000565452 SLC25A25Q6KCM7 469 aa8.59□□□□□ -1.03
VPS9D1-205ENST00000565452 TUBA3EQ6PEY2 450 aa8.59□□□□□ -1.03
VPS9D1-205ENST00000565452 BZW1Q7L1Q6 419 aaKnown RBP8.59□□□□□ -1.03
VPS9D1-205ENST00000565452 PEX26Q7Z412 305 aa8.59□□□□□ -1.03
VPS9D1-205ENST00000565452 FGD2Q7Z6J4 655 aa8.59□□□□□ -1.03
VPS9D1-205ENST00000565452 CD163Q86VB7 1156 aa8.59□□□□□ -1.03
VPS9D1-205ENST00000565452 LAPTM4BQ86VI4 370 aa8.59□□□□□ -1.03
VPS9D1-205ENST00000565452 KATNAL2Q8IYT4 538 aa8.59□□□□□ -1.03
VPS9D1-205ENST00000565452 MARVELD2Q8N4S9 558 aa8.59□□□□□ -1.03
VPS9D1-205ENST00000565452 METTL27Q8N6F8 245 aaPredicted RBP8.59□□□□□ -1.03
VPS9D1-205ENST00000565452 UBL4BQ8N7F7 174 aa8.59□□□□□ -1.03
VPS9D1-205ENST00000565452 CNTD1Q8N815 330 aa8.59□□□□□ -1.03
VPS9D1-205ENST00000565452 LRRC57Q8N9N7 239 aa8.59□□□□□ -1.03
VPS9D1-205ENST00000565452 MDS2Q8NDY4 140 aa8.59□□□□□ -1.03
VPS9D1-205ENST00000565452 OR10Q1Q8NGQ4 319 aa8.59□□□□□ -1.03
VPS9D1-205ENST00000565452 TMEM158Q8WZ71 300 aa8.59□□□□□ -1.03
VPS9D1-205ENST00000565452 IMP4Q96G21 291 aaKnown RBP8.59□□□□□ -1.03
VPS9D1-205ENST00000565452 SCMH1Q96GD3 660 aa8.59□□□□□ -1.03
VPS9D1-205ENST00000565452 OLFM1Q99784 485 aa8.59□□□□□ -1.03
VPS9D1-205ENST00000565452 ZNF670Q9BS34 389 aa8.59□□□□□ -1.03
VPS9D1-205ENST00000565452 HGH1Q9BTY7 390 aa8.59□□□□□ -1.03
VPS9D1-205ENST00000565452 TUBB6Q9BUF5 446 aa8.59□□□□□ -1.03
VPS9D1-205ENST00000565452 BDH2Q9BUT1 245 aa8.59□□□□□ -1.03
VPS9D1-205ENST00000565452 YIPF2Q9BWQ6 316 aa8.59□□□□□ -1.03
VPS9D1-205ENST00000565452 MAK16Q9BXY0 300 aaKnown RBP8.59□□□□□ -1.03
VPS9D1-205ENST00000565452 SLC25A51Q9H1U9 297 aa8.59□□□□□ -1.03
VPS9D1-205ENST00000565452 OR52A5Q9H2C5 316 aa8.59□□□□□ -1.03
VPS9D1-205ENST00000565452 KCNF1Q9H3M0 494 aa8.59□□□□□ -1.03
VPS9D1-205ENST00000565452 INTS7Q9NVH2 962 aaKnown RBP8.59□□□□□ -1.03
VPS9D1-205ENST00000565452 SMOXQ9NWM0 555 aa8.59□□□□□ -1.03
VPS9D1-205ENST00000565452 SPHK1Q9NYA1 384 aa8.59□□□□□ -1.03
VPS9D1-205ENST00000565452 ADAM21Q9UKJ8 722 aa8.59□□□□□ -1.03
VPS9D1-205ENST00000565452 CDC14AQ9UNH5 594 aa8.59□□□□□ -1.03
VPS9D1-205ENST00000565452 ICKQ9UPZ9 632 aa8.59□□□□□ -1.03
VPS9D1-205ENST00000565452 SPO11Q9Y5K1 396 aa8.59□□□□□ -1.03
VPS9D1-205ENST00000565452 A0A1B0GTH9 108 aa8.58□□□□□ -1.04
VPS9D1-205ENST00000565452 MACROD2A1Z1Q3 448 aa8.58□□□□□ -1.04
VPS9D1-205ENST00000565452 HYKKA2RU49 373 aa8.58□□□□□ -1.04
VPS9D1-205ENST00000565452 GRID2IPA4D2P6 1211 aa8.58□□□□□ -1.04
VPS9D1-205ENST00000565452 FITM1A5D6W6 292 aa8.58□□□□□ -1.04
VPS9D1-205ENST00000565452 A6NNC1 897 aa8.58□□□□□ -1.04
VPS9D1-205ENST00000565452 KCNK1O00180 336 aa8.58□□□□□ -1.04
VPS9D1-205ENST00000565452 MFSD11O43934 449 aa8.58□□□□□ -1.04
VPS9D1-205ENST00000565452 ZNF24P17028 368 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms