RNA–Protein interactions for RNA: ENST00000564846.1

CLN6-205, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 1,762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-205ENST00000564846 KIAA0040Q15053 153 aa18.92■□□□□ 0.62
CLN6-205ENST00000564846 VPS26BQ4G0F5 336 aa18.92■□□□□ 0.62
CLN6-205ENST00000564846 PAGE2BQ5JRK9 111 aa18.92■□□□□ 0.62
CLN6-205ENST00000564846 PRAMEF14Q5SWL7 426 aa18.92■□□□□ 0.62
CLN6-205ENST00000564846 PRAMEF13Q5VWM6 474 aa18.92■□□□□ 0.62
CLN6-205ENST00000564846 ATG9BQ674R7 924 aa18.92■□□□□ 0.62
CLN6-205ENST00000564846 SLC5A11Q8WWX8 675 aa18.92■□□□□ 0.62
CLN6-205ENST00000564846 SPDL1Q96EA4 605 aa18.92■□□□□ 0.62
CLN6-205ENST00000564846 PDXPQ96GD0 296 aa18.92■□□□□ 0.62
CLN6-205ENST00000564846 TEX37Q96LM6 180 aa18.92■□□□□ 0.62
CLN6-205ENST00000564846 IL17FQ96PD4 163 aa18.92■□□□□ 0.62
CLN6-205ENST00000564846 HHIPQ96QV1 700 aa18.92■□□□□ 0.62
CLN6-205ENST00000564846 SLC52A3Q9NQ40 469 aa18.92■□□□□ 0.62
CLN6-205ENST00000564846 C2orf42Q9NWW7 574 aa18.92■□□□□ 0.62
CLN6-205ENST00000564846 PLAGL1Q9UM63 463 aa18.92■□□□□ 0.62
CLN6-205ENST00000564846 PRUNE2Q8WUY3 3088 aa18.92■□□□□ 0.62
CLN6-205ENST00000564846 PDZK1P1A8MUH7 402 aa18.91■□□□□ 0.62
CLN6-205ENST00000564846 ENTPD5O75356 428 aa18.91■□□□□ 0.62
CLN6-205ENST00000564846 C1GALT1C1LP0DN25 315 aa18.91■□□□□ 0.62
CLN6-205ENST00000564846 ACPPP15309 386 aa18.91■□□□□ 0.62
CLN6-205ENST00000564846 JAK1P23458 1154 aa18.91■□□□□ 0.62
CLN6-205ENST00000564846 HNRNPH1P31943 449 aaKnown RBP18.91■□□□□ 0.62
CLN6-205ENST00000564846 THEMIS2Q5TEJ8 643 aa18.91■□□□□ 0.62
CLN6-205ENST00000564846 MED27Q6P2C8 311 aa18.91■□□□□ 0.62
CLN6-205ENST00000564846 SUSD1Q6UWL2 747 aa18.91■□□□□ 0.62
CLN6-205ENST00000564846 LPCAT2Q7L5N7 544 aa18.91■□□□□ 0.62
CLN6-205ENST00000564846 PACS2Q86VP3 889 aa18.91■□□□□ 0.62
CLN6-205ENST00000564846 FAM9CQ8IZT9 166 aa18.91■□□□□ 0.62
CLN6-205ENST00000564846 WDR60Q8WVS4 1066 aa18.91■□□□□ 0.62
CLN6-205ENST00000564846 CDRT15Q96T59 188 aa18.91■□□□□ 0.62
CLN6-205ENST00000564846 MENTQ9BUN1 341 aa18.91■□□□□ 0.62
CLN6-205ENST00000564846 PCBD2Q9H0N5 130 aa18.91■□□□□ 0.62
CLN6-205ENST00000564846 MVB12BQ9H7P6 319 aa18.91■□□□□ 0.62
CLN6-205ENST00000564846 BRF2Q9HAW0 419 aa18.91■□□□□ 0.62
CLN6-205ENST00000564846 IMP3Q9NV31 184 aaKnown RBP18.91■□□□□ 0.62
CLN6-205ENST00000564846 CCDC154A6NI56 674 aa18.91■□□□□ 0.62
CLN6-205ENST00000564846 ANKRD28O15084 1053 aa18.91■□□□□ 0.62
CLN6-205ENST00000564846 CFLARO15519 480 aa18.91■□□□□ 0.62
CLN6-205ENST00000564846 VARSP26640 1264 aaKnown RBP18.91■□□□□ 0.62
CLN6-205ENST00000564846 MAPK1P28482 360 aa18.91■□□□□ 0.62
CLN6-205ENST00000564846 ZFP36L2P47974 494 aaKnown RBP18.91■□□□□ 0.62
CLN6-205ENST00000564846 PSME3P61289 254 aa18.91■□□□□ 0.62
CLN6-205ENST00000564846 LAPTM5Q13571 262 aa18.91■□□□□ 0.62
CLN6-205ENST00000564846 CLCA4Q14CN2 919 aa18.91■□□□□ 0.62
CLN6-205ENST00000564846 TPRG1LQ5T0D9 272 aa18.91■□□□□ 0.62
CLN6-205ENST00000564846 C1orf146Q5VVC0 180 aa18.91■□□□□ 0.62
CLN6-205ENST00000564846 DUS1LQ6P1R4 473 aaKnown RBP18.91■□□□□ 0.62
CLN6-205ENST00000564846 Q6ZSR6 202 aa18.91■□□□□ 0.62
CLN6-205ENST00000564846 ABI3BPQ7Z7G0 1075 aa18.91■□□□□ 0.62
CLN6-205ENST00000564846 SMPDL3AQ92484 453 aa18.91■□□□□ 0.62
CLN6-205ENST00000564846 BIRC7Q96CA5 298 aa18.91■□□□□ 0.62
CLN6-205ENST00000564846 METTL2AQ96IZ6 378 aaKnown RBP18.91■□□□□ 0.62
CLN6-205ENST00000564846 GPR174Q9BXC1 333 aa18.91■□□□□ 0.62
CLN6-205ENST00000564846 FOXQ1Q9C009 403 aa18.91■□□□□ 0.62
CLN6-205ENST00000564846 ACTL8Q9H568 366 aa18.91■□□□□ 0.62
CLN6-205ENST00000564846 SPATA6Q9NWH7 488 aaPredicted RBP18.91■□□□□ 0.62
CLN6-205ENST00000564846 CROTQ9UKG9 612 aa18.91■□□□□ 0.62
CLN6-205ENST00000564846 HEBP2Q9Y5Z4 205 aa18.91■□□□□ 0.62
CLN6-205ENST00000564846 PDE5AO76074 875 aa18.9■□□□□ 0.62
CLN6-205ENST00000564846 LMNAP02545 664 aaKnown RBP18.9■□□□□ 0.62
CLN6-205ENST00000564846 PRPS2P11908 318 aa18.9■□□□□ 0.62
CLN6-205ENST00000564846 KRT33BQ14525 404 aa18.9■□□□□ 0.62
CLN6-205ENST00000564846 HIST2H2ACQ16777 129 aaPredicted RBP18.9■□□□□ 0.62
CLN6-205ENST00000564846 CATSPEREQ5SY80 951 aa18.9■□□□□ 0.62
CLN6-205ENST00000564846 HIST2H2AA3Q6FI13 130 aa18.9■□□□□ 0.62
CLN6-205ENST00000564846 C8orf82Q6P1X6 216 aaPredicted RBP18.9■□□□□ 0.62
CLN6-205ENST00000564846 NXPE4Q6UWF7 544 aa18.9■□□□□ 0.62
CLN6-205ENST00000564846 WASH2PQ6VEQ5 465 aa18.9■□□□□ 0.62
CLN6-205ENST00000564846 RETREG3Q86VR2 466 aa18.9■□□□□ 0.62
CLN6-205ENST00000564846 SIX5Q8N196 739 aa18.9■□□□□ 0.62
CLN6-205ENST00000564846 GLB1L3Q8NCI6 653 aaPredicted RBP18.9■□□□□ 0.62
CLN6-205ENST00000564846 OR7G3Q8NG95 312 aa18.9■□□□□ 0.62
CLN6-205ENST00000564846 RAB11FIP5Q9BXF6 653 aa18.9■□□□□ 0.62
CLN6-205ENST00000564846 WASH6PQ9NQA3 447 aa18.9■□□□□ 0.62
CLN6-205ENST00000564846 GID8Q9NWU2 228 aa18.9■□□□□ 0.62
CLN6-205ENST00000564846 PCDHGA7Q9Y5G6 932 aa18.9■□□□□ 0.62
CLN6-205ENST00000564846 C9JVG2 144 aa18.89■□□□□ 0.61
CLN6-205ENST00000564846 EEDO75530 441 aaKnown RBP18.89■□□□□ 0.61
CLN6-205ENST00000564846 IL12AP29459 219 aa18.89■□□□□ 0.61
CLN6-205ENST00000564846 ACTR3P61158 418 aa18.89■□□□□ 0.61
CLN6-205ENST00000564846 USP39Q53GS9 565 aaKnown RBP18.89■□□□□ 0.61
CLN6-205ENST00000564846 PIGGQ5H8A4 983 aa18.89■□□□□ 0.61
CLN6-205ENST00000564846 ABRAXAS1Q6UWZ7 409 aa18.89■□□□□ 0.61
CLN6-205ENST00000564846 RIPOR1Q6ZS17 1223 aa18.89■□□□□ 0.61
CLN6-205ENST00000564846 HPS6Q86YV9 775 aa18.89■□□□□ 0.61
CLN6-205ENST00000564846 LIX1Q8N485 282 aa18.89■□□□□ 0.61
CLN6-205ENST00000564846 LMNTD1Q8N9Z9 388 aa18.89■□□□□ 0.61
CLN6-205ENST00000564846 UBE2E3Q969T4 207 aa18.89■□□□□ 0.61
CLN6-205ENST00000564846 TSACCQ96A04 125 aaPredicted RBP18.89■□□□□ 0.61
CLN6-205ENST00000564846 CAMK1GQ96NX5 476 aa18.89■□□□□ 0.61
CLN6-205ENST00000564846 ZBTB18Q99592 522 aa18.89■□□□□ 0.61
CLN6-205ENST00000564846 HOPXQ9BPY8 73 aaPredicted RBP18.89■□□□□ 0.61
CLN6-205ENST00000564846 PRDM8Q9NQV8 689 aa18.89■□□□□ 0.61
CLN6-205ENST00000564846 MAP10Q9P2G4 905 aa18.89■□□□□ 0.61
CLN6-205ENST00000564846 VPS29Q9UBQ0 182 aa18.89■□□□□ 0.61
CLN6-205ENST00000564846 LEF1Q9UJU2 399 aaPredicted RBP18.89■□□□□ 0.61
CLN6-205ENST00000564846 SH2B3Q9UQQ2 575 aa18.89■□□□□ 0.61
CLN6-205ENST00000564846 KDM1AO60341 852 aa18.88■□□□□ 0.61
CLN6-205ENST00000564846 BCKDHAP12694 445 aa18.88■□□□□ 0.61
CLN6-205ENST00000564846 DPP6P42658 865 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms