RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 TEX26Q8N6G2 289 aa19.94■□□□□ 0.78
MAP1LC3B-206ENST00000564844 IL17RDQ8NFM7 739 aa19.94■□□□□ 0.78
MAP1LC3B-206ENST00000564844 MMP28Q9H239 520 aa19.94■□□□□ 0.78
MAP1LC3B-206ENST00000564844 CCSER2Q9H7U1 834 aa19.94■□□□□ 0.78
MAP1LC3B-206ENST00000564844 CCL27Q9Y4X3 112 aa19.94■□□□□ 0.78
MAP1LC3B-206ENST00000564844 C17orf102A2RUQ5 167 aa19.94■□□□□ 0.78
MAP1LC3B-206ENST00000564844 H3BM21 787 aa19.94■□□□□ 0.78
MAP1LC3B-206ENST00000564844 M0QZ92 97 aa19.94■□□□□ 0.78
MAP1LC3B-206ENST00000564844 MED26O95402 600 aa19.94■□□□□ 0.78
MAP1LC3B-206ENST00000564844 FABP3P05413 133 aa19.94■□□□□ 0.78
MAP1LC3B-206ENST00000564844 ITGAMP11215 1152 aa19.94■□□□□ 0.78
MAP1LC3B-206ENST00000564844 JUNDP17535 347 aa19.94■□□□□ 0.78
MAP1LC3B-206ENST00000564844 LPOP22079 712 aaPredicted RBP19.94■□□□□ 0.78
MAP1LC3B-206ENST00000564844 PPP3CCP48454 512 aa19.94■□□□□ 0.78
MAP1LC3B-206ENST00000564844 CDC42EP1Q00587 391 aa19.94■□□□□ 0.78
MAP1LC3B-206ENST00000564844 SMARCB1Q12824 385 aa19.94■□□□□ 0.78
MAP1LC3B-206ENST00000564844 CDC20Q12834 499 aa19.94■□□□□ 0.78
MAP1LC3B-206ENST00000564844 SMUG1Q53HV7 270 aa19.94■□□□□ 0.78
MAP1LC3B-206ENST00000564844 ARMCX4Q5H9R4 360 aa19.94■□□□□ 0.78
MAP1LC3B-206ENST00000564844 CAPN13Q6MZZ7 669 aaPredicted RBP19.94■□□□□ 0.78
MAP1LC3B-206ENST00000564844 ZNF683Q8IZ20 524 aa19.94■□□□□ 0.78
MAP1LC3B-206ENST00000564844 CLIP3Q96DZ5 547 aa19.94■□□□□ 0.78
MAP1LC3B-206ENST00000564844 DHRS1Q96LJ7 313 aa19.94■□□□□ 0.78
MAP1LC3B-206ENST00000564844 CITED4Q96RK1 184 aa19.94■□□□□ 0.78
MAP1LC3B-206ENST00000564844 REEP1Q9H902 201 aa19.94■□□□□ 0.78
MAP1LC3B-206ENST00000564844 OGDHLQ9ULD0 1010 aa19.94■□□□□ 0.78
MAP1LC3B-206ENST00000564844 NOD1Q9Y239 953 aa19.94■□□□□ 0.78
MAP1LC3B-206ENST00000564844 KLK8O60259 260 aa19.93■□□□□ 0.78
MAP1LC3B-206ENST00000564844 DNAJB5O75953 348 aa19.93■□□□□ 0.78
MAP1LC3B-206ENST00000564844 PRLP01236 227 aa19.93■□□□□ 0.78
MAP1LC3B-206ENST00000564844 CAMK2BQ13554 666 aa19.93■□□□□ 0.78
MAP1LC3B-206ENST00000564844 DDX39BQ13838 428 aaKnown RBP19.93■□□□□ 0.78
MAP1LC3B-206ENST00000564844 ZNF181Q2M3W8 571 aa19.93■□□□□ 0.78
MAP1LC3B-206ENST00000564844 VANGL1Q8TAA9 524 aaPredicted RBP19.93■□□□□ 0.78
MAP1LC3B-206ENST00000564844 SH3GL1Q99961 368 aa19.93■□□□□ 0.78
MAP1LC3B-206ENST00000564844 RLIMQ9NVW2 624 aa19.93■□□□□ 0.78
MAP1LC3B-206ENST00000564844 FNDC1Q4ZHG4 1894 aaPredicted RBP19.93■□□□□ 0.78
MAP1LC3B-206ENST00000564844 GFRA2O00451 464 aa19.93■□□□□ 0.78
MAP1LC3B-206ENST00000564844 RETP07949 1114 aa19.93■□□□□ 0.78
MAP1LC3B-206ENST00000564844 HOXB8P17481 243 aaPredicted RBP19.93■□□□□ 0.78
MAP1LC3B-206ENST00000564844 IRF3Q14653 427 aa19.93■□□□□ 0.78
MAP1LC3B-206ENST00000564844 TMEM132CQ8N3T6 1108 aa19.93■□□□□ 0.78
MAP1LC3B-206ENST00000564844 STX19Q8N4C7 294 aa19.93■□□□□ 0.78
MAP1LC3B-206ENST00000564844 ZNF675Q8TD23 568 aa19.93■□□□□ 0.78
MAP1LC3B-206ENST00000564844 ZNF566Q969W8 418 aa19.93■□□□□ 0.78
MAP1LC3B-206ENST00000564844 TIGARQ9NQ88 270 aa19.93■□□□□ 0.78
MAP1LC3B-206ENST00000564844 SERHLQ9NQF3 203 aa19.93■□□□□ 0.78
MAP1LC3B-206ENST00000564844 NDRG4Q9ULP0 352 aaKnown RBP19.93■□□□□ 0.78
MAP1LC3B-206ENST00000564844 ZSWIM8A7E2V4 1837 aa19.93■□□□□ 0.78
MAP1LC3B-206ENST00000564844 MYADML2A6NDP7 307 aa19.92■□□□□ 0.78
MAP1LC3B-206ENST00000564844 PRAMEF11O60813 436 aa19.92■□□□□ 0.78
MAP1LC3B-206ENST00000564844 IL6P05231 212 aa19.92■□□□□ 0.78
MAP1LC3B-206ENST00000564844 ZFP69Q49AA0 526 aa19.92■□□□□ 0.78
MAP1LC3B-206ENST00000564844 CLECL1Q8IZS7 167 aa19.92■□□□□ 0.78
MAP1LC3B-206ENST00000564844 ELMOD1Q8N336 334 aa19.92■□□□□ 0.78
MAP1LC3B-206ENST00000564844 SPPL2AQ8TCT8 520 aa19.92■□□□□ 0.78
MAP1LC3B-206ENST00000564844 SLC39A13Q96H72 371 aa19.92■□□□□ 0.78
MAP1LC3B-206ENST00000564844 OR5M11Q96RB7 305 aa19.92■□□□□ 0.78
MAP1LC3B-206ENST00000564844 PANX1Q96RD7 426 aa19.92■□□□□ 0.78
MAP1LC3B-206ENST00000564844 CPPED1Q9BRF8 314 aaPredicted RBP19.92■□□□□ 0.78
MAP1LC3B-206ENST00000564844 PPT2Q9UMR5 302 aa19.92■□□□□ 0.78
MAP1LC3B-206ENST00000564844 PCDHB9Q9Y5E1 797 aa19.92■□□□□ 0.78
MAP1LC3B-206ENST00000564844 RAI2Q9Y5P3 530 aa19.92■□□□□ 0.78
MAP1LC3B-206ENST00000564844 PRSS21Q9Y6M0 314 aa19.92■□□□□ 0.78
MAP1LC3B-206ENST00000564844 PCM1Q15154 2024 aa19.92■□□□□ 0.78
MAP1LC3B-206ENST00000564844 HAT1O14929 419 aa19.92■□□□□ 0.78
MAP1LC3B-206ENST00000564844 CSF2P04141 144 aa19.92■□□□□ 0.78
MAP1LC3B-206ENST00000564844 ENGP17813 658 aa19.92■□□□□ 0.78
MAP1LC3B-206ENST00000564844 RPS14P62263 151 aaKnown RBP19.92■□□□□ 0.78
MAP1LC3B-206ENST00000564844 MXD1Q05195 221 aa19.92■□□□□ 0.78
MAP1LC3B-206ENST00000564844 NDUFA5Q16718 116 aa19.92■□□□□ 0.78
MAP1LC3B-206ENST00000564844 CCDC58Q4VC31 144 aa19.92■□□□□ 0.78
MAP1LC3B-206ENST00000564844 AGAP6Q5VW22 663 aa19.92■□□□□ 0.78
MAP1LC3B-206ENST00000564844 SELENOMQ8WWX9 145 aa19.92■□□□□ 0.78
MAP1LC3B-206ENST00000564844 AGAP4Q96P64 663 aa19.92■□□□□ 0.78
MAP1LC3B-206ENST00000564844 CLMPQ9H6B4 373 aa19.92■□□□□ 0.78
MAP1LC3B-206ENST00000564844 FLRT1Q9NZU1 646 aa19.92■□□□□ 0.78
MAP1LC3B-206ENST00000564844 ARIH1Q9Y4X5 557 aaPredicted RBP19.92■□□□□ 0.78
MAP1LC3B-206ENST00000564844 PCDHGA6Q9Y5G7 932 aa19.92■□□□□ 0.78
MAP1LC3B-206ENST00000564844 SLC25A14O95258 325 aaPredicted RBP19.91■□□□□ 0.78
MAP1LC3B-206ENST00000564844 FHP07954 510 aa19.91■□□□□ 0.78
MAP1LC3B-206ENST00000564844 DNAJA1P31689 397 aaKnown RBP19.91■□□□□ 0.78
MAP1LC3B-206ENST00000564844 USP39Q53GS9 565 aaKnown RBP19.91■□□□□ 0.78
MAP1LC3B-206ENST00000564844 ARMC12Q5T9G4 340 aa19.91■□□□□ 0.78
MAP1LC3B-206ENST00000564844 NADSYN1Q6IA69 706 aa19.91■□□□□ 0.78
MAP1LC3B-206ENST00000564844 TRIM48Q8IWZ4 208 aa19.91■□□□□ 0.78
MAP1LC3B-206ENST00000564844 FBXO32Q969P5 355 aa19.91■□□□□ 0.78
MAP1LC3B-206ENST00000564844 TP53INP1Q96A56 240 aa19.91■□□□□ 0.78
MAP1LC3B-206ENST00000564844 TRNT1Q96Q11 434 aaKnown RBP19.91■□□□□ 0.78
MAP1LC3B-206ENST00000564844 FYTTD1Q96QD9 318 aaKnown RBP19.91■□□□□ 0.78
MAP1LC3B-206ENST00000564844 C1QTNF3Q9BXJ4 246 aa19.91■□□□□ 0.78
MAP1LC3B-206ENST00000564844 IL1RAPQ9NPH3 570 aa19.91■□□□□ 0.78
MAP1LC3B-206ENST00000564844 WBP11Q9Y2W2 641 aaKnown RBP19.91■□□□□ 0.78
MAP1LC3B-206ENST00000564844 PPP2R3BQ9Y5P8 575 aa19.91■□□□□ 0.78
MAP1LC3B-206ENST00000564844 RALGAPA2Q2PPJ7 1873 aa19.91■□□□□ 0.78
MAP1LC3B-206ENST00000564844 KIAA0513O60268 411 aa19.91■□□□□ 0.78
MAP1LC3B-206ENST00000564844 PDYNP01213 254 aa19.91■□□□□ 0.78
MAP1LC3B-206ENST00000564844 POU1F1P28069 291 aa19.91■□□□□ 0.78
MAP1LC3B-206ENST00000564844 RRM2P31350 389 aa19.91■□□□□ 0.78
MAP1LC3B-206ENST00000564844 TTPAP49638 278 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms