RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 ZDHHC21Q8IVQ6 265 aa15.85■□□□□ 0.13
LINC00554-201ENST00000564841 ENTHD1Q8IYW4 607 aa15.85■□□□□ 0.13
LINC00554-201ENST00000564841 DPP10Q8N608 796 aa15.85■□□□□ 0.13
LINC00554-201ENST00000564841 PCNPQ8WW12 178 aaKnown RBP15.85■□□□□ 0.13
LINC00554-201ENST00000564841 RASSF5Q8WWW0 418 aa15.85■□□□□ 0.13
LINC00554-201ENST00000564841 TRIM63Q969Q1 353 aa15.85■□□□□ 0.13
LINC00554-201ENST00000564841 FCRL2Q96LA5 508 aaPredicted RBP15.85■□□□□ 0.13
LINC00554-201ENST00000564841 LYVE1Q9Y5Y7 322 aa15.85■□□□□ 0.13
LINC00554-201ENST00000564841 MN1Q10571 1320 aaPredicted RBP15.85■□□□□ 0.13
LINC00554-201ENST00000564841 A8MX80 341 aa15.85■□□□□ 0.13
LINC00554-201ENST00000564841 H3BM21 787 aa15.85■□□□□ 0.13
LINC00554-201ENST00000564841 TSC22D2O75157 780 aa15.85■□□□□ 0.13
LINC00554-201ENST00000564841 ITGAMP11215 1152 aa15.85■□□□□ 0.13
LINC00554-201ENST00000564841 UGT2B10P36537 528 aa15.85■□□□□ 0.13
LINC00554-201ENST00000564841 CD86P42081 329 aa15.85■□□□□ 0.13
LINC00554-201ENST00000564841 TUSC3Q13454 348 aa15.85■□□□□ 0.13
LINC00554-201ENST00000564841 NR6A1Q15406 480 aa15.85■□□□□ 0.13
LINC00554-201ENST00000564841 CCDC190Q86UF4 302 aa15.85■□□□□ 0.13
LINC00554-201ENST00000564841 ESX1Q8N693 406 aa15.85■□□□□ 0.13
LINC00554-201ENST00000564841 ATG16L2Q8NAA4 619 aa15.85■□□□□ 0.13
LINC00554-201ENST00000564841 GRPEL2Q8TAA5 225 aa15.85■□□□□ 0.13
LINC00554-201ENST00000564841 GPR151Q8TDV0 419 aa15.85■□□□□ 0.13
LINC00554-201ENST00000564841 SMARCD1Q96GM5 515 aa15.85■□□□□ 0.13
LINC00554-201ENST00000564841 FAM193BQ96PV7 902 aaPredicted RBP15.85■□□□□ 0.13
LINC00554-201ENST00000564841 NXF2Q9GZY0 626 aaKnown RBP15.85■□□□□ 0.13
LINC00554-201ENST00000564841 ABCG8Q9H221 673 aa15.85■□□□□ 0.13
LINC00554-201ENST00000564841 TM9SF3Q9HD45 589 aa15.85■□□□□ 0.13
LINC00554-201ENST00000564841 DCAF13Q9NV06 445 aaKnown RBP15.85■□□□□ 0.13
LINC00554-201ENST00000564841 CDH23Q9H251 3354 aa15.85■□□□□ 0.13
LINC00554-201ENST00000564841 ZNF236Q9UL36 1845 aa15.85■□□□□ 0.13
LINC00554-201ENST00000564841 CCR1P32246 355 aa15.84■□□□□ 0.13
LINC00554-201ENST00000564841 GRK4P32298 578 aa15.84■□□□□ 0.13
LINC00554-201ENST00000564841 UGT2B15P54855 530 aa15.84■□□□□ 0.13
LINC00554-201ENST00000564841 SPANXN4Q5MJ08 99 aa15.84■□□□□ 0.13
LINC00554-201ENST00000564841 FAM171A1Q5VUB5 890 aa15.84■□□□□ 0.13
LINC00554-201ENST00000564841 DPY19L3Q6ZPD9 716 aa15.84■□□□□ 0.13
LINC00554-201ENST00000564841 BHLHA9Q7RTU4 235 aa15.84■□□□□ 0.13
LINC00554-201ENST00000564841 SLC46A3Q7Z3Q1 461 aa15.84■□□□□ 0.13
LINC00554-201ENST00000564841 VTCN1Q7Z7D3 282 aa15.84■□□□□ 0.13
LINC00554-201ENST00000564841 AMIGO1Q86WK6 493 aa15.84■□□□□ 0.13
LINC00554-201ENST00000564841 COQ8BQ96D53 544 aa15.84■□□□□ 0.13
LINC00554-201ENST00000564841 KCNC2Q96PR1 638 aa15.84■□□□□ 0.13
LINC00554-201ENST00000564841 SLC30A2Q9BRI3 323 aa15.84■□□□□ 0.13
LINC00554-201ENST00000564841 NPAP1Q9NZP6 1156 aa15.84■□□□□ 0.13
LINC00554-201ENST00000564841 ZIM2Q9NZV7 527 aa15.84■□□□□ 0.13
LINC00554-201ENST00000564841 ARL5AQ9Y689 179 aa15.84■□□□□ 0.13
LINC00554-201ENST00000564841 A0A1W2PQ09 198 aa15.84■□□□□ 0.13
LINC00554-201ENST00000564841 HMX3A6NHT5 357 aa15.84■□□□□ 0.13
LINC00554-201ENST00000564841 FAM25AB3EWG3 89 aa15.84■□□□□ 0.13
LINC00554-201ENST00000564841 FAM25CB3EWG5 89 aa15.84■□□□□ 0.13
LINC00554-201ENST00000564841 FAM25GB3EWG6 89 aa15.84■□□□□ 0.13
LINC00554-201ENST00000564841 TBX18O95935 607 aa15.84■□□□□ 0.13
LINC00554-201ENST00000564841 RPLP0P05388 317 aaKnown RBP15.84■□□□□ 0.13
LINC00554-201ENST00000564841 PIK3CBP42338 1070 aa15.84■□□□□ 0.13
LINC00554-201ENST00000564841 MAGEA11P43364 429 aa15.84■□□□□ 0.13
LINC00554-201ENST00000564841 GEMP55040 296 aa15.84■□□□□ 0.13
LINC00554-201ENST00000564841 ERVPABLB-1P60509 514 aa15.84■□□□□ 0.13
LINC00554-201ENST00000564841 DSC2Q02487 901 aa15.84■□□□□ 0.13
LINC00554-201ENST00000564841 ARMCX4Q5H9R4 360 aa15.84■□□□□ 0.13
LINC00554-201ENST00000564841 LETMD1Q6P1Q0 360 aa15.84■□□□□ 0.13
LINC00554-201ENST00000564841 ABI3BPQ7Z7G0 1075 aa15.84■□□□□ 0.13
LINC00554-201ENST00000564841 HIPK1Q86Z02 1210 aa15.84■□□□□ 0.13
LINC00554-201ENST00000564841 OR13C4Q8NGS5 318 aa15.84■□□□□ 0.13
LINC00554-201ENST00000564841 VANGL1Q8TAA9 524 aaPredicted RBP15.84■□□□□ 0.13
LINC00554-201ENST00000564841 DEDD2Q8WXF8 326 aa15.84■□□□□ 0.13
LINC00554-201ENST00000564841 RAPGEFL1Q9UHV5 662 aa15.84■□□□□ 0.13
LINC00554-201ENST00000564841 ZMYM5Q9UJ78 669 aa15.84■□□□□ 0.13
LINC00554-201ENST00000564841 TMPRSS11EQ9UL52 423 aa15.84■□□□□ 0.13
LINC00554-201ENST00000564841 SLC6A14Q9UN76 642 aa15.84■□□□□ 0.13
LINC00554-201ENST00000564841 PQBP1O60828 265 aaKnown RBP15.84■□□□□ 0.13
LINC00554-201ENST00000564841 CCNYL3P0C7X3 344 aa15.84■□□□□ 0.13
LINC00554-201ENST00000564841 CYP2A6P11509 494 aaPredicted RBP15.84■□□□□ 0.13
LINC00554-201ENST00000564841 MSH3P20585 1137 aa15.84■□□□□ 0.13
LINC00554-201ENST00000564841 FDXRP22570 491 aa15.84■□□□□ 0.13
LINC00554-201ENST00000564841 SCNN1AP37088 669 aa15.84■□□□□ 0.13
LINC00554-201ENST00000564841 SPATA2LQ8IUW3 424 aaPredicted RBP15.84■□□□□ 0.13
LINC00554-201ENST00000564841 TMEM86AQ8N2M4 240 aa15.84■□□□□ 0.13
LINC00554-201ENST00000564841 ZNF675Q8TD23 568 aa15.84■□□□□ 0.13
LINC00554-201ENST00000564841 MCCC1Q96RQ3 725 aaPredicted RBP15.84■□□□□ 0.13
LINC00554-201ENST00000564841 HDHD5Q9BXW7 423 aa15.84■□□□□ 0.13
LINC00554-201ENST00000564841 ANKHQ9HCJ1 492 aa15.84■□□□□ 0.13
LINC00554-201ENST00000564841 NDRG4Q9ULP0 352 aaKnown RBP15.84■□□□□ 0.13
LINC00554-201ENST00000564841 PEX16Q9Y5Y5 336 aa15.84■□□□□ 0.13
LINC00554-201ENST00000564841 A0A1W2PQ45 241 aaPredicted RBP15.83■□□□□ 0.12
LINC00554-201ENST00000564841 A0A1W2PQY0 241 aa15.83■□□□□ 0.12
LINC00554-201ENST00000564841 PER2O15055 1255 aa15.83■□□□□ 0.12
LINC00554-201ENST00000564841 KRT6AP02538 564 aa15.83■□□□□ 0.12
LINC00554-201ENST00000564841 KRT6BP04259 564 aa15.83■□□□□ 0.12
LINC00554-201ENST00000564841 ADRA2AP08913 450 aa15.83■□□□□ 0.12
LINC00554-201ENST00000564841 SSTR4P31391 388 aa15.83■□□□□ 0.12
LINC00554-201ENST00000564841 FAM189BP81408 668 aa15.83■□□□□ 0.12
LINC00554-201ENST00000564841 IL18R1Q13478 541 aa15.83■□□□□ 0.12
LINC00554-201ENST00000564841 AP5B1Q2VPB7 878 aa15.83■□□□□ 0.12
LINC00554-201ENST00000564841 TTC9BQ8N6N2 239 aa15.83■□□□□ 0.12
LINC00554-201ENST00000564841 YIPF7Q8N8F6 280 aa15.83■□□□□ 0.12
LINC00554-201ENST00000564841 SCLYQ96I15 445 aa15.83■□□□□ 0.12
LINC00554-201ENST00000564841 SIGLEC11Q96RL6 698 aa15.83■□□□□ 0.12
LINC00554-201ENST00000564841 APOL4Q9BPW4 351 aa15.83■□□□□ 0.12
LINC00554-201ENST00000564841 SLC7A5P2Q9GIP4 190 aa15.83■□□□□ 0.12
LINC00554-201ENST00000564841 MKLN1Q9UL63 735 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms