RNA–Protein interactions for RNA: ENST00000564172.1

GDE1-203, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene GDE1, Length 2,238 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-203ENST00000564172 LCP2Q13094 533 aa17.2■□□□□ 0.34
GDE1-203ENST00000564172 SP140Q13342 867 aa17.2■□□□□ 0.34
GDE1-203ENST00000564172 UBXN2BQ14CS0 331 aa17.2■□□□□ 0.34
GDE1-203ENST00000564172 SLC9B1Q4ZJI4 515 aa17.2■□□□□ 0.34
GDE1-203ENST00000564172 SULT1C3Q6IMI6 304 aa17.2■□□□□ 0.34
GDE1-203ENST00000564172 SLC51BQ86UW2 128 aa17.2■□□□□ 0.34
GDE1-203ENST00000564172 SLC22A15Q8IZD6 547 aa17.2■□□□□ 0.34
GDE1-203ENST00000564172 PGBD3Q8N328 593 aa17.2■□□□□ 0.34
GDE1-203ENST00000564172 MAFAQ8NHW3 353 aaPredicted RBP17.2■□□□□ 0.34
GDE1-203ENST00000564172 MID1IP1Q9NPA3 183 aa17.2■□□□□ 0.34
GDE1-203ENST00000564172 PHPT1Q9NRX4 125 aaPredicted RBP17.2■□□□□ 0.34
GDE1-203ENST00000564172 USP36Q9P275 1121 aaKnown RBP17.2■□□□□ 0.34
GDE1-203ENST00000564172 PRKAB1Q9Y478 270 aa17.2■□□□□ 0.34
GDE1-203ENST00000564172 PCDHGA11Q9Y5H2 935 aa17.2■□□□□ 0.34
GDE1-203ENST00000564172 KPNA4O00629 521 aaPredicted RBP17.19■□□□□ 0.34
GDE1-203ENST00000564172 JUNP05412 331 aaKnown RBP17.19■□□□□ 0.34
GDE1-203ENST00000564172 FGF4P08620 206 aa17.19■□□□□ 0.34
GDE1-203ENST00000564172 GSTM1P09488 218 aa17.19■□□□□ 0.34
GDE1-203ENST00000564172 RCVRNP35243 200 aa17.19■□□□□ 0.34
GDE1-203ENST00000564172 ARHGAP8P85298 464 aa17.19■□□□□ 0.34
GDE1-203ENST00000564172 ABRQ12979 859 aa17.19■□□□□ 0.34
GDE1-203ENST00000564172 C1orf146Q5VVC0 180 aa17.19■□□□□ 0.34
GDE1-203ENST00000564172 XKR5Q6UX68 686 aa17.19■□□□□ 0.34
GDE1-203ENST00000564172 MBOAT1Q6ZNC8 495 aa17.19■□□□□ 0.34
GDE1-203ENST00000564172 ULK2Q8IYT8 1036 aa17.19■□□□□ 0.34
GDE1-203ENST00000564172 MINDY2Q8NBR6 621 aa17.19■□□□□ 0.34
GDE1-203ENST00000564172 TOR1AIP2Q8NFQ8 470 aa17.19■□□□□ 0.34
GDE1-203ENST00000564172 OR2T34Q8NGX1 318 aa17.19■□□□□ 0.34
GDE1-203ENST00000564172 OR2L2Q8NH16 312 aa17.19■□□□□ 0.34
GDE1-203ENST00000564172 FOXJ1Q92949 421 aa17.19■□□□□ 0.34
GDE1-203ENST00000564172 SDCCAG3Q96C92 435 aa17.19■□□□□ 0.34
GDE1-203ENST00000564172 SHDQ96IW2 340 aa17.19■□□□□ 0.34
GDE1-203ENST00000564172 TRIM54Q9BYV2 358 aa17.19■□□□□ 0.34
GDE1-203ENST00000564172 C1orf21Q9H246 121 aa17.19■□□□□ 0.34
GDE1-203ENST00000564172 FIS1Q9Y3D6 152 aa17.19■□□□□ 0.34
GDE1-203ENST00000564172 A0A1B0GTL3 188 aa17.19■□□□□ 0.34
GDE1-203ENST00000564172 DNAJA2O60884 412 aa17.19■□□□□ 0.34
GDE1-203ENST00000564172 ANXA5P08758 320 aa17.19■□□□□ 0.34
GDE1-203ENST00000564172 HIST1H2AGP0C0S8 130 aaPredicted RBP17.19■□□□□ 0.34
GDE1-203ENST00000564172 FAM58BPP0C7Q3 252 aa17.19■□□□□ 0.34
GDE1-203ENST00000564172 HIST1H2ADP20671 130 aa17.19■□□□□ 0.34
GDE1-203ENST00000564172 HSPA7P48741 367 aa17.19■□□□□ 0.34
GDE1-203ENST00000564172 CDKL1Q00532 357 aa17.19■□□□□ 0.34
GDE1-203ENST00000564172 CDONQ4KMG0 1287 aa17.19■□□□□ 0.34
GDE1-203ENST00000564172 CDKL4Q5MAI5 379 aa17.19■□□□□ 0.34
GDE1-203ENST00000564172 FAR2Q96K12 515 aa17.19■□□□□ 0.34
GDE1-203ENST00000564172 HIST1H2AHQ96KK5 128 aa17.19■□□□□ 0.34
GDE1-203ENST00000564172 PPP1R36Q96LQ0 422 aa17.19■□□□□ 0.34
GDE1-203ENST00000564172 LRGUKQ96M69 825 aa17.19■□□□□ 0.34
GDE1-203ENST00000564172 HIST1H2AJQ99878 128 aa17.19■□□□□ 0.34
GDE1-203ENST00000564172 H2AFJQ9BTM1 129 aa17.19■□□□□ 0.34
GDE1-203ENST00000564172 FOXQ1Q9C009 403 aa17.19■□□□□ 0.34
GDE1-203ENST00000564172 NMUR2Q9GZQ4 415 aa17.19■□□□□ 0.34
GDE1-203ENST00000564172 SGK2Q9HBY8 427 aa17.19■□□□□ 0.34
GDE1-203ENST00000564172 ARL15Q9NXU5 204 aa17.19■□□□□ 0.34
GDE1-203ENST00000564172 SLC7A8Q9UHI5 535 aa17.19■□□□□ 0.34
GDE1-203ENST00000564172 ERGIC3Q9Y282 383 aa17.19■□□□□ 0.34
GDE1-203ENST00000564172 MGAT4DA6NG13 374 aa17.18■□□□□ 0.34
GDE1-203ENST00000564172 LRRC72A6NJI9 287 aa17.18■□□□□ 0.34
GDE1-203ENST00000564172 FAM170BA6NMN3 283 aa17.18■□□□□ 0.34
GDE1-203ENST00000564172 H3BM21 787 aa17.18■□□□□ 0.34
GDE1-203ENST00000564172 FCHO1O14526 889 aa17.18■□□□□ 0.34
GDE1-203ENST00000564172 GUCY1B2O75343 617 aa17.18■□□□□ 0.34
GDE1-203ENST00000564172 PSIP1O75475 530 aaKnown RBP17.18■□□□□ 0.34
GDE1-203ENST00000564172 MLYCDO95822 493 aa17.18■□□□□ 0.34
GDE1-203ENST00000564172 ATP6V1B1P15313 513 aa17.18■□□□□ 0.34
GDE1-203ENST00000564172 CYP2A7P20853 494 aa17.18■□□□□ 0.34
GDE1-203ENST00000564172 MYBPC1Q00872 1141 aa17.18■□□□□ 0.34
GDE1-203ENST00000564172 MOGQ16653 247 aa17.18■□□□□ 0.34
GDE1-203ENST00000564172 OGFRL1Q5TC84 451 aaPredicted RBP17.18■□□□□ 0.34
GDE1-203ENST00000564172 CLEC6AQ6EIG7 209 aa17.18■□□□□ 0.34
GDE1-203ENST00000564172 TUBA3EQ6PEY2 450 aa17.18■□□□□ 0.34
GDE1-203ENST00000564172 LRRTM4Q86VH4 590 aa17.18■□□□□ 0.34
GDE1-203ENST00000564172 TRIM69Q86WT6 500 aa17.18■□□□□ 0.34
GDE1-203ENST00000564172 CLYBLQ8N0X4 340 aa17.18■□□□□ 0.34
GDE1-203ENST00000564172 AFAP1L2Q8N4X5 818 aa17.18■□□□□ 0.34
GDE1-203ENST00000564172 MCOLN3Q8TDD5 553 aa17.18■□□□□ 0.34
GDE1-203ENST00000564172 PRR11Q96HE9 360 aaPredicted RBP17.18■□□□□ 0.34
GDE1-203ENST00000564172 MYOCQ99972 504 aa17.18■□□□□ 0.34
GDE1-203ENST00000564172 TMEM79Q9BSE2 394 aa17.18■□□□□ 0.34
GDE1-203ENST00000564172 WDR55Q9H6Y2 383 aaPredicted RBP17.18■□□□□ 0.34
GDE1-203ENST00000564172 SIAEQ9HAT2 523 aa17.18■□□□□ 0.34
GDE1-203ENST00000564172 IL20Q9NYY1 176 aa17.18■□□□□ 0.34
GDE1-203ENST00000564172 WWOXQ9NZC7 414 aa17.18■□□□□ 0.34
GDE1-203ENST00000564172 GPR89AB7ZAQ6 455 aa17.17■□□□□ 0.34
GDE1-203ENST00000564172 GPR89BP0CG08 455 aa17.17■□□□□ 0.34
GDE1-203ENST00000564172 PRDX3P30048 256 aaKnown RBP17.17■□□□□ 0.34
GDE1-203ENST00000564172 GDF5P43026 501 aa17.17■□□□□ 0.34
GDE1-203ENST00000564172 NFE2L1Q14494 772 aa17.17■□□□□ 0.34
GDE1-203ENST00000564172 PLA2G4EQ3MJ16 856 aa17.17■□□□□ 0.34
GDE1-203ENST00000564172 TIGD2Q4W5G0 525 aa17.17■□□□□ 0.34
GDE1-203ENST00000564172 TMEM126BQ8IUX1 230 aa17.17■□□□□ 0.34
GDE1-203ENST00000564172 OR56A4Q8NGH8 313 aa17.17■□□□□ 0.34
GDE1-203ENST00000564172 HM13Q8TCT9 377 aa17.17■□□□□ 0.34
GDE1-203ENST00000564172 TRUB1Q8WWH5 349 aaKnown RBP17.17■□□□□ 0.34
GDE1-203ENST00000564172 OR52B2Q96RD2 323 aa17.17■□□□□ 0.34
GDE1-203ENST00000564172 NELL2Q99435 816 aa17.17■□□□□ 0.34
GDE1-203ENST00000564172 APOOQ9BUR5 198 aa17.17■□□□□ 0.34
GDE1-203ENST00000564172 CD244Q9BZW8 370 aa17.17■□□□□ 0.34
GDE1-203ENST00000564172 CCDC177Q9NQR7 707 aaPredicted RBP17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms