RNA–Protein interactions for RNA: ENST00000564096.1

CLK3-214, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 805 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-214ENST00000564096 GRHL2Q6ISB3 625 aa12.38□□□□□ -0.43
CLK3-214ENST00000564096 KANSL1Q7Z3B3 1105 aa12.38□□□□□ -0.43
CLK3-214ENST00000564096 SYVN1Q86TM6 617 aa12.38□□□□□ -0.43
CLK3-214ENST00000564096 GATAD2AQ86YP4 633 aa12.38□□□□□ -0.43
CLK3-214ENST00000564096 KRT78Q8N1N4 520 aa12.38□□□□□ -0.43
CLK3-214ENST00000564096 SLC25A45Q8N413 288 aa12.38□□□□□ -0.43
CLK3-214ENST00000564096 CDYL2Q8N8U2 506 aa12.38□□□□□ -0.43
CLK3-214ENST00000564096 OR4F6Q8NGB9 312 aa12.38□□□□□ -0.43
CLK3-214ENST00000564096 BCAS4Q8TDM0 211 aa12.38□□□□□ -0.43
CLK3-214ENST00000564096 JPH3Q8WXH2 748 aaPredicted RBP12.38□□□□□ -0.43
CLK3-214ENST00000564096 NAT6Q93015 286 aa12.38□□□□□ -0.43
CLK3-214ENST00000564096 MOCOSQ96EN8 888 aa12.38□□□□□ -0.43
CLK3-214ENST00000564096 CCT7Q99832 543 aa12.38□□□□□ -0.43
CLK3-214ENST00000564096 C20orf27Q9GZN8 174 aa12.38□□□□□ -0.43
CLK3-214ENST00000564096 ELOVL6Q9H5J4 265 aa12.38□□□□□ -0.43
CLK3-214ENST00000564096 CAAP1Q9H8G2 361 aa12.38□□□□□ -0.43
CLK3-214ENST00000564096 ZNF395Q9H8N7 513 aaPredicted RBP12.38□□□□□ -0.43
CLK3-214ENST00000564096 IL21RQ9HBE5 538 aa12.38□□□□□ -0.43
CLK3-214ENST00000564096 MRPS30Q9NP92 439 aaKnown RBP12.38□□□□□ -0.43
CLK3-214ENST00000564096 INTS7Q9NVH2 962 aaKnown RBP12.38□□□□□ -0.43
CLK3-214ENST00000564096 SNX6Q9UNH7 406 aa12.38□□□□□ -0.43
CLK3-214ENST00000564096 FIS1Q9Y3D6 152 aa12.38□□□□□ -0.43
CLK3-214ENST00000564096 TRAF6Q9Y4K3 522 aa12.38□□□□□ -0.43
CLK3-214ENST00000564096 USH1CQ9Y6N9 552 aa12.38□□□□□ -0.43
CLK3-214ENST00000564096 ZFC3H1O60293 1989 aaKnown RBP12.38□□□□□ -0.43
CLK3-214ENST00000564096 TP53BP1Q12888 1972 aaPredicted RBP12.38□□□□□ -0.43
CLK3-214ENST00000564096 PCDH15Q96QU1 1955 aa12.38□□□□□ -0.43
CLK3-214ENST00000564096 PRAMEF33A0A0G2JMD5 474 aa12.37□□□□□ -0.43
CLK3-214ENST00000564096 LNP1A1A4G5 178 aa12.37□□□□□ -0.43
CLK3-214ENST00000564096 OR6C74A6NCV1 312 aa12.37□□□□□ -0.43
CLK3-214ENST00000564096 UBFD1O14562 309 aaKnown RBP12.37□□□□□ -0.43
CLK3-214ENST00000564096 FLRT2O43155 660 aa12.37□□□□□ -0.43
CLK3-214ENST00000564096 DUX1O43812 170 aa12.37□□□□□ -0.43
CLK3-214ENST00000564096 UBXN7O94888 489 aa12.37□□□□□ -0.43
CLK3-214ENST00000564096 OR4F21O95013 312 aa12.37□□□□□ -0.43
CLK3-214ENST00000564096 CAPN1P07384 714 aa12.37□□□□□ -0.43
CLK3-214ENST00000564096 FGF4P08620 206 aa12.37□□□□□ -0.43
CLK3-214ENST00000564096 ZNF806P0C7X5 589 aa12.37□□□□□ -0.43
CLK3-214ENST00000564096 JUPP14923 745 aa12.37□□□□□ -0.43
CLK3-214ENST00000564096 GLB1P16278 677 aa12.37□□□□□ -0.43
CLK3-214ENST00000564096 AMD1P17707 334 aa12.37□□□□□ -0.43
CLK3-214ENST00000564096 SERPINB1P30740 379 aa12.37□□□□□ -0.43
CLK3-214ENST00000564096 GRK3P35626 688 aa12.37□□□□□ -0.43
CLK3-214ENST00000564096 GRK6P43250 576 aa12.37□□□□□ -0.43
CLK3-214ENST00000564096 DUSP3P51452 185 aaPredicted RBP12.37□□□□□ -0.43
CLK3-214ENST00000564096 CCR8P51685 355 aa12.37□□□□□ -0.43
CLK3-214ENST00000564096 IFT88Q13099 833 aa12.37□□□□□ -0.43
CLK3-214ENST00000564096 CCDC6Q16204 474 aa12.37□□□□□ -0.43
CLK3-214ENST00000564096 PDCD2Q16342 344 aaPredicted RBP12.37□□□□□ -0.43
CLK3-214ENST00000564096 ZXDCQ2QGD7 858 aaPredicted RBP12.37□□□□□ -0.43
CLK3-214ENST00000564096 TCEAL6Q6IPX3 200 aa12.37□□□□□ -0.43
CLK3-214ENST00000564096 LETMD1Q6P1Q0 360 aa12.37□□□□□ -0.43
CLK3-214ENST00000564096 ZNF438Q7Z4V0 828 aa12.37□□□□□ -0.43
CLK3-214ENST00000564096 ADCK2Q7Z695 626 aa12.37□□□□□ -0.43
CLK3-214ENST00000564096 SLC35F3Q8IY50 421 aa12.37□□□□□ -0.43
CLK3-214ENST00000564096 C2orf73Q8N5S3 287 aaPredicted RBP12.37□□□□□ -0.43
CLK3-214ENST00000564096 ANKS4BQ8N8V4 417 aa12.37□□□□□ -0.43
CLK3-214ENST00000564096 FAM181AQ8N9Y4 354 aa12.37□□□□□ -0.43
CLK3-214ENST00000564096 L3MBTL4Q8NA19 623 aa12.37□□□□□ -0.43
CLK3-214ENST00000564096 SUMF1Q8NBK3 374 aa12.37□□□□□ -0.43
CLK3-214ENST00000564096 METTL6Q8TCB7 284 aa12.37□□□□□ -0.43
CLK3-214ENST00000564096 TWIST2Q8WVJ9 160 aa12.37□□□□□ -0.43
CLK3-214ENST00000564096 TCEAL3Q969E4 200 aa12.37□□□□□ -0.43
CLK3-214ENST00000564096 NEIL2Q969S2 332 aa12.37□□□□□ -0.43
CLK3-214ENST00000564096 AHCYL2Q96HN2 611 aaKnown RBP12.37□□□□□ -0.43
CLK3-214ENST00000564096 CDK15Q96Q40 435 aa12.37□□□□□ -0.43
CLK3-214ENST00000564096 OR4K3Q96R72 315 aa12.37□□□□□ -0.43
CLK3-214ENST00000564096 CCT8L2Q96SF2 557 aa12.37□□□□□ -0.43
CLK3-214ENST00000564096 AIF1LQ9BQI0 150 aa12.37□□□□□ -0.43
CLK3-214ENST00000564096 ACAT2Q9BWD1 397 aa12.37□□□□□ -0.43
CLK3-214ENST00000564096 PITHD1Q9GZP4 211 aaPredicted RBP12.37□□□□□ -0.43
CLK3-214ENST00000564096 SMOC1Q9H4F8 434 aa12.37□□□□□ -0.43
CLK3-214ENST00000564096 DNAAF2Q9NVR5 837 aaKnown RBP12.37□□□□□ -0.43
CLK3-214ENST00000564096 PNPOQ9NVS9 261 aa12.37□□□□□ -0.43
CLK3-214ENST00000564096 KCNK4Q9NYG8 393 aa12.37□□□□□ -0.43
CLK3-214ENST00000564096 ACTR10Q9NZ32 417 aa12.37□□□□□ -0.43
CLK3-214ENST00000564096 ANKMY1Q9P2S6 941 aa12.37□□□□□ -0.43
CLK3-214ENST00000564096 LRIT1Q9P2V4 623 aa12.37□□□□□ -0.43
CLK3-214ENST00000564096 ZDHHC2Q9UIJ5 367 aa12.37□□□□□ -0.43
CLK3-214ENST00000564096 ZNF318Q5VUA4 2279 aa12.37□□□□□ -0.43
CLK3-214ENST00000564096 A0A0G2JND7 137 aa12.36□□□□□ -0.43
CLK3-214ENST00000564096 A0A1W2PPV9 198 aa12.36□□□□□ -0.43
CLK3-214ENST00000564096 BTN3A3O00478 584 aa12.36□□□□□ -0.43
CLK3-214ENST00000564096 SKAP2O75563 359 aaPredicted RBP12.36□□□□□ -0.43
CLK3-214ENST00000564096 LMNAP02545 664 aaKnown RBP12.36□□□□□ -0.43
CLK3-214ENST00000564096 PROS1P07225 676 aa12.36□□□□□ -0.43
CLK3-214ENST00000564096 CDH1P12830 882 aa12.36□□□□□ -0.43
CLK3-214ENST00000564096 ALOX15P16050 662 aaPredicted RBP12.36□□□□□ -0.43
CLK3-214ENST00000564096 PNLIPP16233 465 aa12.36□□□□□ -0.43
CLK3-214ENST00000564096 NPPBP16860 134 aa12.36□□□□□ -0.43
CLK3-214ENST00000564096 EPORP19235 508 aa12.36□□□□□ -0.43
CLK3-214ENST00000564096 PSMB5P28074 263 aa12.36□□□□□ -0.43
CLK3-214ENST00000564096 NBL1P41271 181 aa12.36□□□□□ -0.43
CLK3-214ENST00000564096 CASP2P42575 452 aa12.36□□□□□ -0.43
CLK3-214ENST00000564096 GPR3P46089 330 aa12.36□□□□□ -0.43
CLK3-214ENST00000564096 AQP5P55064 265 aa12.36□□□□□ -0.43
CLK3-214ENST00000564096 ERVPABLB-1P60509 514 aa12.36□□□□□ -0.43
CLK3-214ENST00000564096 GPLD1P80108 840 aa12.36□□□□□ -0.43
CLK3-214ENST00000564096 DAB2P98082 770 aa12.36□□□□□ -0.43
CLK3-214ENST00000564096 ZNF33BQ06732 778 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms