RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 SLC35F3Q8IY50 421 aa12.48□□□□□ -0.41
SPG7-209ENST00000564047 LINC01555Q8NAE3 123 aa12.48□□□□□ -0.41
SPG7-209ENST00000564047 PPFIBP2Q8ND30 876 aa12.48□□□□□ -0.41
SPG7-209ENST00000564047 OR4E2Q8NGC2 313 aa12.48□□□□□ -0.41
SPG7-209ENST00000564047 OR6C4Q8NGE1 309 aa12.48□□□□□ -0.41
SPG7-209ENST00000564047 CCT6BQ92526 530 aa12.48□□□□□ -0.41
SPG7-209ENST00000564047 PYCR2Q96C36 320 aa12.48□□□□□ -0.41
SPG7-209ENST00000564047 MOCOSQ96EN8 888 aa12.48□□□□□ -0.41
SPG7-209ENST00000564047 C7orf26Q96N11 449 aa12.48□□□□□ -0.41
SPG7-209ENST00000564047 NSUN5Q96P11 429 aaKnown RBP12.48□□□□□ -0.41
SPG7-209ENST00000564047 MIPEPQ99797 713 aa12.48□□□□□ -0.41
SPG7-209ENST00000564047 PCBD2Q9H0N5 130 aa12.48□□□□□ -0.41
SPG7-209ENST00000564047 SRMSQ9H3Y6 488 aa12.48□□□□□ -0.41
SPG7-209ENST00000564047 XKR8Q9H6D3 395 aa12.48□□□□□ -0.41
SPG7-209ENST00000564047 EML4Q9HC35 981 aaKnown RBP12.48□□□□□ -0.41
SPG7-209ENST00000564047 ZBTB26Q9HCK0 441 aa12.48□□□□□ -0.41
SPG7-209ENST00000564047 ACSS2Q9NR19 701 aa12.48□□□□□ -0.41
SPG7-209ENST00000564047 INTS7Q9NVH2 962 aaKnown RBP12.48□□□□□ -0.41
SPG7-209ENST00000564047 GPRC5BQ9NZH0 403 aa12.48□□□□□ -0.41
SPG7-209ENST00000564047 STK38LQ9Y2H1 464 aa12.48□□□□□ -0.41
SPG7-209ENST00000564047 A0A1W2PPV9 198 aa12.47□□□□□ -0.41
SPG7-209ENST00000564047 SIGLEC6O43699 453 aa12.47□□□□□ -0.41
SPG7-209ENST00000564047 ITM2AO43736 263 aa12.47□□□□□ -0.41
SPG7-209ENST00000564047 NUDT21O43809 227 aaKnown RBP12.47□□□□□ -0.41
SPG7-209ENST00000564047 HSPA4LO95757 839 aa12.47□□□□□ -0.41
SPG7-209ENST00000564047 GLB1P16278 677 aa12.47□□□□□ -0.41
SPG7-209ENST00000564047 NPPBP16860 134 aa12.47□□□□□ -0.41
SPG7-209ENST00000564047 ARRB2P32121 409 aa12.47□□□□□ -0.41
SPG7-209ENST00000564047 OCRLQ01968 901 aa12.47□□□□□ -0.41
SPG7-209ENST00000564047 PCDH1Q08174 1060 aa12.47□□□□□ -0.41
SPG7-209ENST00000564047 CDC16Q13042 620 aa12.47□□□□□ -0.41
SPG7-209ENST00000564047 SLC14A1Q13336 389 aa12.47□□□□□ -0.41
SPG7-209ENST00000564047 NR0B2Q15466 257 aa12.47□□□□□ -0.41
SPG7-209ENST00000564047 INAVAQ3KP66 663 aa12.47□□□□□ -0.41
SPG7-209ENST00000564047 PRAMEF13Q5VWM6 474 aa12.47□□□□□ -0.41
SPG7-209ENST00000564047 SUSD1Q6UWL2 747 aa12.47□□□□□ -0.41
SPG7-209ENST00000564047 LCTLQ6UWM7 567 aa12.47□□□□□ -0.41
SPG7-209ENST00000564047 RPS27LQ71UM5 84 aaKnown RBP12.47□□□□□ -0.41
SPG7-209ENST00000564047 ZNF438Q7Z4V0 828 aa12.47□□□□□ -0.41
SPG7-209ENST00000564047 ADGRF3Q8IZF5 1079 aa12.47□□□□□ -0.41
SPG7-209ENST00000564047 LSMEM2Q8N112 164 aa12.47□□□□□ -0.41
SPG7-209ENST00000564047 EID2Q8N6I1 236 aa12.47□□□□□ -0.41
SPG7-209ENST00000564047 SNX31Q8N9S9 440 aa12.47□□□□□ -0.41
SPG7-209ENST00000564047 TRPC4APQ8TEL6 797 aa12.47□□□□□ -0.41
SPG7-209ENST00000564047 JPH3Q8WXH2 748 aaPredicted RBP12.47□□□□□ -0.41
SPG7-209ENST00000564047 OR4K3Q96R72 315 aa12.47□□□□□ -0.41
SPG7-209ENST00000564047 SLC38A3Q99624 504 aa12.47□□□□□ -0.41
SPG7-209ENST00000564047 NRTNQ99748 197 aa12.47□□□□□ -0.41
SPG7-209ENST00000564047 ELAC2Q9BQ52 826 aaKnown RBP12.47□□□□□ -0.41
SPG7-209ENST00000564047 HAUS8Q9BT25 410 aa12.47□□□□□ -0.41
SPG7-209ENST00000564047 C20orf27Q9GZN8 174 aa12.47□□□□□ -0.41
SPG7-209ENST00000564047 NOL11Q9H8H0 719 aaKnown RBP12.47□□□□□ -0.41
SPG7-209ENST00000564047 IPPKQ9H8X2 491 aa12.47□□□□□ -0.41
SPG7-209ENST00000564047 SEMA4BQ9NPR2 832 aaPredicted RBP12.47□□□□□ -0.41
SPG7-209ENST00000564047 RXFP3Q9NSD7 469 aa12.47□□□□□ -0.41
SPG7-209ENST00000564047 LRIT1Q9P2V4 623 aa12.47□□□□□ -0.41
SPG7-209ENST00000564047 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.47□□□□□ -0.41
SPG7-209ENST00000564047 ENTPD2Q9Y5L3 495 aa12.47□□□□□ -0.41
SPG7-209ENST00000564047 KCNE2Q9Y6J6 123 aa12.47□□□□□ -0.41
SPG7-209ENST00000564047 RNF215Q9Y6U7 377 aa12.47□□□□□ -0.41
SPG7-209ENST00000564047 RHPN2P1A8MT19 583 aa12.46□□□□□ -0.41
SPG7-209ENST00000564047 BTN3A3O00478 584 aa12.46□□□□□ -0.41
SPG7-209ENST00000564047 OR7A17O14581 309 aa12.46□□□□□ -0.41
SPG7-209ENST00000564047 PRICKLE3O43900 615 aaPredicted RBP12.46□□□□□ -0.41
SPG7-209ENST00000564047 EDF1O60869 148 aaKnown RBP12.46□□□□□ -0.41
SPG7-209ENST00000564047 LYPLA1O75608 230 aaPredicted RBP12.46□□□□□ -0.41
SPG7-209ENST00000564047 OTCP00480 354 aa12.46□□□□□ -0.41
SPG7-209ENST00000564047 CHRNGP07510 517 aa12.46□□□□□ -0.41
SPG7-209ENST00000564047 CHRM5P08912 532 aaPredicted RBP12.46□□□□□ -0.41
SPG7-209ENST00000564047 PNLIPP16233 465 aa12.46□□□□□ -0.41
SPG7-209ENST00000564047 EPORP19235 508 aa12.46□□□□□ -0.41
SPG7-209ENST00000564047 GRK6P43250 576 aa12.46□□□□□ -0.41
SPG7-209ENST00000564047 GPR3P46089 330 aa12.46□□□□□ -0.41
SPG7-209ENST00000564047 EPHA4P54764 986 aa12.46□□□□□ -0.41
SPG7-209ENST00000564047 PKNOX1P55347 436 aa12.46□□□□□ -0.41
SPG7-209ENST00000564047 FOXC1Q12948 553 aa12.46□□□□□ -0.41
SPG7-209ENST00000564047 PRKAA1Q13131 559 aa12.46□□□□□ -0.41
SPG7-209ENST00000564047 TSTA3Q13630 321 aaPredicted RBP12.46□□□□□ -0.41
SPG7-209ENST00000564047 KIR2DS3Q14952 304 aa12.46□□□□□ -0.41
SPG7-209ENST00000564047 NR1D2Q14995 579 aa12.46□□□□□ -0.41
SPG7-209ENST00000564047 RBBP7Q16576 425 aa12.46□□□□□ -0.41
SPG7-209ENST00000564047 THEMIS2Q5TEJ8 643 aa12.46□□□□□ -0.41
SPG7-209ENST00000564047 KLHL35Q6PF15 583 aa12.46□□□□□ -0.41
SPG7-209ENST00000564047 ATG14Q6ZNE5 492 aa12.46□□□□□ -0.41
SPG7-209ENST00000564047 SPATA21Q7Z572 469 aa12.46□□□□□ -0.41
SPG7-209ENST00000564047 OOSP2Q86WS3 158 aa12.46□□□□□ -0.41
SPG7-209ENST00000564047 KIRREL3Q8IZU9 778 aa12.46□□□□□ -0.41
SPG7-209ENST00000564047 C2orf73Q8N5S3 287 aaPredicted RBP12.46□□□□□ -0.41
SPG7-209ENST00000564047 GBP7Q8N8V2 638 aaPredicted RBP12.46□□□□□ -0.41
SPG7-209ENST00000564047 LMNTD1Q8N9Z9 388 aa12.46□□□□□ -0.41
SPG7-209ENST00000564047 SLC22A18Q96BI1 424 aa12.46□□□□□ -0.41
SPG7-209ENST00000564047 APOLD1Q96LR9 279 aa12.46□□□□□ -0.41
SPG7-209ENST00000564047 MAGEB10Q96LZ2 347 aaPredicted RBP12.46□□□□□ -0.41
SPG7-209ENST00000564047 ZNF382Q96SR6 550 aa12.46□□□□□ -0.41
SPG7-209ENST00000564047 SORT1Q99523 831 aa12.46□□□□□ -0.41
SPG7-209ENST00000564047 NTMT1Q9BV86 223 aa12.46□□□□□ -0.41
SPG7-209ENST00000564047 TBC1D10AQ9BXI6 508 aa12.46□□□□□ -0.41
SPG7-209ENST00000564047 ZNF395Q9H8N7 513 aaPredicted RBP12.46□□□□□ -0.41
SPG7-209ENST00000564047 SLCO1B3Q9NPD5 702 aa12.46□□□□□ -0.41
SPG7-209ENST00000564047 FGFR1OP2Q9NVK5 253 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms