RNA–Protein interactions for RNA: ENST00000563829.5

SCAMP2-204, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 3,162 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-204ENST00000563829 ING3Q9NXR8 418 aa12.03□□□□□ -0.48
SCAMP2-204ENST00000563829 CD274Q9NZQ7 290 aa12.03□□□□□ -0.48
SCAMP2-204ENST00000563829 ZMYM5Q9UJ78 669 aa12.03□□□□□ -0.48
SCAMP2-204ENST00000563829 ALG5Q9Y673 324 aa12.03□□□□□ -0.48
SCAMP2-204ENST00000563829 PIRTP0C851 137 aa12.02□□□□□ -0.48
SCAMP2-204ENST00000563829 NPR3P17342 541 aa12.02□□□□□ -0.48
SCAMP2-204ENST00000563829 CD86P42081 329 aa12.02□□□□□ -0.48
SCAMP2-204ENST00000563829 BRCC3P46736 316 aa12.02□□□□□ -0.48
SCAMP2-204ENST00000563829 DBPQ10586 325 aaPredicted RBP12.02□□□□□ -0.48
SCAMP2-204ENST00000563829 SCAPQ12770 1279 aa12.02□□□□□ -0.48
SCAMP2-204ENST00000563829 SEMA3AQ14563 771 aa12.02□□□□□ -0.48
SCAMP2-204ENST00000563829 GPR19Q15760 415 aa12.02□□□□□ -0.48
SCAMP2-204ENST00000563829 FBXO43Q4G163 708 aa12.02□□□□□ -0.48
SCAMP2-204ENST00000563829 C10orf62Q5T681 223 aaPredicted RBP12.02□□□□□ -0.48
SCAMP2-204ENST00000563829 UTP15Q8TED0 518 aaKnown RBP12.02□□□□□ -0.48
SCAMP2-204ENST00000563829 METTL2AQ96IZ6 378 aaKnown RBP12.02□□□□□ -0.48
SCAMP2-204ENST00000563829 COL21A1Q96P44 957 aa12.02□□□□□ -0.48
SCAMP2-204ENST00000563829 MGLLQ99685 303 aa12.02□□□□□ -0.48
SCAMP2-204ENST00000563829 TRIM45Q9H8W5 580 aaPredicted RBP12.02□□□□□ -0.48
SCAMP2-204ENST00000563829 QTRT2Q9H974 415 aaKnown RBP12.02□□□□□ -0.48
SCAMP2-204ENST00000563829 HEBP1Q9NRV9 189 aa12.02□□□□□ -0.48
SCAMP2-204ENST00000563829 MCUBQ9NWR8 336 aa12.02□□□□□ -0.48
SCAMP2-204ENST00000563829 THUMPD1Q9NXG2 353 aaKnown RBP12.02□□□□□ -0.48
SCAMP2-204ENST00000563829 KCNE2Q9Y6J6 123 aa12.02□□□□□ -0.48
SCAMP2-204ENST00000563829 MATN3O15232 486 aa12.02□□□□□ -0.49
SCAMP2-204ENST00000563829 GPX5O75715 221 aa12.02□□□□□ -0.49
SCAMP2-204ENST00000563829 PGRP06401 933 aa12.02□□□□□ -0.49
SCAMP2-204ENST00000563829 ZNF30P17039 623 aa12.02□□□□□ -0.49
SCAMP2-204ENST00000563829 HMGCS2P54868 508 aa12.02□□□□□ -0.49
SCAMP2-204ENST00000563829 RAB25P57735 213 aa12.02□□□□□ -0.49
SCAMP2-204ENST00000563829 CTAG1AP78358 180 aa12.02□□□□□ -0.49
SCAMP2-204ENST00000563829 RUNX1T1Q06455 604 aa12.02□□□□□ -0.49
SCAMP2-204ENST00000563829 MGAT3Q09327 533 aa12.02□□□□□ -0.49
SCAMP2-204ENST00000563829 NADSYN1Q6IA69 706 aa12.02□□□□□ -0.49
SCAMP2-204ENST00000563829 CCDC117Q8IWD4 279 aaPredicted RBP12.02□□□□□ -0.49
SCAMP2-204ENST00000563829 B3GALNT2Q8NCR0 500 aa12.02□□□□□ -0.49
SCAMP2-204ENST00000563829 FUBP1Q96AE4 644 aaKnown RBP12.02□□□□□ -0.49
SCAMP2-204ENST00000563829 DPY30Q9C005 99 aa12.02□□□□□ -0.49
SCAMP2-204ENST00000563829 MFSD1Q9H3U5 465 aa12.02□□□□□ -0.49
SCAMP2-204ENST00000563829 FAM124BQ9H5Z6 455 aaPredicted RBP12.02□□□□□ -0.49
SCAMP2-204ENST00000563829 REEP1Q9H902 201 aa12.02□□□□□ -0.49
SCAMP2-204ENST00000563829 NT5MQ9NPB1 228 aa12.02□□□□□ -0.49
SCAMP2-204ENST00000563829 KLK4Q9Y5K2 254 aa12.02□□□□□ -0.49
SCAMP2-204ENST00000563829 B3GALT4O96024 378 aa12.02□□□□□ -0.49
SCAMP2-204ENST00000563829 CSF3P09919 207 aa12.02□□□□□ -0.49
SCAMP2-204ENST00000563829 MLLT6P55198 1093 aaPredicted RBP12.02□□□□□ -0.49
SCAMP2-204ENST00000563829 OLR1P78380 273 aa12.02□□□□□ -0.49
SCAMP2-204ENST00000563829 DSC3Q14574 896 aa12.02□□□□□ -0.49
SCAMP2-204ENST00000563829 ABRAXAS2Q15018 415 aa12.02□□□□□ -0.49
SCAMP2-204ENST00000563829 KYAT1Q16773 422 aa12.02□□□□□ -0.49
SCAMP2-204ENST00000563829 PYDC2Q56P42 97 aa12.02□□□□□ -0.49
SCAMP2-204ENST00000563829 RUNDC3AQ59EK9 446 aa12.02□□□□□ -0.49
SCAMP2-204ENST00000563829 SGO1Q5FBB7 561 aa12.02□□□□□ -0.49
SCAMP2-204ENST00000563829 SLC35F1Q5T1Q4 408 aa12.02□□□□□ -0.49
SCAMP2-204ENST00000563829 TMEM65Q6PI78 240 aa12.02□□□□□ -0.49
SCAMP2-204ENST00000563829 KLHL17Q6TDP4 642 aa12.02□□□□□ -0.49
SCAMP2-204ENST00000563829 METTL7BQ6UX53 244 aa12.02□□□□□ -0.49
SCAMP2-204ENST00000563829 C16orf62Q7Z3J2 963 aa12.02□□□□□ -0.49
SCAMP2-204ENST00000563829 ZNF605Q86T29 641 aa12.02□□□□□ -0.49
SCAMP2-204ENST00000563829 ARHGAP12Q8IWW6 846 aa12.02□□□□□ -0.49
SCAMP2-204ENST00000563829 PHC2Q8IXK0 858 aa12.02□□□□□ -0.49
SCAMP2-204ENST00000563829 EFHBQ8N7U6 833 aa12.02□□□□□ -0.49
SCAMP2-204ENST00000563829 REPS2Q8NFH8 660 aa12.02□□□□□ -0.49
SCAMP2-204ENST00000563829 TRPM4Q8TD43 1214 aa12.02□□□□□ -0.49
SCAMP2-204ENST00000563829 BLOC1S5Q8TDH9 187 aa12.02□□□□□ -0.49
SCAMP2-204ENST00000563829 REPS1Q96D71 796 aa12.02□□□□□ -0.49
SCAMP2-204ENST00000563829 GABARAPL1Q9H0R8 117 aa12.02□□□□□ -0.49
SCAMP2-204ENST00000563829 PPIL3Q9H2H8 161 aaKnown RBP12.02□□□□□ -0.49
SCAMP2-204ENST00000563829 C3orf14Q9HBI5 128 aa12.02□□□□□ -0.49
SCAMP2-204ENST00000563829 IL1RAPQ9NPH3 570 aa12.02□□□□□ -0.49
SCAMP2-204ENST00000563829 KLHL21Q9UJP4 597 aa12.02□□□□□ -0.49
SCAMP2-204ENST00000563829 AP3M1Q9Y2T2 418 aa12.02□□□□□ -0.49
SCAMP2-204ENST00000563829 A0A075B6Q4 140 aa12.01□□□□□ -0.49
SCAMP2-204ENST00000563829 SMIM30A4D0T7 59 aa12.01□□□□□ -0.49
SCAMP2-204ENST00000563829 FABP3P05413 133 aa12.01□□□□□ -0.49
SCAMP2-204ENST00000563829 ALAS2P22557 587 aa12.01□□□□□ -0.49
SCAMP2-204ENST00000563829 KCNQ1P51787 676 aa12.01□□□□□ -0.49
SCAMP2-204ENST00000563829 CSNK2BP67870 215 aa12.01□□□□□ -0.49
SCAMP2-204ENST00000563829 MRPL28Q13084 256 aaKnown RBP12.01□□□□□ -0.49
SCAMP2-204ENST00000563829 ASAH1Q13510 395 aa12.01□□□□□ -0.49
SCAMP2-204ENST00000563829 KCTD2Q14681 263 aa12.01□□□□□ -0.49
SCAMP2-204ENST00000563829 POU4F3Q15319 338 aa12.01□□□□□ -0.49
SCAMP2-204ENST00000563829 FLYWCH1Q4VC44 716 aa12.01□□□□□ -0.49
SCAMP2-204ENST00000563829 INO80DQ53TQ3 878 aaPredicted RBP12.01□□□□□ -0.49
SCAMP2-204ENST00000563829 FBXO47Q5MNV8 452 aa12.01□□□□□ -0.49
SCAMP2-204ENST00000563829 TIGD7Q6NT04 549 aaPredicted RBP12.01□□□□□ -0.49
SCAMP2-204ENST00000563829 DIRAS2Q96HU8 199 aa12.01□□□□□ -0.49
SCAMP2-204ENST00000563829 SPATA9Q9BWV2 254 aa12.01□□□□□ -0.49
SCAMP2-204ENST00000563829 NIPAL2Q9H841 368 aa12.01□□□□□ -0.49
SCAMP2-204ENST00000563829 GOLGA2P5Q9HBQ8 144 aa12.01□□□□□ -0.49
SCAMP2-204ENST00000563829 FABP12A6NFH5 140 aa12.01□□□□□ -0.49
SCAMP2-204ENST00000563829 FFAR3O14843 346 aa12.01□□□□□ -0.49
SCAMP2-204ENST00000563829 GPR42O15529 346 aa12.01□□□□□ -0.49
SCAMP2-204ENST00000563829 AOC2O75106 756 aa12.01□□□□□ -0.49
SCAMP2-204ENST00000563829 SERPINI2O75830 405 aa12.01□□□□□ -0.49
SCAMP2-204ENST00000563829 TP53P04637 393 aaPredicted RBP12.01□□□□□ -0.49
SCAMP2-204ENST00000563829 TSPAN19P0C672 248 aa12.01□□□□□ -0.49
SCAMP2-204ENST00000563829 AIF1P55008 147 aa12.01□□□□□ -0.49
SCAMP2-204ENST00000563829 C18orf21Q32NC0 220 aaPredicted RBP12.01□□□□□ -0.49
SCAMP2-204ENST00000563829 TIMM50Q3ZCQ8 353 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms