RNA–Protein interactions for RNA: ENST00000563683.5

RNF40-204, Transcript of ring finger protein 40, humanhuman

TSL 5 BASIC

Gene RNF40, Length 4,063 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-204ENST00000563683 ALDH6A1Q02252 535 aaKnown RBP10.18□□□□□ -0.78
RNF40-204ENST00000563683 EMX2Q04743 252 aa10.18□□□□□ -0.78
RNF40-204ENST00000563683 RUNX1T1Q06455 604 aa10.18□□□□□ -0.78
RNF40-204ENST00000563683 IRF5Q13568 498 aa10.18□□□□□ -0.78
RNF40-204ENST00000563683 GPR33Q49SQ1 333 aa10.18□□□□□ -0.78
RNF40-204ENST00000563683 TPGS2Q68CL5 300 aa10.18□□□□□ -0.78
RNF40-204ENST00000563683 TBPL2Q6SJ96 375 aa10.18□□□□□ -0.78
RNF40-204ENST00000563683 RGL4Q8IZJ4 473 aa10.18□□□□□ -0.78
RNF40-204ENST00000563683 MFSD4AQ8N468 514 aa10.18□□□□□ -0.78
RNF40-204ENST00000563683 KREMEN2Q8NCW0 462 aa10.18□□□□□ -0.78
RNF40-204ENST00000563683 LILRB4Q8NHJ6 448 aa10.18□□□□□ -0.78
RNF40-204ENST00000563683 BPIFB1Q8TDL5 484 aa10.18□□□□□ -0.78
RNF40-204ENST00000563683 SLC22A17Q8WUG5 538 aa10.18□□□□□ -0.78
RNF40-204ENST00000563683 CYB5D2Q8WUJ1 264 aa10.18□□□□□ -0.78
RNF40-204ENST00000563683 HOXD1Q9GZZ0 328 aa10.18□□□□□ -0.78
RNF40-204ENST00000563683 EPS8L2Q9H6S3 715 aa10.18□□□□□ -0.78
RNF40-204ENST00000563683 TNFRSF12AQ9NP84 129 aa10.18□□□□□ -0.78
RNF40-204ENST00000563683 IKZF3Q9UKT9 509 aa10.18□□□□□ -0.78
RNF40-204ENST00000563683 TESMINQ9Y4I5 508 aa10.18□□□□□ -0.78
RNF40-204ENST00000563683 TANC1Q9C0D5 1861 aa10.18□□□□□ -0.78
RNF40-204ENST00000563683 DOCK1Q14185 1865 aa10.18□□□□□ -0.78
RNF40-204ENST00000563683 ANKRD34BA5PLL1 514 aa10.18□□□□□ -0.78
RNF40-204ENST00000563683 UBFD1O14562 309 aaKnown RBP10.18□□□□□ -0.78
RNF40-204ENST00000563683 DYRK3O43781 588 aa10.18□□□□□ -0.78
RNF40-204ENST00000563683 XYLBO75191 536 aa10.18□□□□□ -0.78
RNF40-204ENST00000563683 SCELO95171 688 aa10.18□□□□□ -0.78
RNF40-204ENST00000563683 PPM1AP35813 382 aa10.18□□□□□ -0.78
RNF40-204ENST00000563683 IST1P53990 364 aa10.18□□□□□ -0.78
RNF40-204ENST00000563683 IFITM3Q01628 133 aa10.18□□□□□ -0.78
RNF40-204ENST00000563683 RFTN2Q52LD8 501 aaPredicted RBP10.18□□□□□ -0.78
RNF40-204ENST00000563683 SLX4IPQ5VYV7 408 aa10.18□□□□□ -0.78
RNF40-204ENST00000563683 TMEM220Q6QAJ8 160 aa10.18□□□□□ -0.78
RNF40-204ENST00000563683 ZNF605Q86T29 641 aa10.18□□□□□ -0.78
RNF40-204ENST00000563683 BBS7Q8IWZ6 715 aa10.18□□□□□ -0.78
RNF40-204ENST00000563683 GLB1L3Q8NCI6 653 aaPredicted RBP10.18□□□□□ -0.78
RNF40-204ENST00000563683 SLAIN1Q8ND83 568 aa10.18□□□□□ -0.78
RNF40-204ENST00000563683 PSMA8Q8TAA3 256 aa10.18□□□□□ -0.78
RNF40-204ENST00000563683 ZNF382Q96SR6 550 aa10.18□□□□□ -0.78
RNF40-204ENST00000563683 MGME1Q9BQP7 344 aa10.18□□□□□ -0.78
RNF40-204ENST00000563683 TOR3AQ9H497 397 aa10.18□□□□□ -0.78
RNF40-204ENST00000563683 SLC32A1Q9H598 525 aa10.18□□□□□ -0.78
RNF40-204ENST00000563683 DDX28Q9NUL7 540 aaKnown RBP10.18□□□□□ -0.78
RNF40-204ENST00000563683 FAM118AQ9NWS6 357 aa10.18□□□□□ -0.78
RNF40-204ENST00000563683 AHSPQ9NZD4 102 aa10.18□□□□□ -0.78
RNF40-204ENST00000563683 SLAMF8Q9P0V8 285 aa10.18□□□□□ -0.78
RNF40-204ENST00000563683 PCTPQ9UKL6 214 aa10.18□□□□□ -0.78
RNF40-204ENST00000563683 FAM172BPA6NC97 362 aa10.18□□□□□ -0.78
RNF40-204ENST00000563683 AXIN1O15169 862 aa10.18□□□□□ -0.78
RNF40-204ENST00000563683 RFPL2O75678 378 aa10.18□□□□□ -0.78
RNF40-204ENST00000563683 PGLSO95336 258 aa10.18□□□□□ -0.78
RNF40-204ENST00000563683 FADS2O95864 444 aaKnown RBP10.18□□□□□ -0.78
RNF40-204ENST00000563683 DDX5P17844 614 aaKnown RBP10.18□□□□□ -0.78
RNF40-204ENST00000563683 NADSYN1Q6IA69 706 aa10.18□□□□□ -0.78
RNF40-204ENST00000563683 LETMD1Q6P1Q0 360 aa10.18□□□□□ -0.78
RNF40-204ENST00000563683 TMEM207Q6UWW9 146 aa10.18□□□□□ -0.78
RNF40-204ENST00000563683 HEATR4Q86WZ0 1026 aa10.18□□□□□ -0.78
RNF40-204ENST00000563683 SVOPQ8N4V2 548 aa10.18□□□□□ -0.78
RNF40-204ENST00000563683 DCAF4L2Q8NA75 395 aa10.18□□□□□ -0.78
RNF40-204ENST00000563683 CHDHQ8NE62 594 aaPredicted RBP10.18□□□□□ -0.78
RNF40-204ENST00000563683 SUSD6Q92537 303 aa10.18□□□□□ -0.78
RNF40-204ENST00000563683 REPS1Q96D71 796 aa10.18□□□□□ -0.78
RNF40-204ENST00000563683 ZDHHC3Q9NYG2 299 aa10.18□□□□□ -0.78
RNF40-204ENST00000563683 DNAJB9Q9UBS3 223 aa10.18□□□□□ -0.78
RNF40-204ENST00000563683 SLCO3A1Q9UIG8 710 aa10.18□□□□□ -0.78
RNF40-204ENST00000563683 WASH4PA8MWX3 477 aa10.17□□□□□ -0.78
RNF40-204ENST00000563683 SMAD6O43541 496 aaKnown RBP10.17□□□□□ -0.78
RNF40-204ENST00000563683 ADAMTS4O75173 837 aa10.17□□□□□ -0.78
RNF40-204ENST00000563683 FGF4P08620 206 aa10.17□□□□□ -0.78
RNF40-204ENST00000563683 POU2F1P14859 743 aa10.17□□□□□ -0.78
RNF40-204ENST00000563683 IL12AP29459 219 aa10.17□□□□□ -0.78
RNF40-204ENST00000563683 HMGCLP35914 325 aa10.17□□□□□ -0.78
RNF40-204ENST00000563683 APLP1P51693 650 aa10.17□□□□□ -0.78
RNF40-204ENST00000563683 GRIK2Q13002 908 aa10.17□□□□□ -0.78
RNF40-204ENST00000563683 ZNF181Q2M3W8 571 aa10.17□□□□□ -0.78
RNF40-204ENST00000563683 TUBA3EQ6PEY2 450 aa10.17□□□□□ -0.78
RNF40-204ENST00000563683 Q6ZVL8 140 aa10.17□□□□□ -0.78
RNF40-204ENST00000563683 TSPAN33Q86UF1 283 aa10.17□□□□□ -0.78
RNF40-204ENST00000563683 RTN4RL1Q86UN2 441 aaPredicted RBP10.17□□□□□ -0.78
RNF40-204ENST00000563683 P2RY8Q86VZ1 359 aa10.17□□□□□ -0.78
RNF40-204ENST00000563683 HIPK1Q86Z02 1210 aa10.17□□□□□ -0.78
RNF40-204ENST00000563683 OR4A15Q8NGL6 344 aa10.17□□□□□ -0.78
RNF40-204ENST00000563683 MYOCQ99972 504 aa10.17□□□□□ -0.78
RNF40-204ENST00000563683 RNF38Q9H0F5 515 aa10.17□□□□□ -0.78
RNF40-204ENST00000563683 CLCA2Q9UQC9 943 aa10.17□□□□□ -0.78
RNF40-204ENST00000563683 PCDHB3Q9Y5E6 796 aa10.17□□□□□ -0.78
RNF40-204ENST00000563683 PCDHGA8Q9Y5G5 932 aa10.17□□□□□ -0.78
RNF40-204ENST00000563683 INSL5Q9Y5Q6 135 aa10.17□□□□□ -0.78
RNF40-204ENST00000563683 H0Y858 1186 aa10.17□□□□□ -0.78
RNF40-204ENST00000563683 AGRPO00253 132 aa10.17□□□□□ -0.78
RNF40-204ENST00000563683 INMTO95050 263 aa10.17□□□□□ -0.78
RNF40-204ENST00000563683 NPPAP01160 153 aa10.17□□□□□ -0.78
RNF40-204ENST00000563683 GBAP04062 536 aa10.17□□□□□ -0.78
RNF40-204ENST00000563683 ENO2P09104 434 aaPredicted RBP10.17□□□□□ -0.78
RNF40-204ENST00000563683 DBTP11182 482 aaKnown RBP10.17□□□□□ -0.78
RNF40-204ENST00000563683 PRPS2P11908 318 aa10.17□□□□□ -0.78
RNF40-204ENST00000563683 PHC1P78364 1004 aa10.17□□□□□ -0.78
RNF40-204ENST00000563683 SPIBQ01892 262 aa10.17□□□□□ -0.78
RNF40-204ENST00000563683 UBE3AQ05086 875 aa10.17□□□□□ -0.78
RNF40-204ENST00000563683 CAMK2BQ13554 666 aa10.17□□□□□ -0.78
RNF40-204ENST00000563683 TP53BP2Q13625 1128 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms