RNA–Protein interactions for RNA: ENST00000563235.5

SMG1-207, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-207ENST00000563235 DNAJB14Q8TBM8 379 aa4.63□□□□□ -1.67
SMG1-207ENST00000563235 NUDT8Q8WV74 236 aa4.63□□□□□ -1.67
SMG1-207ENST00000563235 HOXB13Q92826 284 aaPredicted RBP4.63□□□□□ -1.67
SMG1-207ENST00000563235 OTUB2Q96DC9 234 aa4.63□□□□□ -1.67
SMG1-207ENST00000563235 MMABQ96EY8 250 aaPredicted RBP4.63□□□□□ -1.67
SMG1-207ENST00000563235 NUDT11Q96G61 164 aa4.63□□□□□ -1.67
SMG1-207ENST00000563235 THOC3Q96J01 351 aaKnown RBP4.63□□□□□ -1.67
SMG1-207ENST00000563235 CHAMP1Q96JM3 812 aa4.63□□□□□ -1.67
SMG1-207ENST00000563235 OR6C3Q9NZP0 311 aa4.63□□□□□ -1.67
SMG1-207ENST00000563235 ARPP21Q9UBL0 812 aaPredicted RBP4.63□□□□□ -1.67
SMG1-207ENST00000563235 UBQLN2Q9UHD9 624 aa4.63□□□□□ -1.67
SMG1-207ENST00000563235 UTS2RQ9UKP6 389 aa4.63□□□□□ -1.67
SMG1-207ENST00000563235 MRPS33Q9Y291 106 aaKnown RBP4.63□□□□□ -1.67
SMG1-207ENST00000563235 FCF1Q9Y324 198 aaKnown RBP4.63□□□□□ -1.67
SMG1-207ENST00000563235 TSC22D4Q9Y3Q8 395 aa4.63□□□□□ -1.67
SMG1-207ENST00000563235 PTGDR2Q9Y5Y4 395 aa4.63□□□□□ -1.67
SMG1-207ENST00000563235 EFCAB6Q5THR3 1501 aa4.63□□□□□ -1.67
SMG1-207ENST00000563235 MST1RQ04912 1400 aa4.63□□□□□ -1.67
SMG1-207ENST00000563235 A0A1B0GUH1 482 aa4.63□□□□□ -1.67
SMG1-207ENST00000563235 DPPA5A6NC42 116 aa4.63□□□□□ -1.67
SMG1-207ENST00000563235 MAGEA13PA6NCF6 341 aa4.63□□□□□ -1.67
SMG1-207ENST00000563235 PRR23AA6NEV1 266 aa4.63□□□□□ -1.67
SMG1-207ENST00000563235 C5orf52A6NGY3 159 aa4.63□□□□□ -1.67
SMG1-207ENST00000563235 FBLL1A6NHQ2 334 aaKnown RBP4.63□□□□□ -1.67
SMG1-207ENST00000563235 CGB1A6NKQ9 187 aa4.63□□□□□ -1.67
SMG1-207ENST00000563235 WASH4PA8MWX3 477 aa4.63□□□□□ -1.67
SMG1-207ENST00000563235 ERVV-2B6SEH9 535 aa4.63□□□□□ -1.67
SMG1-207ENST00000563235 TEX22C9J3V5 150 aa4.63□□□□□ -1.67
SMG1-207ENST00000563235 KLF11O14901 512 aa4.63□□□□□ -1.67
SMG1-207ENST00000563235 MDM4O15151 490 aa4.63□□□□□ -1.67
SMG1-207ENST00000563235 OPHN1O60890 802 aa4.63□□□□□ -1.67
SMG1-207ENST00000563235 HSF2BPO75031 334 aa4.63□□□□□ -1.67
SMG1-207ENST00000563235 LEFTY1O75610 366 aa4.63□□□□□ -1.67
SMG1-207ENST00000563235 BCAR3O75815 825 aa4.63□□□□□ -1.67
SMG1-207ENST00000563235 SUN1O94901 812 aa4.63□□□□□ -1.67
SMG1-207ENST00000563235 TRUB2O95900 331 aaKnown RBP4.63□□□□□ -1.67
SMG1-207ENST00000563235 GNAO1P09471 354 aa4.63□□□□□ -1.67
SMG1-207ENST00000563235 CCDC166P0CW27 439 aa4.63□□□□□ -1.67
SMG1-207ENST00000563235 CPA3P15088 417 aa4.63□□□□□ -1.67
SMG1-207ENST00000563235 SMPD1P17405 629 aa4.63□□□□□ -1.67
SMG1-207ENST00000563235 HNF1AP20823 631 aa4.63□□□□□ -1.67
SMG1-207ENST00000563235 SOX18P35713 384 aa4.63□□□□□ -1.67
SMG1-207ENST00000563235 MAGEB1P43366 347 aa4.63□□□□□ -1.67
SMG1-207ENST00000563235 CCT3P49368 545 aaKnown RBP4.63□□□□□ -1.67
SMG1-207ENST00000563235 UCP3P55916 312 aa4.63□□□□□ -1.67
SMG1-207ENST00000563235 PPP2CBP62714 309 aa4.63□□□□□ -1.67
SMG1-207ENST00000563235 RPS15P62841 145 aaKnown RBP4.63□□□□□ -1.67
SMG1-207ENST00000563235 PPP2CAP67775 309 aa4.63□□□□□ -1.67
SMG1-207ENST00000563235 CDK18Q07002 472 aa4.63□□□□□ -1.67
SMG1-207ENST00000563235 SLC29A2Q14542 456 aa4.63□□□□□ -1.67
SMG1-207ENST00000563235 PDK3Q15120 406 aa4.63□□□□□ -1.67
SMG1-207ENST00000563235 GPR19Q15760 415 aa4.63□□□□□ -1.67
SMG1-207ENST00000563235 ZCWPW2Q504Y3 356 aa4.63□□□□□ -1.67
SMG1-207ENST00000563235 CELF3Q5SZQ8 465 aaKnown RBP4.63□□□□□ -1.67
SMG1-207ENST00000563235 PRAMEF7Q5VXH5 474 aa4.63□□□□□ -1.67
SMG1-207ENST00000563235 RCSD1Q6JBY9 416 aa4.63□□□□□ -1.67
SMG1-207ENST00000563235 KIAA1841Q6NSI8 718 aa4.63□□□□□ -1.67
SMG1-207ENST00000563235 ZSCAN25Q6NSZ9 544 aa4.63□□□□□ -1.67
SMG1-207ENST00000563235 Q6ZVL8 140 aa4.63□□□□□ -1.67
SMG1-207ENST00000563235 GDF7Q7Z4P5 450 aa4.63□□□□□ -1.67
SMG1-207ENST00000563235 LONP2Q86WA8 852 aa4.63□□□□□ -1.67
SMG1-207ENST00000563235 ZSWIM9Q86XI8 627 aa4.63□□□□□ -1.67
SMG1-207ENST00000563235 MAB21L3Q8N8X9 362 aa4.63□□□□□ -1.67
SMG1-207ENST00000563235 CPEB3Q8NE35 698 aaKnown RBP4.63□□□□□ -1.67
SMG1-207ENST00000563235 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.63□□□□□ -1.67
SMG1-207ENST00000563235 NCOA7Q8NI08 942 aa4.63□□□□□ -1.67
SMG1-207ENST00000563235 TBC1D15Q8TC07 691 aa4.63□□□□□ -1.67
SMG1-207ENST00000563235 CYB5D2Q8WUJ1 264 aa4.63□□□□□ -1.67
SMG1-207ENST00000563235 LPGAT1Q92604 370 aa4.63□□□□□ -1.67
SMG1-207ENST00000563235 ERLEC1Q96DZ1 483 aa4.63□□□□□ -1.67
SMG1-207ENST00000563235 PLEKHA8Q96JA3 519 aa4.63□□□□□ -1.67
SMG1-207ENST00000563235 MRPL1Q9BYD6 325 aaKnown RBP4.63□□□□□ -1.67
SMG1-207ENST00000563235 WWP1Q9H0M0 922 aa4.63□□□□□ -1.67
SMG1-207ENST00000563235 OR52A5Q9H2C5 316 aa4.63□□□□□ -1.67
SMG1-207ENST00000563235 PDZD7Q9H5P4 517 aa4.63□□□□□ -1.67
SMG1-207ENST00000563235 SRD5A3Q9H8P0 318 aa4.63□□□□□ -1.67
SMG1-207ENST00000563235 CHST7Q9NS84 486 aa4.63□□□□□ -1.67
SMG1-207ENST00000563235 PTTG3PQ9NZH4 202 aa4.63□□□□□ -1.67
SMG1-207ENST00000563235 DAPK2Q9UIK4 370 aa4.63□□□□□ -1.67
SMG1-207ENST00000563235 NAGKQ9UJ70 344 aa4.63□□□□□ -1.67
SMG1-207ENST00000563235 EXOGQ9Y2C4 368 aaKnown RBP4.63□□□□□ -1.67
SMG1-207ENST00000563235 SALL1Q9NSC2 1324 aa4.63□□□□□ -1.67
SMG1-207ENST00000563235 TUBGCP6Q96RT7 1819 aa4.63□□□□□ -1.67
SMG1-207ENST00000563235 YTHDC2Q9H6S0 1430 aaKnown RBP4.63□□□□□ -1.67
SMG1-207ENST00000563235 A0A1W2PRG0 241 aa4.62□□□□□ -1.67
SMG1-207ENST00000563235 GOLGA6L9A6NEM1 432 aa4.62□□□□□ -1.67
SMG1-207ENST00000563235 TMEM191CA6NGB0 347 aa4.62□□□□□ -1.67
SMG1-207ENST00000563235 AGAP5A6NIR3 686 aa4.62□□□□□ -1.67
SMG1-207ENST00000563235 SLC38A8A6NNN8 435 aa4.62□□□□□ -1.67
SMG1-207ENST00000563235 WNT10BO00744 389 aa4.62□□□□□ -1.67
SMG1-207ENST00000563235 PPIP5K2O43314 1243 aa4.62□□□□□ -1.67
SMG1-207ENST00000563235 TM7SF2O76062 418 aa4.62□□□□□ -1.67
SMG1-207ENST00000563235 ZWINTO95229 277 aa4.62□□□□□ -1.67
SMG1-207ENST00000563235 SERPINA6P08185 405 aa4.62□□□□□ -1.67
SMG1-207ENST00000563235 CTXN2P0C2S0 81 aa4.62□□□□□ -1.67
SMG1-207ENST00000563235 TMEM191BP0C7N4 346 aa4.62□□□□□ -1.67
SMG1-207ENST00000563235 PLA2G4BP0C869 781 aa4.62□□□□□ -1.67
SMG1-207ENST00000563235 ZNF26P17031 533 aaPredicted RBP4.62□□□□□ -1.67
SMG1-207ENST00000563235 CTPS1P17812 591 aa4.62□□□□□ -1.67
SMG1-207ENST00000563235 EIF2S2P20042 333 aaKnown RBP4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms