RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 SLC25A23Q9BV35 468 aa17.44■□□□□ 0.38
COMMD4-208ENST00000563220 MMADHCQ9H3L0 296 aaPredicted RBP17.44■□□□□ 0.38
COMMD4-208ENST00000563220 SLC52A3Q9NQ40 469 aa17.44■□□□□ 0.38
COMMD4-208ENST00000563220 MUTYHQ9UIF7 546 aa17.44■□□□□ 0.38
COMMD4-208ENST00000563220 SEC22BO75396 215 aa17.44■□□□□ 0.38
COMMD4-208ENST00000563220 DCNP07585 359 aaKnown RBP17.44■□□□□ 0.38
COMMD4-208ENST00000563220 C1GALT1C1LP0DN25 315 aa17.44■□□□□ 0.38
COMMD4-208ENST00000563220 CCND1P24385 295 aa17.44■□□□□ 0.38
COMMD4-208ENST00000563220 IL12AP29459 219 aa17.44■□□□□ 0.38
COMMD4-208ENST00000563220 HSD17B2P37059 387 aa17.44■□□□□ 0.38
COMMD4-208ENST00000563220 STX5Q13190 355 aa17.44■□□□□ 0.38
COMMD4-208ENST00000563220 SMU1Q2TAY7 513 aa17.44■□□□□ 0.38
COMMD4-208ENST00000563220 PRAMEF14Q5SWL7 426 aa17.44■□□□□ 0.38
COMMD4-208ENST00000563220 THEMIS2Q5TEJ8 643 aa17.44■□□□□ 0.38
COMMD4-208ENST00000563220 PRAMEF13Q5VWM6 474 aa17.44■□□□□ 0.38
COMMD4-208ENST00000563220 ADNP2Q6IQ32 1131 aa17.44■□□□□ 0.38
COMMD4-208ENST00000563220 LCTLQ6UWM7 567 aa17.44■□□□□ 0.38
COMMD4-208ENST00000563220 ABRAXAS1Q6UWZ7 409 aa17.44■□□□□ 0.38
COMMD4-208ENST00000563220 SLC5A11Q8WWX8 675 aa17.44■□□□□ 0.38
COMMD4-208ENST00000563220 WDR34Q96EX3 536 aa17.44■□□□□ 0.38
COMMD4-208ENST00000563220 C1orf109Q9NX04 203 aa17.44■□□□□ 0.38
COMMD4-208ENST00000563220 NOP53Q9NZM5 478 aaKnown RBP17.44■□□□□ 0.38
COMMD4-208ENST00000563220 SPATA7Q9P0W8 599 aa17.44■□□□□ 0.38
COMMD4-208ENST00000563220 POLR3HQ9Y535 204 aaPredicted RBP17.44■□□□□ 0.38
COMMD4-208ENST00000563220 A0A1W2PPV9 198 aa17.43■□□□□ 0.38
COMMD4-208ENST00000563220 NRP2O60462 931 aa17.43■□□□□ 0.38
COMMD4-208ENST00000563220 SLC22A3O75751 556 aa17.43■□□□□ 0.38
COMMD4-208ENST00000563220 CAPN3P20807 821 aa17.43■□□□□ 0.38
COMMD4-208ENST00000563220 RAP1GDS1P52306 607 aa17.43■□□□□ 0.38
COMMD4-208ENST00000563220 LRP8Q14114 963 aa17.43■□□□□ 0.38
COMMD4-208ENST00000563220 VPS26BQ4G0F5 336 aa17.43■□□□□ 0.38
COMMD4-208ENST00000563220 ATG9BQ674R7 924 aa17.43■□□□□ 0.38
COMMD4-208ENST00000563220 REP15Q6BDI9 236 aa17.43■□□□□ 0.38
COMMD4-208ENST00000563220 BLOC1S3Q6QNY0 202 aa17.43■□□□□ 0.38
COMMD4-208ENST00000563220 CYP20A1Q6UW02 462 aa17.43■□□□□ 0.38
COMMD4-208ENST00000563220 NXPE4Q6UWF7 544 aa17.43■□□□□ 0.38
COMMD4-208ENST00000563220 ZFAND4Q86XD8 727 aa17.43■□□□□ 0.38
COMMD4-208ENST00000563220 NRROSQ86YC3 692 aa17.43■□□□□ 0.38
COMMD4-208ENST00000563220 SCUBE1Q8IWY4 988 aa17.43■□□□□ 0.38
COMMD4-208ENST00000563220 ULK2Q8IYT8 1036 aa17.43■□□□□ 0.38
COMMD4-208ENST00000563220 LINC01555Q8NAE3 123 aa17.43■□□□□ 0.38
COMMD4-208ENST00000563220 OR7G3Q8NG95 312 aa17.43■□□□□ 0.38
COMMD4-208ENST00000563220 PROKR1Q8TCW9 393 aa17.43■□□□□ 0.38
COMMD4-208ENST00000563220 MTERF1Q99551 399 aaKnown RBP17.43■□□□□ 0.38
COMMD4-208ENST00000563220 ACAT2Q9BWD1 397 aa17.43■□□□□ 0.38
COMMD4-208ENST00000563220 MRPL1Q9BYD6 325 aaKnown RBP17.43■□□□□ 0.38
COMMD4-208ENST00000563220 ACTL8Q9H568 366 aa17.43■□□□□ 0.38
COMMD4-208ENST00000563220 XKR8Q9H6D3 395 aa17.43■□□□□ 0.38
COMMD4-208ENST00000563220 GPR27Q9NS67 375 aa17.43■□□□□ 0.38
COMMD4-208ENST00000563220 ZIM2Q9NZV7 527 aa17.43■□□□□ 0.38
COMMD4-208ENST00000563220 THEGQ9P2T0 379 aa17.43■□□□□ 0.38
COMMD4-208ENST00000563220 KLF15Q9UIH9 416 aa17.43■□□□□ 0.38
COMMD4-208ENST00000563220 NR5A2O00482 541 aa17.42■□□□□ 0.38
COMMD4-208ENST00000563220 ANKRD28O15084 1053 aa17.42■□□□□ 0.38
COMMD4-208ENST00000563220 RSL1D1O76021 490 aaKnown RBP17.42■□□□□ 0.38
COMMD4-208ENST00000563220 THEGLP0DJG4 465 aa17.42■□□□□ 0.38
COMMD4-208ENST00000563220 MTHFD1P11586 935 aaKnown RBP17.42■□□□□ 0.38
COMMD4-208ENST00000563220 NUDT1P36639 197 aa17.42■□□□□ 0.38
COMMD4-208ENST00000563220 ACTR1BP42025 376 aa17.42■□□□□ 0.38
COMMD4-208ENST00000563220 ACTR1AP61163 376 aa17.42■□□□□ 0.38
COMMD4-208ENST00000563220 EIF2B5Q13144 721 aaKnown RBP17.42■□□□□ 0.38
COMMD4-208ENST00000563220 ART3Q13508 389 aa17.42■□□□□ 0.38
COMMD4-208ENST00000563220 SLC30A9Q6PML9 568 aa17.42■□□□□ 0.38
COMMD4-208ENST00000563220 WASH2PQ6VEQ5 465 aa17.42■□□□□ 0.38
COMMD4-208ENST00000563220 RETREG3Q86VR2 466 aa17.42■□□□□ 0.38
COMMD4-208ENST00000563220 GJD3Q8N144 294 aa17.42■□□□□ 0.38
COMMD4-208ENST00000563220 ARHGAP24Q8N264 748 aa17.42■□□□□ 0.38
COMMD4-208ENST00000563220 EFCAB3Q8N7B9 438 aa17.42■□□□□ 0.38
COMMD4-208ENST00000563220 NUDT8Q8WV74 236 aa17.42■□□□□ 0.38
COMMD4-208ENST00000563220 SMPDL3AQ92484 453 aa17.42■□□□□ 0.38
COMMD4-208ENST00000563220 APIPQ96GX9 242 aa17.42■□□□□ 0.38
COMMD4-208ENST00000563220 SLC6A18Q96N87 628 aa17.42■□□□□ 0.38
COMMD4-208ENST00000563220 SPNS1Q9H2V7 528 aa17.42■□□□□ 0.38
COMMD4-208ENST00000563220 TCEAL2Q9H3H9 227 aaPredicted RBP17.42■□□□□ 0.38
COMMD4-208ENST00000563220 DENND2DQ9H6A0 471 aaPredicted RBP17.42■□□□□ 0.38
COMMD4-208ENST00000563220 MVB12BQ9H7P6 319 aa17.42■□□□□ 0.38
COMMD4-208ENST00000563220 CD320Q9NPF0 282 aa17.42■□□□□ 0.38
COMMD4-208ENST00000563220 WASH6PQ9NQA3 447 aa17.42■□□□□ 0.38
COMMD4-208ENST00000563220 GEMIN8Q9NWZ8 242 aaKnown RBP17.42■□□□□ 0.38
COMMD4-208ENST00000563220 TRNAU1APQ9NX07 287 aaKnown RBP17.42■□□□□ 0.38
COMMD4-208ENST00000563220 SIT1Q9Y3P8 196 aa17.42■□□□□ 0.38
COMMD4-208ENST00000563220 PCDHGA11Q9Y5H2 935 aa17.42■□□□□ 0.38
COMMD4-208ENST00000563220 DGKBQ9Y6T7 804 aa17.42■□□□□ 0.38
COMMD4-208ENST00000563220 METTL12A8MUP2 240 aa17.41■□□□□ 0.38
COMMD4-208ENST00000563220 NPIPB8E9PQR5 432 aa17.41■□□□□ 0.38
COMMD4-208ENST00000563220 PRPH2P23942 346 aa17.41■□□□□ 0.38
COMMD4-208ENST00000563220 RPS9P46781 194 aaKnown RBP17.41■□□□□ 0.38
COMMD4-208ENST00000563220 MEF2AQ02078 507 aaPredicted RBP17.41■□□□□ 0.38
COMMD4-208ENST00000563220 ZNF33BQ06732 778 aa17.41■□□□□ 0.38
COMMD4-208ENST00000563220 TBL3Q12788 808 aaKnown RBP17.41■□□□□ 0.38
COMMD4-208ENST00000563220 DDX39BQ13838 428 aaKnown RBP17.41■□□□□ 0.38
COMMD4-208ENST00000563220 SLBPQ14493 270 aaKnown RBP eCLIP17.41■□□□□ 0.38
COMMD4-208ENST00000563220 KRT33BQ14525 404 aa17.41■□□□□ 0.38
COMMD4-208ENST00000563220 MMEL1Q495T6 779 aa17.41■□□□□ 0.38
COMMD4-208ENST00000563220 ZNF542PQ5EBM4 170 aa17.41■□□□□ 0.38
COMMD4-208ENST00000563220 CAMKK1Q8N5S9 505 aa17.41■□□□□ 0.38
COMMD4-208ENST00000563220 OR52E1Q8NGJ3 308 aa17.41■□□□□ 0.38
COMMD4-208ENST00000563220 EHD1Q9H4M9 534 aa17.41■□□□□ 0.38
COMMD4-208ENST00000563220 YY1AP1Q9H869 796 aa17.41■□□□□ 0.38
COMMD4-208ENST00000563220 SPATA6Q9NWH7 488 aaPredicted RBP17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms