RNA–Protein interactions for RNA: ENST00000562806.1

CHD9-207, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 400 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-207ENST00000562806 PSMA3P25788 255 aa2.55□□□□□ -2
CHD9-207ENST00000562806 PTPN3P26045 913 aa2.55□□□□□ -2
CHD9-207ENST00000562806 CETN2P41208 172 aa2.55□□□□□ -2
CHD9-207ENST00000562806 GSCP56915 257 aaPredicted RBP2.55□□□□□ -2
CHD9-207ENST00000562806 SP3Q02447 781 aa2.55□□□□□ -2
CHD9-207ENST00000562806 GUCY2DQ02846 1103 aa2.55□□□□□ -2
CHD9-207ENST00000562806 RBPJQ06330 500 aa2.55□□□□□ -2
CHD9-207ENST00000562806 ZNF415Q09FC8 603 aa2.55□□□□□ -2
CHD9-207ENST00000562806 IL16Q14005 1332 aa2.55□□□□□ -2
CHD9-207ENST00000562806 EFTUD2Q15029 972 aaKnown RBP eCLIP2.55□□□□□ -2
CHD9-207ENST00000562806 HERC3Q15034 1050 aa2.55□□□□□ -2
CHD9-207ENST00000562806 NPTX1Q15818 432 aa2.55□□□□□ -2
CHD9-207ENST00000562806 KLHL26Q53HC5 615 aa2.55□□□□□ -2
CHD9-207ENST00000562806 FASTKD1Q53R41 847 aaKnown RBP2.55□□□□□ -2
CHD9-207ENST00000562806 SPOUT1Q5T280 376 aaKnown RBP2.55□□□□□ -2
CHD9-207ENST00000562806 TMEM207Q6UWW9 146 aa2.55□□□□□ -2
CHD9-207ENST00000562806 RBPMS2Q6ZRY4 209 aaKnown RBP2.55□□□□□ -2
CHD9-207ENST00000562806 ZBTB49Q6ZSB9 765 aa2.55□□□□□ -2
CHD9-207ENST00000562806 KRTAP7-1Q8IUC3 87 aa2.55□□□□□ -2
CHD9-207ENST00000562806 IGSF1Q8N6C5 1336 aa2.55□□□□□ -2
CHD9-207ENST00000562806 RASGEF1AQ8N9B8 481 aa2.55□□□□□ -2
CHD9-207ENST00000562806 XXYLT1Q8NBI6 393 aa2.55□□□□□ -2
CHD9-207ENST00000562806 OR1L3Q8NH93 324 aa2.55□□□□□ -2
CHD9-207ENST00000562806 VANGL1Q8TAA9 524 aaPredicted RBP2.55□□□□□ -2
CHD9-207ENST00000562806 OLIG1Q8TAK6 271 aa2.55□□□□□ -2
CHD9-207ENST00000562806 GATAD1Q8WUU5 269 aa2.55□□□□□ -2
CHD9-207ENST00000562806 FAM20AQ96MK3 541 aa2.55□□□□□ -2
CHD9-207ENST00000562806 MED20Q9H944 212 aa2.55□□□□□ -2
CHD9-207ENST00000562806 MYNNQ9NPC7 610 aa2.55□□□□□ -2
CHD9-207ENST00000562806 MAN2C1Q9NTJ4 1040 aa2.55□□□□□ -2
CHD9-207ENST00000562806 TMEM181Q9P2C4 612 aa2.55□□□□□ -2
CHD9-207ENST00000562806 PPP1R3CQ9UQK1 317 aa2.55□□□□□ -2
CHD9-207ENST00000562806 SELENOKQ9Y6D0 94 aa2.55□□□□□ -2
CHD9-207ENST00000562806 IQCMA0A1B0GVH7 501 aa2.54□□□□□ -2
CHD9-207ENST00000562806 PALM2-AKAP2B1ALY0 433 aaPredicted RBP2.54□□□□□ -2
CHD9-207ENST00000562806 TEX28O15482 410 aa2.54□□□□□ -2
CHD9-207ENST00000562806 LUC7L3O95232 432 aaKnown RBP2.54□□□□□ -2
CHD9-207ENST00000562806 CSN3P07498 182 aa2.54□□□□□ -2
CHD9-207ENST00000562806 CCDC175P0C221 793 aa2.54□□□□□ -2
CHD9-207ENST00000562806 MPZP25189 248 aa2.54□□□□□ -2
CHD9-207ENST00000562806 TMEM50BP56557 158 aa2.54□□□□□ -2
CHD9-207ENST00000562806 SLC8A3P57103 927 aa2.54□□□□□ -2
CHD9-207ENST00000562806 DLK1P80370 383 aa2.54□□□□□ -2
CHD9-207ENST00000562806 ILF2Q12905 390 aaKnown RBP2.54□□□□□ -2
CHD9-207ENST00000562806 ELAVL2Q12926 359 aaKnown RBP2.54□□□□□ -2
CHD9-207ENST00000562806 TRAP1Q12931 704 aaKnown RBP2.54□□□□□ -2
CHD9-207ENST00000562806 VEZF1Q14119 521 aa2.54□□□□□ -2
CHD9-207ENST00000562806 FASTKD3Q14CZ7 662 aaKnown RBP2.54□□□□□ -2
CHD9-207ENST00000562806 ZNF74Q16587 644 aa2.54□□□□□ -2
CHD9-207ENST00000562806 SLC30A6Q6NXT4 461 aa2.54□□□□□ -2
CHD9-207ENST00000562806 CCDC186Q7Z3E2 898 aa2.54□□□□□ -2
CHD9-207ENST00000562806 MMD2Q8IY49 270 aa2.54□□□□□ -2
CHD9-207ENST00000562806 DCLK2Q8N568 766 aa2.54□□□□□ -2
CHD9-207ENST00000562806 NUP37Q8NFH4 326 aa2.54□□□□□ -2
CHD9-207ENST00000562806 OR7A2PQ8NGA2 310 aa2.54□□□□□ -2
CHD9-207ENST00000562806 GTF3AQ92664 365 aaKnown RBP2.54□□□□□ -2
CHD9-207ENST00000562806 PROX1Q92786 737 aa2.54□□□□□ -2
CHD9-207ENST00000562806 AZIN2Q96A70 460 aa2.54□□□□□ -2
CHD9-207ENST00000562806 PGAP3Q96FM1 320 aaPredicted RBP2.54□□□□□ -2
CHD9-207ENST00000562806 PGM2Q96G03 612 aa2.54□□□□□ -2
CHD9-207ENST00000562806 FAM71F1Q96KD3 344 aaPredicted RBP2.54□□□□□ -2
CHD9-207ENST00000562806 C4orf45Q96LM5 186 aa2.54□□□□□ -2
CHD9-207ENST00000562806 MUS81Q96NY9 551 aa2.54□□□□□ -2
CHD9-207ENST00000562806 MAP3K3Q99759 626 aa2.54□□□□□ -2
CHD9-207ENST00000562806 CPNE1Q99829 537 aa2.54□□□□□ -2
CHD9-207ENST00000562806 SLC25A23Q9BV35 468 aa2.54□□□□□ -2
CHD9-207ENST00000562806 DGCR6LQ9BY27 220 aa2.54□□□□□ -2
CHD9-207ENST00000562806 NYXQ9GZU5 481 aa2.54□□□□□ -2
CHD9-207ENST00000562806 TLE6Q9H808 572 aa2.54□□□□□ -2
CHD9-207ENST00000562806 Q9H8V8 135 aa2.54□□□□□ -2
CHD9-207ENST00000562806 MTHFD2LQ9H903 347 aaPredicted RBP2.54□□□□□ -2
CHD9-207ENST00000562806 PANK3Q9H999 370 aa2.54□□□□□ -2
CHD9-207ENST00000562806 PFDN4Q9NQP4 134 aa2.54□□□□□ -2
CHD9-207ENST00000562806 ANKEF1Q9NU02 776 aa2.54□□□□□ -2
CHD9-207ENST00000562806 ELF5Q9UKW6 265 aaPredicted RBP2.54□□□□□ -2
CHD9-207ENST00000562806 TMED3Q9Y3Q3 217 aa2.54□□□□□ -2
CHD9-207ENST00000562806 IGKV3D-20A0A0C4DH25 116 aa2.53□□□□□ -2
CHD9-207ENST00000562806 A0A1W2PPM1 405 aa2.53□□□□□ -2
CHD9-207ENST00000562806 C2CD4DB7Z1M9 353 aa2.53□□□□□ -2
CHD9-207ENST00000562806 E9PQ18 207 aa2.53□□□□□ -2
CHD9-207ENST00000562806 FIBPO43427 364 aa2.53□□□□□ -2
CHD9-207ENST00000562806 CEACAM4O75871 244 aa2.53□□□□□ -2
CHD9-207ENST00000562806 ADRB2P07550 413 aa2.53□□□□□ -2
CHD9-207ENST00000562806 ACHEP22303 614 aa2.53□□□□□ -2
CHD9-207ENST00000562806 LHCGRP22888 699 aa2.53□□□□□ -2
CHD9-207ENST00000562806 HNF4AP41235 474 aa2.53□□□□□ -2
CHD9-207ENST00000562806 LEPRP48357 1165 aaKnown RBP2.53□□□□□ -2
CHD9-207ENST00000562806 HNRNPKP61978 463 aaKnown RBP eCLIP2.53□□□□□ -2
CHD9-207ENST00000562806 POLR2LP62875 67 aaKnown RBP2.53□□□□□ -2
CHD9-207ENST00000562806 TRIM29Q14134 588 aa2.53□□□□□ -2
CHD9-207ENST00000562806 SQLEQ14534 574 aa2.53□□□□□ -2
CHD9-207ENST00000562806 TAB1Q15750 504 aa2.53□□□□□ -2
CHD9-207ENST00000562806 KYNUQ16719 465 aa2.53□□□□□ -2
CHD9-207ENST00000562806 UGP2Q16851 508 aa2.53□□□□□ -2
CHD9-207ENST00000562806 FAM174BQ3ZCQ3 159 aa2.53□□□□□ -2
CHD9-207ENST00000562806 C2CD6Q53TS8 623 aa2.53□□□□□ -2
CHD9-207ENST00000562806 FGD3Q5JSP0 725 aa2.53□□□□□ -2
CHD9-207ENST00000562806 CLEC4GQ6UXB4 293 aa2.53□□□□□ -2
CHD9-207ENST00000562806 FCRLAQ7L513 359 aa2.53□□□□□ -2
CHD9-207ENST00000562806 CHMP1BQ7LBR1 199 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms