RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 SLC39A8Q9C0K1 460 aa13.67□□□□□ -0.22
GTF3C1-203ENST00000562609 TUBB1Q9H4B7 451 aa13.67□□□□□ -0.22
GTF3C1-203ENST00000562609 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.67□□□□□ -0.22
GTF3C1-203ENST00000562609 NEU3Q9UQ49 428 aa13.67□□□□□ -0.22
GTF3C1-203ENST00000562609 PKP3Q9Y446 797 aa13.67□□□□□ -0.22
GTF3C1-203ENST00000562609 GMPPBQ9Y5P6 360 aa13.67□□□□□ -0.22
GTF3C1-203ENST00000562609 A0A0B4J293 547 aa13.66□□□□□ -0.22
GTF3C1-203ENST00000562609 SERPINI2O75830 405 aa13.66□□□□□ -0.22
GTF3C1-203ENST00000562609 ITGAMP11215 1152 aa13.66□□□□□ -0.22
GTF3C1-203ENST00000562609 CPB1P15086 417 aa13.66□□□□□ -0.22
GTF3C1-203ENST00000562609 ZNF30P17039 623 aa13.66□□□□□ -0.22
GTF3C1-203ENST00000562609 GGT1P19440 569 aa13.66□□□□□ -0.22
GTF3C1-203ENST00000562609 CCR1P32246 355 aa13.66□□□□□ -0.22
GTF3C1-203ENST00000562609 TNFSF8P32971 234 aa13.66□□□□□ -0.22
GTF3C1-203ENST00000562609 PIK3CBP42338 1070 aa13.66□□□□□ -0.22
GTF3C1-203ENST00000562609 SLC1A2P43004 574 aa13.66□□□□□ -0.22
GTF3C1-203ENST00000562609 ATN1P54259 1190 aaPredicted RBP13.66□□□□□ -0.22
GTF3C1-203ENST00000562609 SRP54P61011 504 aaKnown RBP13.66□□□□□ -0.22
GTF3C1-203ENST00000562609 SMARCB1Q12824 385 aa13.66□□□□□ -0.22
GTF3C1-203ENST00000562609 LAPTM4AQ15012 233 aa13.66□□□□□ -0.22
GTF3C1-203ENST00000562609 RFX4Q33E94 735 aa13.66□□□□□ -0.22
GTF3C1-203ENST00000562609 KCTD11Q693B1 232 aa13.66□□□□□ -0.22
GTF3C1-203ENST00000562609 NECAB2Q7Z6G3 386 aa13.66□□□□□ -0.22
GTF3C1-203ENST00000562609 TMEM173Q86WV6 379 aaPredicted RBP13.66□□□□□ -0.22
GTF3C1-203ENST00000562609 PNPLA1Q8N8W4 532 aa13.66□□□□□ -0.22
GTF3C1-203ENST00000562609 OR8H1Q8NGG4 311 aa13.66□□□□□ -0.22
GTF3C1-203ENST00000562609 UBE2FQ969M7 185 aa13.66□□□□□ -0.22
GTF3C1-203ENST00000562609 RNF31Q96EP0 1072 aa13.66□□□□□ -0.22
GTF3C1-203ENST00000562609 TEKT5Q96M29 485 aa13.66□□□□□ -0.22
GTF3C1-203ENST00000562609 UROC1Q96N76 676 aa13.66□□□□□ -0.22
GTF3C1-203ENST00000562609 CRISPLD1Q9H336 500 aa13.66□□□□□ -0.22
GTF3C1-203ENST00000562609 EVA1BQ9NVM1 165 aa13.66□□□□□ -0.22
GTF3C1-203ENST00000562609 SMPD4Q9NXE4 827 aa13.66□□□□□ -0.22
GTF3C1-203ENST00000562609 PCDHB8Q9UN66 801 aa13.66□□□□□ -0.22
GTF3C1-203ENST00000562609 CIB4A0PJX0 185 aa13.66□□□□□ -0.22
GTF3C1-203ENST00000562609 AZIN1O14977 448 aa13.66□□□□□ -0.22
GTF3C1-203ENST00000562609 STX7O15400 261 aaKnown RBP13.66□□□□□ -0.22
GTF3C1-203ENST00000562609 NBNO60934 754 aa13.66□□□□□ -0.22
GTF3C1-203ENST00000562609 CDK14O94921 469 aa13.66□□□□□ -0.22
GTF3C1-203ENST00000562609 IGLV3-25P01717 112 aa13.66□□□□□ -0.22
GTF3C1-203ENST00000562609 SOX6P35712 828 aa13.66□□□□□ -0.22
GTF3C1-203ENST00000562609 PLIN5Q00G26 463 aa13.66□□□□□ -0.22
GTF3C1-203ENST00000562609 EFEMP1Q12805 493 aa13.66□□□□□ -0.22
GTF3C1-203ENST00000562609 PTCHD3Q3KNS1 767 aa13.66□□□□□ -0.22
GTF3C1-203ENST00000562609 CTXN3Q4LDR2 81 aa13.66□□□□□ -0.22
GTF3C1-203ENST00000562609 SHEQ5VZ18 495 aa13.66□□□□□ -0.22
GTF3C1-203ENST00000562609 XKRXQ6PP77 449 aa13.66□□□□□ -0.22
GTF3C1-203ENST00000562609 ARHGAP12Q8IWW6 846 aa13.66□□□□□ -0.22
GTF3C1-203ENST00000562609 ADHFE1Q8IWW8 467 aa13.66□□□□□ -0.22
GTF3C1-203ENST00000562609 IPMKQ8NFU5 416 aa13.66□□□□□ -0.22
GTF3C1-203ENST00000562609 OR10Z1Q8NGY1 313 aa13.66□□□□□ -0.22
GTF3C1-203ENST00000562609 ALG9Q9H6U8 611 aa13.66□□□□□ -0.22
GTF3C1-203ENST00000562609 TRAPPC4Q9Y296 219 aa13.66□□□□□ -0.22
GTF3C1-203ENST00000562609 A0A1W2PQ09 198 aa13.65□□□□□ -0.22
GTF3C1-203ENST00000562609 SMLR1H3BR10 107 aa13.65□□□□□ -0.22
GTF3C1-203ENST00000562609 GSTA4O15217 222 aa13.65□□□□□ -0.22
GTF3C1-203ENST00000562609 RGS5O15539 181 aa13.65□□□□□ -0.22
GTF3C1-203ENST00000562609 CSF2P04141 144 aa13.65□□□□□ -0.22
GTF3C1-203ENST00000562609 RPLP2P05387 115 aaKnown RBP13.65□□□□□ -0.22
GTF3C1-203ENST00000562609 LTA4HP09960 611 aaKnown RBP13.65□□□□□ -0.22
GTF3C1-203ENST00000562609 TYMPP19971 482 aa13.65□□□□□ -0.22
GTF3C1-203ENST00000562609 ZFP36L2P47974 494 aaKnown RBP13.65□□□□□ -0.22
GTF3C1-203ENST00000562609 KCNC1P48547 511 aa13.65□□□□□ -0.22
GTF3C1-203ENST00000562609 POLR2JP52435 117 aaKnown RBP13.65□□□□□ -0.22
GTF3C1-203ENST00000562609 TCTN1Q2MV58 587 aa13.65□□□□□ -0.22
GTF3C1-203ENST00000562609 ZC3H12BQ5HYM0 836 aaKnown RBP13.65□□□□□ -0.22
GTF3C1-203ENST00000562609 LAMTOR1Q6IAA8 161 aa13.65□□□□□ -0.22
GTF3C1-203ENST00000562609 LETMD1Q6P1Q0 360 aa13.65□□□□□ -0.22
GTF3C1-203ENST00000562609 RSPO2Q6UXX9 243 aaPredicted RBP13.65□□□□□ -0.22
GTF3C1-203ENST00000562609 CYP4Z1Q86W10 505 aa13.65□□□□□ -0.22
GTF3C1-203ENST00000562609 CYP4Z2PQ8N1L4 340 aa13.65□□□□□ -0.22
GTF3C1-203ENST00000562609 TSPEARQ8WU66 669 aa13.65□□□□□ -0.22
GTF3C1-203ENST00000562609 ADGRE2Q9UHX3 823 aa13.65□□□□□ -0.22
GTF3C1-203ENST00000562609 ATP6V1HQ9UI12 483 aa13.65□□□□□ -0.22
GTF3C1-203ENST00000562609 HS3ST4Q9Y661 456 aa13.65□□□□□ -0.22
GTF3C1-203ENST00000562609 VWA8A3KMH1 1905 aa13.65□□□□□ -0.22
GTF3C1-203ENST00000562609 A0A096LPI6 279 aa13.65□□□□□ -0.22
GTF3C1-203ENST00000562609 NCAM2O15394 837 aa13.65□□□□□ -0.22
GTF3C1-203ENST00000562609 PMPCBO75439 489 aa13.65□□□□□ -0.22
GTF3C1-203ENST00000562609 SLC22A3O75751 556 aa13.65□□□□□ -0.22
GTF3C1-203ENST00000562609 EOMESO95936 686 aa13.65□□□□□ -0.22
GTF3C1-203ENST00000562609 C21orf33P30042 268 aaPredicted RBP13.65□□□□□ -0.22
GTF3C1-203ENST00000562609 TIE1P35590 1138 aa13.65□□□□□ -0.22
GTF3C1-203ENST00000562609 FOXD4Q12950 439 aaPredicted RBP13.65□□□□□ -0.22
GTF3C1-203ENST00000562609 EIF4EBP2Q13542 120 aaPredicted RBP13.65□□□□□ -0.22
GTF3C1-203ENST00000562609 GPNMBQ14956 572 aa13.65□□□□□ -0.22
GTF3C1-203ENST00000562609 HABP4Q5JVS0 413 aaKnown RBP13.65□□□□□ -0.22
GTF3C1-203ENST00000562609 CLVS2Q5SYC1 327 aa13.65□□□□□ -0.22
GTF3C1-203ENST00000562609 ATPAF2Q8N5M1 289 aa13.65□□□□□ -0.22
GTF3C1-203ENST00000562609 ISG20Q96AZ6 181 aaKnown RBP13.65□□□□□ -0.22
GTF3C1-203ENST00000562609 TRMT61AQ96FX7 289 aaKnown RBP13.65□□□□□ -0.22
GTF3C1-203ENST00000562609 SCLYQ96I15 445 aa13.65□□□□□ -0.22
GTF3C1-203ENST00000562609 FRMD6Q96NE9 622 aa13.65□□□□□ -0.22
GTF3C1-203ENST00000562609 SEPT5Q99719 369 aaPredicted RBP13.65□□□□□ -0.22
GTF3C1-203ENST00000562609 FAM83DQ9H4H8 585 aa13.65□□□□□ -0.22
GTF3C1-203ENST00000562609 WASH6PQ9NQA3 447 aa13.65□□□□□ -0.22
GTF3C1-203ENST00000562609 MYO16Q9Y6X6 1858 aa13.65□□□□□ -0.22
GTF3C1-203ENST00000562609 CASP8AP2Q9UKL3 1982 aa13.64□□□□□ -0.23
GTF3C1-203ENST00000562609 LRRC14BA6NHZ5 514 aa13.64□□□□□ -0.23
GTF3C1-203ENST00000562609 TLL1O43897 1013 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms