RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 MED27Q6P2C8 311 aa9.96□□□□□ -0.82
USP3-219ENST00000561326 FOXR1Q6PIV2 292 aa9.96□□□□□ -0.82
USP3-219ENST00000561326 SLCO4C1Q6ZQN7 724 aa9.96□□□□□ -0.82
USP3-219ENST00000561326 LARP4Q71RC2 724 aaKnown RBP eCLIP9.96□□□□□ -0.82
USP3-219ENST00000561326 SPATA19Q7Z5L4 167 aa9.96□□□□□ -0.82
USP3-219ENST00000561326 ALYREFQ86V81 257 aaKnown RBP9.96□□□□□ -0.82
USP3-219ENST00000561326 AMIGO1Q86WK6 493 aa9.96□□□□□ -0.82
USP3-219ENST00000561326 SYT12Q8IV01 421 aa9.96□□□□□ -0.82
USP3-219ENST00000561326 LRRC56Q8IYG6 542 aaPredicted RBP9.96□□□□□ -0.82
USP3-219ENST00000561326 KRT78Q8N1N4 520 aa9.96□□□□□ -0.82
USP3-219ENST00000561326 C2orf73Q8N5S3 287 aaPredicted RBP9.96□□□□□ -0.82
USP3-219ENST00000561326 DCBLD1Q8N8Z6 715 aa9.96□□□□□ -0.82
USP3-219ENST00000561326 OR4E2Q8NGC2 313 aa9.96□□□□□ -0.82
USP3-219ENST00000561326 OR52E1Q8NGJ3 308 aa9.96□□□□□ -0.82
USP3-219ENST00000561326 CEP76Q8TAP6 659 aa9.96□□□□□ -0.82
USP3-219ENST00000561326 ZDHHC1Q8WTX9 485 aa9.96□□□□□ -0.82
USP3-219ENST00000561326 SLC5A11Q8WWX8 675 aa9.96□□□□□ -0.82
USP3-219ENST00000561326 NEIL2Q969S2 332 aa9.96□□□□□ -0.82
USP3-219ENST00000561326 IL17FQ96PD4 163 aa9.96□□□□□ -0.82
USP3-219ENST00000561326 OR4K3Q96R72 315 aa9.96□□□□□ -0.82
USP3-219ENST00000561326 OR52B2Q96RD2 323 aa9.96□□□□□ -0.82
USP3-219ENST00000561326 LRRC61Q9BV99 259 aa9.96□□□□□ -0.82
USP3-219ENST00000561326 PITHD1Q9GZP4 211 aaPredicted RBP9.96□□□□□ -0.82
USP3-219ENST00000561326 SRMSQ9H3Y6 488 aa9.96□□□□□ -0.82
USP3-219ENST00000561326 AKTIPQ9H8T0 292 aa9.96□□□□□ -0.82
USP3-219ENST00000561326 SLC40A1Q9NP59 571 aa9.96□□□□□ -0.82
USP3-219ENST00000561326 POT1Q9NUX5 634 aa9.96□□□□□ -0.82
USP3-219ENST00000561326 NMRK1Q9NWW6 199 aa9.96□□□□□ -0.82
USP3-219ENST00000561326 SCHIP1Q9P0W5 487 aaPredicted RBP9.96□□□□□ -0.82
USP3-219ENST00000561326 CPNE7Q9UBL6 633 aa9.96□□□□□ -0.82
USP3-219ENST00000561326 ADGRE2Q9UHX3 823 aa9.96□□□□□ -0.82
USP3-219ENST00000561326 BTRCQ9Y297 605 aa9.96□□□□□ -0.82
USP3-219ENST00000561326 SLCO1B1Q9Y6L6 691 aa9.96□□□□□ -0.82
USP3-219ENST00000561326 A0A1B0GVT2 93 aa9.95□□□□□ -0.82
USP3-219ENST00000561326 ATP6AP2A0A1C7CYW4 349 aa9.95□□□□□ -0.82
USP3-219ENST00000561326 SERTM1A2A2V5 107 aa9.95□□□□□ -0.82
USP3-219ENST00000561326 FAM221BA6H8Z2 402 aa9.95□□□□□ -0.82
USP3-219ENST00000561326 E7EQ34 232 aa9.95□□□□□ -0.82
USP3-219ENST00000561326 LMO7DNF2Z398 122 aa9.95□□□□□ -0.82
USP3-219ENST00000561326 H0YIV9 168 aa9.95□□□□□ -0.82
USP3-219ENST00000561326 SLC22A2O15244 555 aa9.95□□□□□ -0.82
USP3-219ENST00000561326 AQP9O43315 295 aa9.95□□□□□ -0.82
USP3-219ENST00000561326 HNRNPCL1O60812 293 aaKnown RBP9.95□□□□□ -0.82
USP3-219ENST00000561326 ATP6AP2O75787 350 aa9.95□□□□□ -0.82
USP3-219ENST00000561326 EML2O95834 649 aa9.95□□□□□ -0.82
USP3-219ENST00000561326 JUNP05412 331 aaKnown RBP9.95□□□□□ -0.82
USP3-219ENST00000561326 HSD3B1P14060 373 aa9.95□□□□□ -0.82
USP3-219ENST00000561326 HSD3B2P26439 372 aa9.95□□□□□ -0.82
USP3-219ENST00000561326 CMPK1P30085 196 aa9.95□□□□□ -0.82
USP3-219ENST00000561326 CCR8P51685 355 aa9.95□□□□□ -0.82
USP3-219ENST00000561326 MNAT1P51948 309 aa9.95□□□□□ -0.82
USP3-219ENST00000561326 STX1BP61266 288 aa9.95□□□□□ -0.82
USP3-219ENST00000561326 PHEXP78562 749 aa9.95□□□□□ -0.82
USP3-219ENST00000561326 ABATP80404 500 aa9.95□□□□□ -0.82
USP3-219ENST00000561326 PRDX1Q06830 199 aaKnown RBP9.95□□□□□ -0.82
USP3-219ENST00000561326 MAD2L1Q13257 205 aaPredicted RBP9.95□□□□□ -0.82
USP3-219ENST00000561326 KIR2DS3Q14952 304 aa9.95□□□□□ -0.82
USP3-219ENST00000561326 SF1Q15637 639 aaKnown RBP9.95□□□□□ -0.82
USP3-219ENST00000561326 DUOXA1Q1HG43 343 aa9.95□□□□□ -0.82
USP3-219ENST00000561326 ATP6AP1LQ52LC2 224 aa9.95□□□□□ -0.82
USP3-219ENST00000561326 SGO1Q5FBB7 561 aa9.95□□□□□ -0.82
USP3-219ENST00000561326 FRG2Q64ET8 278 aa9.95□□□□□ -0.82
USP3-219ENST00000561326 FAM91A1Q658Y4 838 aa9.95□□□□□ -0.82
USP3-219ENST00000561326 NXPE4Q6UWF7 544 aa9.95□□□□□ -0.82
USP3-219ENST00000561326 LAYNQ6UX15 382 aa9.95□□□□□ -0.82
USP3-219ENST00000561326 TRIM46Q7Z4K8 759 aa9.95□□□□□ -0.82
USP3-219ENST00000561326 TMPRSS11BQ86T26 416 aa9.95□□□□□ -0.82
USP3-219ENST00000561326 PARP9Q8IXQ6 854 aa9.95□□□□□ -0.82
USP3-219ENST00000561326 SFRP1Q8N474 314 aa9.95□□□□□ -0.82
USP3-219ENST00000561326 TBC1D19Q8N5T2 526 aa9.95□□□□□ -0.82
USP3-219ENST00000561326 SELENOMQ8WWX9 145 aa9.95□□□□□ -0.82
USP3-219ENST00000561326 PIGKQ92643 395 aa9.95□□□□□ -0.82
USP3-219ENST00000561326 NELL1Q92832 810 aa9.95□□□□□ -0.82
USP3-219ENST00000561326 MTFMTQ96DP5 389 aaKnown RBP9.95□□□□□ -0.82
USP3-219ENST00000561326 WDR34Q96EX3 536 aa9.95□□□□□ -0.82
USP3-219ENST00000561326 NSL1Q96IY1 281 aa9.95□□□□□ -0.82
USP3-219ENST00000561326 PPP3R2Q96LZ3 170 aa9.95□□□□□ -0.82
USP3-219ENST00000561326 C3orf30Q96M34 536 aa9.95□□□□□ -0.82
USP3-219ENST00000561326 FRG2BQ96QU4 278 aa9.95□□□□□ -0.82
USP3-219ENST00000561326 AIF1LQ9BQI0 150 aa9.95□□□□□ -0.82
USP3-219ENST00000561326 MENTQ9BUN1 341 aa9.95□□□□□ -0.82
USP3-219ENST00000561326 ACAT2Q9BWD1 397 aa9.95□□□□□ -0.82
USP3-219ENST00000561326 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.95□□□□□ -0.82
USP3-219ENST00000561326 NMUR2Q9GZQ4 415 aa9.95□□□□□ -0.82
USP3-219ENST00000561326 MYLK2Q9H1R3 596 aa9.95□□□□□ -0.82
USP3-219ENST00000561326 TUBB1Q9H4B7 451 aa9.95□□□□□ -0.82
USP3-219ENST00000561326 PELI2Q9HAT8 420 aa9.95□□□□□ -0.82
USP3-219ENST00000561326 TXLNGQ9NUQ3 528 aa9.95□□□□□ -0.82
USP3-219ENST00000561326 TAC3Q9UHF0 121 aa9.95□□□□□ -0.82
USP3-219ENST00000561326 PILRBQ9UKJ0 227 aa9.95□□□□□ -0.82
USP3-219ENST00000561326 ICKQ9UPZ9 632 aa9.95□□□□□ -0.82
USP3-219ENST00000561326 CSNK1G3Q9Y6M4 447 aa9.95□□□□□ -0.82
USP3-219ENST00000561326 ATXN2Q99700 1313 aaKnown RBP9.95□□□□□ -0.82
USP3-219ENST00000561326 UNC13CQ8NB66 2214 aa9.95□□□□□ -0.82
USP3-219ENST00000561326 ARID1BQ8NFD5 2236 aaPredicted RBP9.95□□□□□ -0.82
USP3-219ENST00000561326 PIPSLA2A3N6 862 aa9.94□□□□□ -0.82
USP3-219ENST00000561326 ISM1B1AKI9 464 aa9.94□□□□□ -0.82
USP3-219ENST00000561326 YY2O15391 372 aa9.94□□□□□ -0.82
USP3-219ENST00000561326 PEX11AO75192 247 aa9.94□□□□□ -0.82
USP3-219ENST00000561326 PIAS2O75928 621 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms