RNA–Protein interactions for RNA: ENST00000561277.5

TSPAN3-210, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-210ENST00000561277 PHGDHO43175 533 aaKnown RBP19.12■□□□□ 0.65
TSPAN3-210ENST00000561277 CTSVO60911 334 aa19.12■□□□□ 0.65
TSPAN3-210ENST00000561277 KATNA1O75449 491 aa19.12■□□□□ 0.65
TSPAN3-210ENST00000561277 GUCA1CO95843 209 aa19.12■□□□□ 0.65
TSPAN3-210ENST00000561277 ATXN8OSP0DMR3 200 aa19.12■□□□□ 0.65
TSPAN3-210ENST00000561277 TCN2P20062 427 aa19.12■□□□□ 0.65
TSPAN3-210ENST00000561277 PHBP35232 272 aa19.12■□□□□ 0.65
TSPAN3-210ENST00000561277 SPRP35270 261 aaPredicted RBP19.12■□□□□ 0.65
TSPAN3-210ENST00000561277 SLMAPQ14BN4 828 aa19.12■□□□□ 0.65
TSPAN3-210ENST00000561277 ZC3H12BQ5HYM0 836 aaKnown RBP19.12■□□□□ 0.65
TSPAN3-210ENST00000561277 GRTP1Q5TC63 336 aa19.12■□□□□ 0.65
TSPAN3-210ENST00000561277 ICE2Q659A1 982 aa19.12■□□□□ 0.65
TSPAN3-210ENST00000561277 LRRC56Q8IYG6 542 aaPredicted RBP19.12■□□□□ 0.65
TSPAN3-210ENST00000561277 ALKBH8Q96BT7 664 aaKnown RBP19.12■□□□□ 0.65
TSPAN3-210ENST00000561277 PDLIM5Q96HC4 596 aaKnown RBP19.12■□□□□ 0.65
TSPAN3-210ENST00000561277 EFHD1Q9BUP0 239 aa19.12■□□□□ 0.65
TSPAN3-210ENST00000561277 TRIM54Q9BYV2 358 aa19.12■□□□□ 0.65
TSPAN3-210ENST00000561277 UNKQ9C0B0 810 aaKnown RBP19.12■□□□□ 0.65
TSPAN3-210ENST00000561277 TSPYL1Q9H0U9 437 aa19.12■□□□□ 0.65
TSPAN3-210ENST00000561277 ATG10Q9H0Y0 220 aa19.12■□□□□ 0.65
TSPAN3-210ENST00000561277 POPDC3Q9HBV1 291 aa19.12■□□□□ 0.65
TSPAN3-210ENST00000561277 CCDC177Q9NQR7 707 aaPredicted RBP19.12■□□□□ 0.65
TSPAN3-210ENST00000561277 ARL15Q9NXU5 204 aa19.12■□□□□ 0.65
TSPAN3-210ENST00000561277 NFU1Q9UMS0 254 aa19.12■□□□□ 0.65
TSPAN3-210ENST00000561277 ATMQ13315 3056 aa19.12■□□□□ 0.65
TSPAN3-210ENST00000561277 H3BMH7 237 aa19.11■□□□□ 0.65
TSPAN3-210ENST00000561277 CDC7O00311 574 aa19.11■□□□□ 0.65
TSPAN3-210ENST00000561277 CCNDBP1O95273 360 aa19.11■□□□□ 0.65
TSPAN3-210ENST00000561277 ACSL3O95573 720 aa19.11■□□□□ 0.65
TSPAN3-210ENST00000561277 KLK3P07288 261 aaPredicted RBP19.11■□□□□ 0.65
TSPAN3-210ENST00000561277 PRKAR1AP10644 381 aa19.11■□□□□ 0.65
TSPAN3-210ENST00000561277 STMN1P16949 149 aa19.11■□□□□ 0.65
TSPAN3-210ENST00000561277 NAB1Q13506 487 aa19.11■□□□□ 0.65
TSPAN3-210ENST00000561277 PTCHD3Q3KNS1 767 aa19.11■□□□□ 0.65
TSPAN3-210ENST00000561277 AGTRAPQ6RW13 159 aa19.11■□□□□ 0.65
TSPAN3-210ENST00000561277 IFT20Q8IY31 132 aa19.11■□□□□ 0.65
TSPAN3-210ENST00000561277 STARD8Q92502 1023 aa19.11■□□□□ 0.65
TSPAN3-210ENST00000561277 TSPAN17Q96FV3 270 aa19.11■□□□□ 0.65
TSPAN3-210ENST00000561277 SLC45A3Q96JT2 553 aa19.11■□□□□ 0.65
TSPAN3-210ENST00000561277 PCMTD2Q9NV79 361 aa19.11■□□□□ 0.65
TSPAN3-210ENST00000561277 FAM208BQ5VWN6 2430 aa19.11■□□□□ 0.65
TSPAN3-210ENST00000561277 IGKV1-8A0A0C4DH67 115 aa19.1■□□□□ 0.65
TSPAN3-210ENST00000561277 A0A0J9YVX5 310 aa19.1■□□□□ 0.65
TSPAN3-210ENST00000561277 MEN1O00255 615 aa19.1■□□□□ 0.65
TSPAN3-210ENST00000561277 RORAP35398 523 aa19.1■□□□□ 0.65
TSPAN3-210ENST00000561277 PRDX1Q06830 199 aaKnown RBP19.1■□□□□ 0.65
TSPAN3-210ENST00000561277 DNASE1L3Q13609 305 aa19.1■□□□□ 0.65
TSPAN3-210ENST00000561277 NAA25Q14CX7 972 aa19.1■□□□□ 0.65
TSPAN3-210ENST00000561277 UAP1Q16222 522 aaPredicted RBP19.1■□□□□ 0.65
TSPAN3-210ENST00000561277 C1orf189Q5VU69 101 aa19.1■□□□□ 0.65
TSPAN3-210ENST00000561277 SBSNQ6UWP8 590 aa19.1■□□□□ 0.65
TSPAN3-210ENST00000561277 ADCK2Q7Z695 626 aa19.1■□□□□ 0.65
TSPAN3-210ENST00000561277 RELL1Q8IUW5 271 aa19.1■□□□□ 0.65
TSPAN3-210ENST00000561277 DSELQ8IZU8 1212 aa19.1■□□□□ 0.65
TSPAN3-210ENST00000561277 SPATA6LQ8N4H0 392 aa19.1■□□□□ 0.65
TSPAN3-210ENST00000561277 LRFN5Q96NI6 719 aa19.1■□□□□ 0.65
TSPAN3-210ENST00000561277 RUFY1Q96T51 708 aa19.1■□□□□ 0.65
TSPAN3-210ENST00000561277 SELENOSQ9BQE4 189 aa19.1■□□□□ 0.65
TSPAN3-210ENST00000561277 CHST8Q9H2A9 424 aa19.1■□□□□ 0.65
TSPAN3-210ENST00000561277 STARD5Q9NSY2 213 aa19.1■□□□□ 0.65
TSPAN3-210ENST00000561277 KLK4Q9Y5K2 254 aa19.1■□□□□ 0.65
TSPAN3-210ENST00000561277 AP1M2Q9Y6Q5 423 aa19.1■□□□□ 0.65
TSPAN3-210ENST00000561277 ANKRD12Q6UB98 2062 aa19.1■□□□□ 0.65
TSPAN3-210ENST00000561277 OR2A25A4D2G3 310 aa19.1■□□□□ 0.65
TSPAN3-210ENST00000561277 ZNF891A8MT65 544 aaPredicted RBP19.1■□□□□ 0.65
TSPAN3-210ENST00000561277 AP1S2P56377 157 aa19.1■□□□□ 0.65
TSPAN3-210ENST00000561277 VSX2P58304 361 aaPredicted RBP19.1■□□□□ 0.65
TSPAN3-210ENST00000561277 NAE1Q13564 534 aa19.1■□□□□ 0.65
TSPAN3-210ENST00000561277 PRAMEF13Q5VWM6 474 aa19.1■□□□□ 0.65
TSPAN3-210ENST00000561277 FRMPD2BQ6IN97 320 aa19.1■□□□□ 0.65
TSPAN3-210ENST00000561277 LCN10Q6JVE6 187 aa19.1■□□□□ 0.65
TSPAN3-210ENST00000561277 CMC1Q7Z7K0 106 aa19.1■□□□□ 0.65
TSPAN3-210ENST00000561277 CYTH2Q99418 400 aa19.1■□□□□ 0.65
TSPAN3-210ENST00000561277 PLCD4Q9BRC7 762 aa19.1■□□□□ 0.65
TSPAN3-210ENST00000561277 NDC1Q9BTX1 674 aa19.1■□□□□ 0.65
TSPAN3-210ENST00000561277 L2HGDHQ9H9P8 463 aa19.1■□□□□ 0.65
TSPAN3-210ENST00000561277 CUEDC1Q9NWM3 386 aaPredicted RBP19.1■□□□□ 0.65
TSPAN3-210ENST00000561277 DHCR7Q9UBM7 475 aaKnown RBP19.1■□□□□ 0.65
TSPAN3-210ENST00000561277 CTNNAL1Q9UBT7 734 aa19.1■□□□□ 0.65
TSPAN3-210ENST00000561277 TERTO14746 1132 aaKnown RBP19.09■□□□□ 0.65
TSPAN3-210ENST00000561277 NKX2-8O15522 239 aa19.09■□□□□ 0.65
TSPAN3-210ENST00000561277 ENO2P09104 434 aaPredicted RBP19.09■□□□□ 0.65
TSPAN3-210ENST00000561277 HBQ1P09105 142 aa19.09■□□□□ 0.65
TSPAN3-210ENST00000561277 RAB10P61026 200 aa19.09■□□□□ 0.65
TSPAN3-210ENST00000561277 ABATP80404 500 aa19.09■□□□□ 0.65
TSPAN3-210ENST00000561277 TSNQ15631 228 aaKnown RBP19.09■□□□□ 0.65
TSPAN3-210ENST00000561277 PPP1R3AQ16821 1122 aa19.09■□□□□ 0.65
TSPAN3-210ENST00000561277 TLDC1Q6P9B6 456 aa19.09■□□□□ 0.65
TSPAN3-210ENST00000561277 RAPH1Q70E73 1250 aa19.09■□□□□ 0.65
TSPAN3-210ENST00000561277 FRA10AC1Q70Z53 315 aa19.09■□□□□ 0.65
TSPAN3-210ENST00000561277 RNF44Q7L0R7 432 aa19.09■□□□□ 0.65
TSPAN3-210ENST00000561277 PYCR2Q96C36 320 aa19.09■□□□□ 0.65
TSPAN3-210ENST00000561277 TXLNGQ9NUQ3 528 aa19.09■□□□□ 0.65
TSPAN3-210ENST00000561277 KCND3Q9UK17 655 aa19.09■□□□□ 0.65
TSPAN3-210ENST00000561277 PCM1Q15154 2024 aa19.09■□□□□ 0.65
TSPAN3-210ENST00000561277 C21orf140B9A014 251 aa19.08■□□□□ 0.65
TSPAN3-210ENST00000561277 EIF2S1P05198 315 aaKnown RBP19.08■□□□□ 0.65
TSPAN3-210ENST00000561277 CCDC166P0CW27 439 aa19.08■□□□□ 0.65
TSPAN3-210ENST00000561277 RPS18P62269 152 aaKnown RBP19.08■□□□□ 0.65
TSPAN3-210ENST00000561277 BMPR2Q13873 1038 aa19.08■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms