RNA–Protein interactions for RNA: ENST00000560583.5

RPL28-210, Transcript of ribosomal protein L28, humanhuman

TSL 2 BASIC

Gene RPL28, Length 1,204 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-210ENST00000560583 GOLGA6L10A0A0M3HER8 536 aa17.09■□□□□ 0.33
RPL28-210ENST00000560583 OR2A25A4D2G3 310 aa17.09■□□□□ 0.33
RPL28-210ENST00000560583 VSTM2BA6NLU5 285 aa17.09■□□□□ 0.33
RPL28-210ENST00000560583 AP3B1O00203 1094 aa17.09■□□□□ 0.33
RPL28-210ENST00000560583 PGRMC1O00264 195 aaKnown RBP17.09■□□□□ 0.33
RPL28-210ENST00000560583 ESR1P03372 595 aa17.09■□□□□ 0.33
RPL28-210ENST00000560583 OGNP20774 298 aaKnown RBP17.09■□□□□ 0.33
RPL28-210ENST00000560583 ITGA3P26006 1051 aa17.09■□□□□ 0.33
RPL28-210ENST00000560583 MAGEA6P43360 314 aa17.09■□□□□ 0.33
RPL28-210ENST00000560583 VPS41P49754 854 aa17.09■□□□□ 0.33
RPL28-210ENST00000560583 TERF1P54274 439 aa17.09■□□□□ 0.33
RPL28-210ENST00000560583 ADARP55265 1226 aaKnown RBP17.09■□□□□ 0.33
RPL28-210ENST00000560583 CDK16Q00536 496 aa17.09■□□□□ 0.33
RPL28-210ENST00000560583 NR6A1Q15406 480 aa17.09■□□□□ 0.33
RPL28-210ENST00000560583 ACSBG2Q5FVE4 666 aa17.09■□□□□ 0.33
RPL28-210ENST00000560583 WASHC2DQ5SRD0 308 aa17.09■□□□□ 0.33
RPL28-210ENST00000560583 RNF187Q5TA31 235 aaPredicted RBP17.09■□□□□ 0.33
RPL28-210ENST00000560583 PRAMEF13Q5VWM6 474 aa17.09■□□□□ 0.33
RPL28-210ENST00000560583 MRNIPQ6NTE8 343 aa17.09■□□□□ 0.33
RPL28-210ENST00000560583 TTC27Q6P3X3 843 aa17.09■□□□□ 0.33
RPL28-210ENST00000560583 TTC23LQ6PF05 361 aa17.09■□□□□ 0.33
RPL28-210ENST00000560583 CUZD1Q86UP6 607 aa17.09■□□□□ 0.33
RPL28-210ENST00000560583 CAND1Q86VP6 1230 aaKnown RBP17.09■□□□□ 0.33
RPL28-210ENST00000560583 CISD2Q8N5K1 135 aaKnown RBP17.09■□□□□ 0.33
RPL28-210ENST00000560583 MAGOHBQ96A72 148 aaKnown RBP17.09■□□□□ 0.33
RPL28-210ENST00000560583 SLC30A3Q99726 388 aa17.09■□□□□ 0.33
RPL28-210ENST00000560583 CRYL1Q9Y2S2 319 aa17.09■□□□□ 0.33
RPL28-210ENST00000560583 MRFAP1Q9Y605 127 aa17.09■□□□□ 0.33
RPL28-210ENST00000560583 MAU2Q9Y6X3 613 aa17.09■□□□□ 0.33
RPL28-210ENST00000560583 FAM169AQ9Y6X4 670 aa17.09■□□□□ 0.33
RPL28-210ENST00000560583 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.08■□□□□ 0.32
RPL28-210ENST00000560583 IGKV1-8A0A0C4DH67 115 aa17.08■□□□□ 0.32
RPL28-210ENST00000560583 CILP2Q8IUL8 1156 aa17.08■□□□□ 0.32
RPL28-210ENST00000560583 GIMAP7Q8NHV1 300 aa17.08■□□□□ 0.32
RPL28-210ENST00000560583 MS4A14Q96JA4 679 aa17.08■□□□□ 0.32
RPL28-210ENST00000560583 BARD1Q99728 777 aaKnown RBP17.08■□□□□ 0.32
RPL28-210ENST00000560583 ACAT2Q9BWD1 397 aa17.08■□□□□ 0.32
RPL28-210ENST00000560583 ILKAPQ9H0C8 392 aaPredicted RBP17.08■□□□□ 0.32
RPL28-210ENST00000560583 CUEDC1Q9NWM3 386 aaPredicted RBP17.08■□□□□ 0.32
RPL28-210ENST00000560583 STOX2Q9P2F5 926 aaPredicted RBP17.08■□□□□ 0.32
RPL28-210ENST00000560583 NXT1Q9UKK6 140 aaKnown RBP17.08■□□□□ 0.32
RPL28-210ENST00000560583 MED16Q9Y2X0 877 aa17.08■□□□□ 0.32
RPL28-210ENST00000560583 CPAMD8Q8IZJ3 1885 aa17.07■□□□□ 0.32
RPL28-210ENST00000560583 HYKKA2RU49 373 aa17.07■□□□□ 0.32
RPL28-210ENST00000560583 H3BMM5 538 aa17.07■□□□□ 0.32
RPL28-210ENST00000560583 MYO1CO00159 1063 aa17.07■□□□□ 0.32
RPL28-210ENST00000560583 SRPX2O60687 465 aaPredicted RBP17.07■□□□□ 0.32
RPL28-210ENST00000560583 PSIP1O75475 530 aaKnown RBP17.07■□□□□ 0.32
RPL28-210ENST00000560583 IPO13O94829 963 aaKnown RBP17.07■□□□□ 0.32
RPL28-210ENST00000560583 CBX6O95503 412 aa17.07■□□□□ 0.32
RPL28-210ENST00000560583 PIM1P11309 404 aaPredicted RBP17.07■□□□□ 0.32
RPL28-210ENST00000560583 VARSP26640 1264 aaKnown RBP17.07■□□□□ 0.32
RPL28-210ENST00000560583 Q0VFX4 171 aa17.07■□□□□ 0.32
RPL28-210ENST00000560583 HIF1AQ16665 826 aa17.07■□□□□ 0.32
RPL28-210ENST00000560583 PRTGQ2VWP7 1150 aa17.07■□□□□ 0.32
RPL28-210ENST00000560583 SUSD1Q6UWL2 747 aa17.07■□□□□ 0.32
RPL28-210ENST00000560583 IGFL2Q6UWQ7 119 aa17.07■□□□□ 0.32
RPL28-210ENST00000560583 SDCCAG8Q86SQ7 713 aaPredicted RBP17.07■□□□□ 0.32
RPL28-210ENST00000560583 RAB42Q8N4Z0 105 aa17.07■□□□□ 0.32
RPL28-210ENST00000560583 OR11G2Q8NGC1 345 aa17.07■□□□□ 0.32
RPL28-210ENST00000560583 OR9A1PQ8NGU1 263 aa17.07■□□□□ 0.32
RPL28-210ENST00000560583 FOPNLQ96NB1 174 aa17.07■□□□□ 0.32
RPL28-210ENST00000560583 OSBPL9Q96SU4 736 aa17.07■□□□□ 0.32
RPL28-210ENST00000560583 TCF12Q99081 682 aa17.07■□□□□ 0.32
RPL28-210ENST00000560583 ZFYVE21Q9BQ24 234 aa17.07■□□□□ 0.32
RPL28-210ENST00000560583 WDR77Q9BQA1 342 aaPredicted RBP17.07■□□□□ 0.32
RPL28-210ENST00000560583 DPH7Q9BTV6 452 aa17.07■□□□□ 0.32
RPL28-210ENST00000560583 ERRFI1Q9UJM3 462 aaPredicted RBP17.07■□□□□ 0.32
RPL28-210ENST00000560583 KLHL41O60662 606 aa17.06■□□□□ 0.32
RPL28-210ENST00000560583 PKMP14618 531 aaKnown RBP17.06■□□□□ 0.32
RPL28-210ENST00000560583 CLCN7P51798 805 aa17.06■□□□□ 0.32
RPL28-210ENST00000560583 SARNPP82979 210 aaKnown RBP17.06■□□□□ 0.32
RPL28-210ENST00000560583 KLC1Q07866 573 aa17.06■□□□□ 0.32
RPL28-210ENST00000560583 GPS1Q13098 491 aa17.06■□□□□ 0.32
RPL28-210ENST00000560583 RBBP7Q16576 425 aa17.06■□□□□ 0.32
RPL28-210ENST00000560583 KLHL38Q2WGJ6 581 aa17.06■□□□□ 0.32
RPL28-210ENST00000560583 FAM214AQ32MH5 1076 aa17.06■□□□□ 0.32
RPL28-210ENST00000560583 TUBB8Q3ZCM7 444 aa17.06■□□□□ 0.32
RPL28-210ENST00000560583 NEPROQ6NW34 567 aa17.06■□□□□ 0.32
RPL28-210ENST00000560583 FBXO42Q6P3S6 717 aa17.06■□□□□ 0.32
RPL28-210ENST00000560583 PAQR7Q86WK9 346 aa17.06■□□□□ 0.32
RPL28-210ENST00000560583 AGGF1Q8N302 714 aaeCLIP17.06■□□□□ 0.32
RPL28-210ENST00000560583 RASGEF1CQ8N431 466 aa17.06■□□□□ 0.32
RPL28-210ENST00000560583 ZADH2Q8N4Q0 377 aa17.06■□□□□ 0.32
RPL28-210ENST00000560583 PRR7Q8TB68 274 aa17.06■□□□□ 0.32
RPL28-210ENST00000560583 STT3BQ8TCJ2 826 aa17.06■□□□□ 0.32
RPL28-210ENST00000560583 MAGEC3Q8TD91 643 aa17.06■□□□□ 0.32
RPL28-210ENST00000560583 PPP4R1Q8TF05 950 aa17.06■□□□□ 0.32
RPL28-210ENST00000560583 TM9SF4Q92544 642 aa17.06■□□□□ 0.32
RPL28-210ENST00000560583 ZNF304Q9HCX3 659 aa17.06■□□□□ 0.32
RPL28-210ENST00000560583 SEMA3GQ9NS98 782 aa17.06■□□□□ 0.32
RPL28-210ENST00000560583 ZC3H7BQ9UGR2 993 aaKnown RBP17.06■□□□□ 0.32
RPL28-210ENST00000560583 NOVA2Q9UNW9 492 aaKnown RBP17.06■□□□□ 0.32
RPL28-210ENST00000560583 IGLV3-12A0A075B6K2 115 aa17.05■□□□□ 0.32
RPL28-210ENST00000560583 ZCWPW2A0A1B0GU75 182 aa17.05■□□□□ 0.32
RPL28-210ENST00000560583 H0YGG7 62 aa17.05■□□□□ 0.32
RPL28-210ENST00000560583 KRT14P02533 472 aa17.05■□□□□ 0.32
RPL28-210ENST00000560583 EIF2S1P05198 315 aaKnown RBP17.05■□□□□ 0.32
RPL28-210ENST00000560583 CHRM3P20309 590 aa17.05■□□□□ 0.32
RPL28-210ENST00000560583 CMPK1P30085 196 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms