RNA–Protein interactions for RNA: ENST00000560562.5

TNFAIP2-207, Transcript of TNF alpha induced protein 2, humanhuman

TSL 1 (best)

Gene TNFAIP2, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP2-207ENST00000560562 PARD6BQ9BYG5 372 aa13.42□□□□□ -0.26
TNFAIP2-207ENST00000560562 CLMPQ9H6B4 373 aa13.42□□□□□ -0.26
TNFAIP2-207ENST00000560562 ENAMQ9NRM1 1142 aa13.42□□□□□ -0.26
TNFAIP2-207ENST00000560562 IARS2Q9NSE4 1012 aaKnown RBP13.42□□□□□ -0.26
TNFAIP2-207ENST00000560562 IRAK4Q9NWZ3 460 aa13.42□□□□□ -0.26
TNFAIP2-207ENST00000560562 SPATA7Q9P0W8 599 aa13.42□□□□□ -0.26
TNFAIP2-207ENST00000560562 ASIC3Q9UHC3 531 aa13.42□□□□□ -0.26
TNFAIP2-207ENST00000560562 FBXO5Q9UKT4 447 aa13.42□□□□□ -0.26
TNFAIP2-207ENST00000560562 SRPK3Q9UPE1 567 aa13.42□□□□□ -0.26
TNFAIP2-207ENST00000560562 PTRH2Q9Y3E5 179 aaKnown RBP13.42□□□□□ -0.26
TNFAIP2-207ENST00000560562 SCN2AQ99250 2005 aa13.42□□□□□ -0.26
TNFAIP2-207ENST00000560562 USP9YO00507 2555 aaPredicted RBP13.41□□□□□ -0.26
TNFAIP2-207ENST00000560562 PFDN6O15212 129 aa13.41□□□□□ -0.26
TNFAIP2-207ENST00000560562 TP73O15350 636 aa13.41□□□□□ -0.26
TNFAIP2-207ENST00000560562 ERVK-10P10266 1014 aa13.41□□□□□ -0.26
TNFAIP2-207ENST00000560562 AGXTP21549 392 aa13.41□□□□□ -0.26
TNFAIP2-207ENST00000560562 OTX2P32243 289 aa13.41□□□□□ -0.26
TNFAIP2-207ENST00000560562 VSX2P58304 361 aaPredicted RBP13.41□□□□□ -0.26
TNFAIP2-207ENST00000560562 KCNC4Q03721 635 aa13.41□□□□□ -0.26
TNFAIP2-207ENST00000560562 KLRB1Q12918 225 aa13.41□□□□□ -0.26
TNFAIP2-207ENST00000560562 TTC23LQ6PF05 361 aa13.41□□□□□ -0.26
TNFAIP2-207ENST00000560562 TTLL10Q6ZVT0 673 aa13.41□□□□□ -0.26
TNFAIP2-207ENST00000560562 RNF44Q7L0R7 432 aa13.41□□□□□ -0.26
TNFAIP2-207ENST00000560562 PIWIL4Q7Z3Z4 852 aaKnown RBP13.41□□□□□ -0.26
TNFAIP2-207ENST00000560562 KCNMB4Q86W47 210 aa13.41□□□□□ -0.26
TNFAIP2-207ENST00000560562 CPNE9Q8IYJ1 553 aa13.41□□□□□ -0.26
TNFAIP2-207ENST00000560562 METTL27Q8N6F8 245 aaPredicted RBP13.41□□□□□ -0.26
TNFAIP2-207ENST00000560562 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.41□□□□□ -0.26
TNFAIP2-207ENST00000560562 PPFIBP2Q8ND30 876 aa13.41□□□□□ -0.26
TNFAIP2-207ENST00000560562 SPATA4Q8NEY3 305 aa13.41□□□□□ -0.26
TNFAIP2-207ENST00000560562 DLG3Q92796 817 aa13.41□□□□□ -0.26
TNFAIP2-207ENST00000560562 KCNJ9Q92806 393 aa13.41□□□□□ -0.26
TNFAIP2-207ENST00000560562 NDNQ99608 321 aa13.41□□□□□ -0.26
TNFAIP2-207ENST00000560562 TRIM51Q9BSJ1 452 aa13.41□□□□□ -0.26
TNFAIP2-207ENST00000560562 NDC1Q9BTX1 674 aa13.41□□□□□ -0.26
TNFAIP2-207ENST00000560562 DHRS4Q9BTZ2 278 aa13.41□□□□□ -0.26
TNFAIP2-207ENST00000560562 NUDT9Q9BW91 350 aa13.41□□□□□ -0.26
TNFAIP2-207ENST00000560562 ACSS2Q9NR19 701 aa13.41□□□□□ -0.26
TNFAIP2-207ENST00000560562 TXLNGQ9NUQ3 528 aa13.41□□□□□ -0.26
TNFAIP2-207ENST00000560562 STOX2Q9P2F5 926 aaPredicted RBP13.41□□□□□ -0.26
TNFAIP2-207ENST00000560562 IFT80Q9P2H3 777 aaPredicted RBP13.41□□□□□ -0.26
TNFAIP2-207ENST00000560562 VPS9D1Q9Y2B5 631 aa13.41□□□□□ -0.26
TNFAIP2-207ENST00000560562 A0A0J9YVX5 310 aa13.4□□□□□ -0.26
TNFAIP2-207ENST00000560562 A0A1B0GX78 115 aa13.4□□□□□ -0.26
TNFAIP2-207ENST00000560562 OR2A25A4D2G3 310 aa13.4□□□□□ -0.26
TNFAIP2-207ENST00000560562 FITM1A5D6W6 292 aa13.4□□□□□ -0.26
TNFAIP2-207ENST00000560562 TARM1B6A8C7 271 aa13.4□□□□□ -0.26
TNFAIP2-207ENST00000560562 SLC16A8O95907 504 aa13.4□□□□□ -0.26
TNFAIP2-207ENST00000560562 PGAM1P18669 254 aa13.4□□□□□ -0.26
TNFAIP2-207ENST00000560562 ALAS2P22557 587 aa13.4□□□□□ -0.26
TNFAIP2-207ENST00000560562 PGGT1BP53609 377 aa13.4□□□□□ -0.26
TNFAIP2-207ENST00000560562 SNRPNP63162 240 aaKnown RBP13.4□□□□□ -0.26
TNFAIP2-207ENST00000560562 FOXK1P85037 733 aa13.4□□□□□ -0.26
TNFAIP2-207ENST00000560562 HP1BP3Q5SSJ5 553 aaPredicted RBP13.4□□□□□ -0.26
TNFAIP2-207ENST00000560562 RBM20Q5T481 1227 aaKnown RBP13.4□□□□□ -0.26
TNFAIP2-207ENST00000560562 WDR93Q6P2C0 686 aa13.4□□□□□ -0.26
TNFAIP2-207ENST00000560562 NEK10Q6ZWH5 1172 aa13.4□□□□□ -0.26
TNFAIP2-207ENST00000560562 PPP1R32Q7Z5V6 425 aa13.4□□□□□ -0.26
TNFAIP2-207ENST00000560562 KLHL7Q8IXQ5 586 aa13.4□□□□□ -0.26
TNFAIP2-207ENST00000560562 LRRC56Q8IYG6 542 aaPredicted RBP13.4□□□□□ -0.26
TNFAIP2-207ENST00000560562 C2CD4AQ8NCU7 369 aaPredicted RBP13.4□□□□□ -0.26
TNFAIP2-207ENST00000560562 FDCSPQ8NFU4 85 aa13.4□□□□□ -0.26
TNFAIP2-207ENST00000560562 OR2Y1Q8NGV0 311 aa13.4□□□□□ -0.26
TNFAIP2-207ENST00000560562 ZNF480Q8WV37 535 aa13.4□□□□□ -0.26
TNFAIP2-207ENST00000560562 ASB11Q8WXH4 323 aa13.4□□□□□ -0.26
TNFAIP2-207ENST00000560562 ZUFSPQ96AP4 578 aa13.4□□□□□ -0.26
TNFAIP2-207ENST00000560562 EBNA1BP2Q99848 306 aaKnown RBP13.4□□□□□ -0.26
TNFAIP2-207ENST00000560562 SELENOSQ9BQE4 189 aa13.4□□□□□ -0.26
TNFAIP2-207ENST00000560562 MESP1Q9BRJ9 268 aa13.4□□□□□ -0.26
TNFAIP2-207ENST00000560562 AARSD1Q9BTE6 412 aaKnown RBP13.4□□□□□ -0.26
TNFAIP2-207ENST00000560562 DPH7Q9BTV6 452 aa13.4□□□□□ -0.26
TNFAIP2-207ENST00000560562 SLC25A23Q9BV35 468 aa13.4□□□□□ -0.26
TNFAIP2-207ENST00000560562 CUTCQ9NTM9 273 aa13.4□□□□□ -0.26
TNFAIP2-207ENST00000560562 INTS7Q9NVH2 962 aaKnown RBP13.4□□□□□ -0.26
TNFAIP2-207ENST00000560562 ARGLU1Q9NWB6 273 aaPredicted RBP13.4□□□□□ -0.26
TNFAIP2-207ENST00000560562 PADI2Q9Y2J8 665 aa13.4□□□□□ -0.26
TNFAIP2-207ENST00000560562 DHRS7Q9Y394 339 aa13.4□□□□□ -0.26
TNFAIP2-207ENST00000560562 PCDHGA9Q9Y5G4 932 aaKnown RBP13.4□□□□□ -0.26
TNFAIP2-207ENST00000560562 SPTBN1Q01082 2364 aaKnown RBP13.4□□□□□ -0.26
TNFAIP2-207ENST00000560562 ESPL1Q14674 2120 aa13.4□□□□□ -0.26
TNFAIP2-207ENST00000560562 CCDC151A5D8V7 595 aa13.39□□□□□ -0.27
TNFAIP2-207ENST00000560562 GFYI3L273 518 aa13.39□□□□□ -0.27
TNFAIP2-207ENST00000560562 DSCR3O14972 297 aa13.39□□□□□ -0.27
TNFAIP2-207ENST00000560562 FKBP9O95302 570 aa13.39□□□□□ -0.27
TNFAIP2-207ENST00000560562 ONECUT2O95948 504 aa13.39□□□□□ -0.27
TNFAIP2-207ENST00000560562 FOLR3P41439 243 aa13.39□□□□□ -0.27
TNFAIP2-207ENST00000560562 MLLT10P55197 1068 aa13.39□□□□□ -0.27
TNFAIP2-207ENST00000560562 RAPSNQ13702 412 aa13.39□□□□□ -0.27
TNFAIP2-207ENST00000560562 NADK2Q4G0N4 442 aa13.39□□□□□ -0.27
TNFAIP2-207ENST00000560562 ZC3H12BQ5HYM0 836 aaKnown RBP13.39□□□□□ -0.27
TNFAIP2-207ENST00000560562 WASHC2DQ5SRD0 308 aa13.39□□□□□ -0.27
TNFAIP2-207ENST00000560562 FBXO42Q6P3S6 717 aa13.39□□□□□ -0.27
TNFAIP2-207ENST00000560562 MAGEC3Q8TD91 643 aa13.39□□□□□ -0.27
TNFAIP2-207ENST00000560562 C10orf90Q96M02 699 aa13.39□□□□□ -0.27
TNFAIP2-207ENST00000560562 SPSB2Q99619 263 aa13.39□□□□□ -0.27
TNFAIP2-207ENST00000560562 FAM167BQ9BTA0 163 aa13.39□□□□□ -0.27
TNFAIP2-207ENST00000560562 ZNF446Q9NWS9 450 aa13.39□□□□□ -0.27
TNFAIP2-207ENST00000560562 CTSFQ9UBX1 484 aa13.39□□□□□ -0.27
TNFAIP2-207ENST00000560562 NDOR1Q9UHB4 597 aa13.39□□□□□ -0.27
TNFAIP2-207ENST00000560562 TAC3Q9UHF0 121 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms