RNA–Protein interactions for RNA: ENST00000560463.5

TRAF3-209, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-209ENST00000560463 AVPR2P30518 371 aa8.32□□□□□ -1.08
TRAF3-209ENST00000560463 CTSKP43235 329 aa8.32□□□□□ -1.08
TRAF3-209ENST00000560463 NUBP1P53384 320 aa8.32□□□□□ -1.08
TRAF3-209ENST00000560463 CSTF3Q12996 717 aaKnown RBP8.32□□□□□ -1.08
TRAF3-209ENST00000560463 MAD2L1Q13257 205 aaPredicted RBP8.32□□□□□ -1.08
TRAF3-209ENST00000560463 DOC2AQ14183 400 aa8.32□□□□□ -1.08
TRAF3-209ENST00000560463 FASTKQ14296 549 aaKnown RBP8.32□□□□□ -1.08
TRAF3-209ENST00000560463 KRT72Q14CN4 511 aa8.32□□□□□ -1.08
TRAF3-209ENST00000560463 CPSF6Q16630 551 aaKnown RBP eCLIP8.32□□□□□ -1.08
TRAF3-209ENST00000560463 LACTB2Q53H82 288 aaPredicted RBP8.32□□□□□ -1.08
TRAF3-209ENST00000560463 ZNF542PQ5EBM4 170 aa8.32□□□□□ -1.08
TRAF3-209ENST00000560463 PAGE2BQ5JRK9 111 aa8.32□□□□□ -1.08
TRAF3-209ENST00000560463 NXNQ6DKJ4 435 aa8.32□□□□□ -1.08
TRAF3-209ENST00000560463 OGFOD2Q6N063 350 aa8.32□□□□□ -1.08
TRAF3-209ENST00000560463 DUS1LQ6P1R4 473 aaKnown RBP8.32□□□□□ -1.08
TRAF3-209ENST00000560463 FOXR1Q6PIV2 292 aa8.32□□□□□ -1.08
TRAF3-209ENST00000560463 IL27RAQ6UWB1 636 aa8.32□□□□□ -1.08
TRAF3-209ENST00000560463 SUSD1Q6UWL2 747 aa8.32□□□□□ -1.08
TRAF3-209ENST00000560463 SLCO4C1Q6ZQN7 724 aa8.32□□□□□ -1.08
TRAF3-209ENST00000560463 CHSY3Q70JA7 882 aa8.32□□□□□ -1.08
TRAF3-209ENST00000560463 ARMCX6Q7L4S7 300 aa8.32□□□□□ -1.08
TRAF3-209ENST00000560463 TRIM46Q7Z4K8 759 aa8.32□□□□□ -1.08
TRAF3-209ENST00000560463 SLC9B2Q86UD5 537 aa8.32□□□□□ -1.08
TRAF3-209ENST00000560463 ALYREFQ86V81 257 aaKnown RBP8.32□□□□□ -1.08
TRAF3-209ENST00000560463 C17orf64Q86WR6 236 aa8.32□□□□□ -1.08
TRAF3-209ENST00000560463 SYT12Q8IV01 421 aa8.32□□□□□ -1.08
TRAF3-209ENST00000560463 PARP9Q8IXQ6 854 aa8.32□□□□□ -1.08
TRAF3-209ENST00000560463 NAGSQ8N159 534 aa8.32□□□□□ -1.08
TRAF3-209ENST00000560463 SFRP1Q8N474 314 aa8.32□□□□□ -1.08
TRAF3-209ENST00000560463 CPSF7Q8N684 471 aaKnown RBP8.32□□□□□ -1.08
TRAF3-209ENST00000560463 ZBTB44Q8NCP5 570 aa8.32□□□□□ -1.08
TRAF3-209ENST00000560463 FAM46DQ8NEK8 389 aa8.32□□□□□ -1.08
TRAF3-209ENST00000560463 CEP76Q8TAP6 659 aa8.32□□□□□ -1.08
TRAF3-209ENST00000560463 ZDHHC1Q8WTX9 485 aa8.32□□□□□ -1.08
TRAF3-209ENST00000560463 SLC5A11Q8WWX8 675 aa8.32□□□□□ -1.08
TRAF3-209ENST00000560463 LCN9Q8WX39 176 aa8.32□□□□□ -1.08
TRAF3-209ENST00000560463 USP7Q93009 1102 aa8.32□□□□□ -1.08
TRAF3-209ENST00000560463 NEIL2Q969S2 332 aa8.32□□□□□ -1.08
TRAF3-209ENST00000560463 UBE2E3Q969T4 207 aa8.32□□□□□ -1.08
TRAF3-209ENST00000560463 SH3KBP1Q96B97 665 aa8.32□□□□□ -1.08
TRAF3-209ENST00000560463 ERP27Q96DN0 273 aa8.32□□□□□ -1.08
TRAF3-209ENST00000560463 METTL2AQ96IZ6 378 aaKnown RBP8.32□□□□□ -1.08
TRAF3-209ENST00000560463 PPP1R36Q96LQ0 422 aa8.32□□□□□ -1.08
TRAF3-209ENST00000560463 CCDC106Q9BWC9 280 aa8.32□□□□□ -1.08
TRAF3-209ENST00000560463 TUBB1Q9H4B7 451 aa8.32□□□□□ -1.08
TRAF3-209ENST00000560463 ELOVL6Q9H5J4 265 aa8.32□□□□□ -1.08
TRAF3-209ENST00000560463 WDR55Q9H6Y2 383 aaPredicted RBP8.32□□□□□ -1.08
TRAF3-209ENST00000560463 AKTIPQ9H8T0 292 aa8.32□□□□□ -1.08
TRAF3-209ENST00000560463 BRF2Q9HAW0 419 aa8.32□□□□□ -1.08
TRAF3-209ENST00000560463 CPNE7Q9UBL6 633 aa8.32□□□□□ -1.08
TRAF3-209ENST00000560463 CIDEBQ9UHD4 219 aa8.32□□□□□ -1.08
TRAF3-209ENST00000560463 ADGRE2Q9UHX3 823 aa8.32□□□□□ -1.08
TRAF3-209ENST00000560463 ZNF490Q9ULM2 529 aaPredicted RBP8.32□□□□□ -1.08
TRAF3-209ENST00000560463 PLAGL1Q9UM63 463 aa8.32□□□□□ -1.08
TRAF3-209ENST00000560463 DOLKQ9UPQ8 538 aa8.32□□□□□ -1.08
TRAF3-209ENST00000560463 ICKQ9UPZ9 632 aa8.32□□□□□ -1.08
TRAF3-209ENST00000560463 TSC22D4Q9Y3Q8 395 aa8.32□□□□□ -1.08
TRAF3-209ENST00000560463 PCDHB11Q9Y5F2 797 aa8.32□□□□□ -1.08
TRAF3-209ENST00000560463 CSNK1G3Q9Y6M4 447 aa8.32□□□□□ -1.08
TRAF3-209ENST00000560463 ADAMTS20P59510 1910 aa8.32□□□□□ -1.08
TRAF3-209ENST00000560463 COL5A1P20908 1838 aaPredicted RBP8.31□□□□□ -1.08
TRAF3-209ENST00000560463 KCNE1BA0A087WTH5 132 aa8.31□□□□□ -1.08
TRAF3-209ENST00000560463 A0A1W2PPV9 198 aa8.31□□□□□ -1.08
TRAF3-209ENST00000560463 E9PBE3 544 aa8.31□□□□□ -1.08
TRAF3-209ENST00000560463 NPIPB8E9PQR5 432 aa8.31□□□□□ -1.08
TRAF3-209ENST00000560463 MANBAO00462 879 aa8.31□□□□□ -1.08
TRAF3-209ENST00000560463 UBDO15205 165 aa8.31□□□□□ -1.08
TRAF3-209ENST00000560463 HRO43593 1189 aa8.31□□□□□ -1.08
TRAF3-209ENST00000560463 PRICKLE3O43900 615 aaPredicted RBP8.31□□□□□ -1.08
TRAF3-209ENST00000560463 KLHL41O60662 606 aa8.31□□□□□ -1.08
TRAF3-209ENST00000560463 PIAS2O75928 621 aa8.31□□□□□ -1.08
TRAF3-209ENST00000560463 FKBP9O95302 570 aa8.31□□□□□ -1.08
TRAF3-209ENST00000560463 LINC00032P0C843 101 aa8.31□□□□□ -1.08
TRAF3-209ENST00000560463 PRR35P0CG20 571 aa8.31□□□□□ -1.08
TRAF3-209ENST00000560463 SPTBP11277 2137 aa8.31□□□□□ -1.08
TRAF3-209ENST00000560463 PRPH2P23942 346 aa8.31□□□□□ -1.08
TRAF3-209ENST00000560463 FASLGP48023 281 aa8.31□□□□□ -1.08
TRAF3-209ENST00000560463 RXRGP48443 463 aa8.31□□□□□ -1.08
TRAF3-209ENST00000560463 ARRB1P49407 418 aaPredicted RBP8.31□□□□□ -1.08
TRAF3-209ENST00000560463 ATP4BP51164 291 aa8.31□□□□□ -1.08
TRAF3-209ENST00000560463 ERVK-8P63133 956 aa8.31□□□□□ -1.08
TRAF3-209ENST00000560463 UBE2IP63279 158 aaKnown RBP8.31□□□□□ -1.08
TRAF3-209ENST00000560463 ABATP80404 500 aa8.31□□□□□ -1.08
TRAF3-209ENST00000560463 PRDX1Q06830 199 aaKnown RBP8.31□□□□□ -1.08
TRAF3-209ENST00000560463 GRIK2Q13002 908 aa8.31□□□□□ -1.08
TRAF3-209ENST00000560463 TSTA3Q13630 321 aaPredicted RBP8.31□□□□□ -1.08
TRAF3-209ENST00000560463 KIR2DS3Q14952 304 aa8.31□□□□□ -1.08
TRAF3-209ENST00000560463 ABRAXAS2Q15018 415 aa8.31□□□□□ -1.08
TRAF3-209ENST00000560463 ZRSR2Q15696 482 aaKnown RBP8.31□□□□□ -1.08
TRAF3-209ENST00000560463 GSTA3Q16772 222 aa8.31□□□□□ -1.08
TRAF3-209ENST00000560463 IMPG1Q17R60 797 aa8.31□□□□□ -1.08
TRAF3-209ENST00000560463 GALNTL6Q49A17 601 aa8.31□□□□□ -1.08
TRAF3-209ENST00000560463 ATP6AP1LQ52LC2 224 aa8.31□□□□□ -1.08
TRAF3-209ENST00000560463 FRG2Q64ET8 278 aa8.31□□□□□ -1.08
TRAF3-209ENST00000560463 ICE2Q659A1 982 aa8.31□□□□□ -1.08
TRAF3-209ENST00000560463 MED27Q6P2C8 311 aa8.31□□□□□ -1.08
TRAF3-209ENST00000560463 NXPE4Q6UWF7 544 aa8.31□□□□□ -1.08
TRAF3-209ENST00000560463 Q6ZSR9 355 aa8.31□□□□□ -1.08
TRAF3-209ENST00000560463 CEP68Q76N32 757 aa8.31□□□□□ -1.08
TRAF3-209ENST00000560463 SPATA19Q7Z5L4 167 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms