RNA–Protein interactions for RNA: ENST00000560260.5

SNX1-210, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 1,326 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-210ENST00000560260 C12orf65Q9H3J6 166 aaKnown RBP20.96■□□□□ 0.95
SNX1-210ENST00000560260 WWOXQ9NZC7 414 aa20.96■□□□□ 0.95
SNX1-210ENST00000560260 CPSF2Q9P2I0 782 aaKnown RBP20.96■□□□□ 0.95
SNX1-210ENST00000560260 MSRB2Q9Y3D2 182 aa20.96■□□□□ 0.95
SNX1-210ENST00000560260 PLD2O14939 933 aa20.95■□□□□ 0.94
SNX1-210ENST00000560260 HCRTR1O43613 425 aa20.95■□□□□ 0.94
SNX1-210ENST00000560260 KLK8O60259 260 aa20.95■□□□□ 0.94
SNX1-210ENST00000560260 GLRA3O75311 464 aa20.95■□□□□ 0.94
SNX1-210ENST00000560260 RBP1P09455 135 aa20.95■□□□□ 0.94
SNX1-210ENST00000560260 FOLR1P15328 257 aa20.95■□□□□ 0.94
SNX1-210ENST00000560260 GGT5P36269 586 aa20.95■□□□□ 0.94
SNX1-210ENST00000560260 HSPA7P48741 367 aa20.95■□□□□ 0.94
SNX1-210ENST00000560260 HNMTP50135 292 aa20.95■□□□□ 0.94
SNX1-210ENST00000560260 SHC2P98077 582 aa20.95■□□□□ 0.94
SNX1-210ENST00000560260 PRDX1Q06830 199 aaKnown RBP20.95■□□□□ 0.94
SNX1-210ENST00000560260 TNFAIP8L3Q5GJ75 292 aa20.95■□□□□ 0.94
SNX1-210ENST00000560260 THEMIS2Q5TEJ8 643 aa20.95■□□□□ 0.94
SNX1-210ENST00000560260 SULT1C3Q6IMI6 304 aa20.95■□□□□ 0.94
SNX1-210ENST00000560260 FOXR1Q6PIV2 292 aa20.95■□□□□ 0.94
SNX1-210ENST00000560260 LCTLQ6UWM7 567 aa20.95■□□□□ 0.94
SNX1-210ENST00000560260 LCA5Q86VQ0 697 aa20.95■□□□□ 0.94
SNX1-210ENST00000560260 FAM129CQ86XR2 697 aa20.95■□□□□ 0.94
SNX1-210ENST00000560260 SRRM1Q8IYB3 904 aaKnown RBP20.95■□□□□ 0.94
SNX1-210ENST00000560260 UBTD2Q8WUN7 234 aa20.95■□□□□ 0.94
SNX1-210ENST00000560260 CMKLR1Q99788 373 aa20.95■□□□□ 0.94
SNX1-210ENST00000560260 MRPL57Q9BQC6 102 aaKnown RBP20.95■□□□□ 0.94
SNX1-210ENST00000560260 ARGLU1Q9NWB6 273 aaPredicted RBP20.95■□□□□ 0.94
SNX1-210ENST00000560260 SOHLH2Q9NX45 425 aa20.95■□□□□ 0.94
SNX1-210ENST00000560260 PISDQ9UG56 409 aa20.95■□□□□ 0.94
SNX1-210ENST00000560260 KLK4Q9Y5K2 254 aa20.95■□□□□ 0.94
SNX1-210ENST00000560260 PCM1Q15154 2024 aa20.94■□□□□ 0.94
SNX1-210ENST00000560260 LRRC14BA6NHZ5 514 aa20.94■□□□□ 0.94
SNX1-210ENST00000560260 SYCE1LA8MT33 242 aa20.94■□□□□ 0.94
SNX1-210ENST00000560260 MAP2K7O14733 419 aa20.94■□□□□ 0.94
SNX1-210ENST00000560260 RGS16O15492 202 aaPredicted RBP20.94■□□□□ 0.94
SNX1-210ENST00000560260 FKBP9O95302 570 aa20.94■□□□□ 0.94
SNX1-210ENST00000560260 GSTA1P08263 222 aa20.94■□□□□ 0.94
SNX1-210ENST00000560260 NPPBP16860 134 aa20.94■□□□□ 0.94
SNX1-210ENST00000560260 CMPK1P30085 196 aa20.94■□□□□ 0.94
SNX1-210ENST00000560260 GABRA4P48169 554 aa20.94■□□□□ 0.94
SNX1-210ENST00000560260 GABREP78334 506 aa20.94■□□□□ 0.94
SNX1-210ENST00000560260 HSD11B2P80365 405 aa20.94■□□□□ 0.94
SNX1-210ENST00000560260 EIF3IQ13347 325 aaKnown RBP20.94■□□□□ 0.94
SNX1-210ENST00000560260 DEFB110Q30KQ9 67 aa20.94■□□□□ 0.94
SNX1-210ENST00000560260 ZNF425Q6IV72 752 aa20.94■□□□□ 0.94
SNX1-210ENST00000560260 FIGLAQ6QHK4 219 aa20.94■□□□□ 0.94
SNX1-210ENST00000560260 THOC6Q86W42 341 aaKnown RBP20.94■□□□□ 0.94
SNX1-210ENST00000560260 TCAIMQ8N3R3 496 aa20.94■□□□□ 0.94
SNX1-210ENST00000560260 DPH7Q9BTV6 452 aa20.94■□□□□ 0.94
SNX1-210ENST00000560260 SYNPO2LQ9H987 977 aa20.94■□□□□ 0.94
SNX1-210ENST00000560260 APMAPQ9HDC9 416 aa20.94■□□□□ 0.94
SNX1-210ENST00000560260 MRPS30Q9NP92 439 aaKnown RBP20.94■□□□□ 0.94
SNX1-210ENST00000560260 MKS1Q9NXB0 559 aa20.94■□□□□ 0.94
SNX1-210ENST00000560260 SLC22A14Q9Y267 594 aa20.94■□□□□ 0.94
SNX1-210ENST00000560260 TRABD2BA6NFA1 517 aa20.93■□□□□ 0.94
SNX1-210ENST00000560260 AGPSO00116 658 aa20.93■□□□□ 0.94
SNX1-210ENST00000560260 WDR47O94967 919 aa20.93■□□□□ 0.94
SNX1-210ENST00000560260 S100BP04271 92 aaPredicted RBP20.93■□□□□ 0.94
SNX1-210ENST00000560260 CCND1P24385 295 aa20.93■□□□□ 0.94
SNX1-210ENST00000560260 CRHR1P34998 444 aa20.93■□□□□ 0.94
SNX1-210ENST00000560260 MLLT3P42568 568 aaPredicted RBP20.93■□□□□ 0.94
SNX1-210ENST00000560260 SETDB1Q15047 1291 aa20.93■□□□□ 0.94
SNX1-210ENST00000560260 GPR19Q15760 415 aa20.93■□□□□ 0.94
SNX1-210ENST00000560260 PAQR7Q86WK9 346 aa20.93■□□□□ 0.94
SNX1-210ENST00000560260 PTGR2Q8N8N7 351 aaPredicted RBP20.93■□□□□ 0.94
SNX1-210ENST00000560260 BANPQ8N9N5 519 aa20.93■□□□□ 0.94
SNX1-210ENST00000560260 POLR1BQ9H9Y6 1135 aa20.93■□□□□ 0.94
SNX1-210ENST00000560260 PCDHGA8Q9Y5G5 932 aa20.93■□□□□ 0.94
SNX1-210ENST00000560260 OR2A25A4D2G3 310 aa20.92■□□□□ 0.94
SNX1-210ENST00000560260 B4E171 279 aa20.92■□□□□ 0.94
SNX1-210ENST00000560260 COPEO14579 308 aa20.92■□□□□ 0.94
SNX1-210ENST00000560260 CTSVO60911 334 aa20.92■□□□□ 0.94
SNX1-210ENST00000560260 CCNDBP1O95273 360 aa20.92■□□□□ 0.94
SNX1-210ENST00000560260 PROCP04070 461 aa20.92■□□□□ 0.94
SNX1-210ENST00000560260 CTSBP07858 339 aa20.92■□□□□ 0.94
SNX1-210ENST00000560260 GFAPP14136 432 aa20.92■□□□□ 0.94
SNX1-210ENST00000560260 EPORP19235 508 aa20.92■□□□□ 0.94
SNX1-210ENST00000560260 TSPAN7P41732 249 aa20.92■□□□□ 0.94
SNX1-210ENST00000560260 MAPK10P53779 464 aa20.92■□□□□ 0.94
SNX1-210ENST00000560260 ABATP80404 500 aa20.92■□□□□ 0.94
SNX1-210ENST00000560260 MC2RQ01718 297 aa20.92■□□□□ 0.94
SNX1-210ENST00000560260 RTP5Q14D33 572 aa20.92■□□□□ 0.94
SNX1-210ENST00000560260 PFKFB4Q16877 469 aa20.92■□□□□ 0.94
SNX1-210ENST00000560260 DNAJC22Q8N4W6 341 aa20.92■□□□□ 0.94
SNX1-210ENST00000560260 APOPT1Q96IL0 206 aa20.92■□□□□ 0.94
SNX1-210ENST00000560260 FCRL4Q96PJ5 515 aa20.92■□□□□ 0.94
SNX1-210ENST00000560260 CTRCQ99895 268 aa20.92■□□□□ 0.94
SNX1-210ENST00000560260 PLCD4Q9BRC7 762 aa20.92■□□□□ 0.94
SNX1-210ENST00000560260 TMEM121BQ9BXQ6 578 aaPredicted RBP20.92■□□□□ 0.94
SNX1-210ENST00000560260 NRSN2Q9GZP1 204 aa20.92■□□□□ 0.94
SNX1-210ENST00000560260 CHRNA10Q9GZZ6 450 aa20.92■□□□□ 0.94
SNX1-210ENST00000560260 PCBD2Q9H0N5 130 aa20.92■□□□□ 0.94
SNX1-210ENST00000560260 PDE7BQ9NP56 450 aa20.92■□□□□ 0.94
SNX1-210ENST00000560260 AKAP7Q9P0M2 348 aaPredicted RBP20.92■□□□□ 0.94
SNX1-210ENST00000560260 DCDC2Q9UHG0 476 aa20.92■□□□□ 0.94
SNX1-210ENST00000560260 ANGPTL2Q9UKU9 493 aa20.92■□□□□ 0.94
SNX1-210ENST00000560260 HEATR5BQ9P2D3 2071 aa20.92■□□□□ 0.94
SNX1-210ENST00000560260 ASPMQ8IZT6 3477 aa20.91■□□□□ 0.94
SNX1-210ENST00000560260 A8MT66 165 aa20.91■□□□□ 0.94
SNX1-210ENST00000560260 PLIN3O60664 434 aa20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms