RNA–Protein interactions for RNA: ENST00000559974.5

RABGGTA-212, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,963 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-212ENST00000559974 KXD1Q9BQD3 176 aa14.04□□□□□ -0.16
RABGGTA-212ENST00000559974 CCM2Q9BSQ5 444 aa14.04□□□□□ -0.16
RABGGTA-212ENST00000559974 OSBPL6Q9BZF3 934 aa14.04□□□□□ -0.16
RABGGTA-212ENST00000559974 GRIP2Q9C0E4 1043 aa14.04□□□□□ -0.16
RABGGTA-212ENST00000559974 PAIP1Q9H074 479 aaKnown RBP14.04□□□□□ -0.16
RABGGTA-212ENST00000559974 KCNH6Q9H252 994 aa14.04□□□□□ -0.16
RABGGTA-212ENST00000559974 RMND5AQ9H871 391 aa14.04□□□□□ -0.16
RABGGTA-212ENST00000559974 SLC24A3Q9HC58 644 aa14.04□□□□□ -0.16
RABGGTA-212ENST00000559974 PAPOLBQ9NRJ5 636 aaKnown RBP14.04□□□□□ -0.16
RABGGTA-212ENST00000559974 OLAHQ9NV23 265 aa14.04□□□□□ -0.16
RABGGTA-212ENST00000559974 ZNF639Q9UID6 485 aa14.04□□□□□ -0.16
RABGGTA-212ENST00000559974 CDH7Q9ULB5 785 aa14.04□□□□□ -0.16
RABGGTA-212ENST00000559974 MYRFQ9Y2G1 1151 aa14.04□□□□□ -0.16
RABGGTA-212ENST00000559974 KIF26AQ9ULI4 1882 aaPredicted RBP14.04□□□□□ -0.16
RABGGTA-212ENST00000559974 NUP214P35658 2090 aaPredicted RBP14.04□□□□□ -0.16
RABGGTA-212ENST00000559974 PCM1Q15154 2024 aa14.04□□□□□ -0.16
RABGGTA-212ENST00000559974 A0A096LPI6 279 aa14.03□□□□□ -0.16
RABGGTA-212ENST00000559974 SLC5A10A0PJK1 596 aa14.03□□□□□ -0.16
RABGGTA-212ENST00000559974 H3BNH8 94 aa14.03□□□□□ -0.16
RABGGTA-212ENST00000559974 OR6B1O95007 311 aa14.03□□□□□ -0.16
RABGGTA-212ENST00000559974 CATP04040 527 aaKnown RBP14.03□□□□□ -0.16
RABGGTA-212ENST00000559974 PRNPP04156 253 aa14.03□□□□□ -0.16
RABGGTA-212ENST00000559974 AMD1P17707 334 aa14.03□□□□□ -0.16
RABGGTA-212ENST00000559974 MYF6P23409 242 aa14.03□□□□□ -0.16
RABGGTA-212ENST00000559974 TACR1P25103 407 aa14.03□□□□□ -0.16
RABGGTA-212ENST00000559974 MAPK9P45984 424 aa14.03□□□□□ -0.16
RABGGTA-212ENST00000559974 PREPP48147 710 aa14.03□□□□□ -0.16
RABGGTA-212ENST00000559974 CSTF3Q12996 717 aaKnown RBP14.03□□□□□ -0.16
RABGGTA-212ENST00000559974 SLC36A3Q495N2 470 aa14.03□□□□□ -0.16
RABGGTA-212ENST00000559974 NADK2Q4G0N4 442 aa14.03□□□□□ -0.16
RABGGTA-212ENST00000559974 FAM98BQ52LJ0 330 aaKnown RBP14.03□□□□□ -0.16
RABGGTA-212ENST00000559974 PYCR3Q53H96 274 aa14.03□□□□□ -0.16
RABGGTA-212ENST00000559974 THOC6Q86W42 341 aaKnown RBP14.03□□□□□ -0.16
RABGGTA-212ENST00000559974 FAM47BQ8NA70 645 aa14.03□□□□□ -0.16
RABGGTA-212ENST00000559974 TSPAN14Q8NG11 270 aa14.03□□□□□ -0.16
RABGGTA-212ENST00000559974 DTD2Q96FN9 168 aa14.03□□□□□ -0.16
RABGGTA-212ENST00000559974 RMND5BQ96G75 393 aaPredicted RBP14.03□□□□□ -0.16
RABGGTA-212ENST00000559974 ITCHQ96J02 903 aa14.03□□□□□ -0.16
RABGGTA-212ENST00000559974 VPS50Q96JG6 964 aa14.03□□□□□ -0.16
RABGGTA-212ENST00000559974 CCDC138Q96M89 665 aa14.03□□□□□ -0.16
RABGGTA-212ENST00000559974 HAUS8Q9BT25 410 aa14.03□□□□□ -0.16
RABGGTA-212ENST00000559974 WRAP53Q9BUR4 548 aaKnown RBP14.03□□□□□ -0.16
RABGGTA-212ENST00000559974 SERHLQ9NQF3 203 aa14.03□□□□□ -0.16
RABGGTA-212ENST00000559974 STOX2Q9P2F5 926 aaPredicted RBP14.03□□□□□ -0.16
RABGGTA-212ENST00000559974 PPT2Q9UMR5 302 aa14.03□□□□□ -0.16
RABGGTA-212ENST00000559974 INVSQ9Y283 1065 aa14.03□□□□□ -0.16
RABGGTA-212ENST00000559974 PCDHB14Q9Y5E9 798 aa14.03□□□□□ -0.16
RABGGTA-212ENST00000559974 MYO10Q9HD67 2058 aa14.03□□□□□ -0.16
RABGGTA-212ENST00000559974 A0A1B0GTW7 788 aa14.03□□□□□ -0.16
RABGGTA-212ENST00000559974 ELOVL7A1L3X0 281 aa14.03□□□□□ -0.16
RABGGTA-212ENST00000559974 C2CD4DB7Z1M9 353 aa14.03□□□□□ -0.16
RABGGTA-212ENST00000559974 H0Y858 1186 aa14.03□□□□□ -0.16
RABGGTA-212ENST00000559974 CLGNO14967 610 aa14.03□□□□□ -0.16
RABGGTA-212ENST00000559974 CLOCKO15516 846 aa14.03□□□□□ -0.16
RABGGTA-212ENST00000559974 NELFEP18615 380 aaKnown RBP14.03□□□□□ -0.16
RABGGTA-212ENST00000559974 MTHFRP42898 656 aa14.03□□□□□ -0.16
RABGGTA-212ENST00000559974 NR1H2P55055 460 aa14.03□□□□□ -0.16
RABGGTA-212ENST00000559974 CHRNB3Q05901 458 aa14.03□□□□□ -0.16
RABGGTA-212ENST00000559974 GTDC1Q4AE62 458 aa14.03□□□□□ -0.16
RABGGTA-212ENST00000559974 XKR6Q5GH73 641 aa14.03□□□□□ -0.16
RABGGTA-212ENST00000559974 ATG9BQ674R7 924 aa14.03□□□□□ -0.16
RABGGTA-212ENST00000559974 NOXRED1Q6NXP6 359 aa14.03□□□□□ -0.16
RABGGTA-212ENST00000559974 SLC30A9Q6PML9 568 aa14.03□□□□□ -0.16
RABGGTA-212ENST00000559974 TMEM220Q6QAJ8 160 aa14.03□□□□□ -0.16
RABGGTA-212ENST00000559974 AGTRAPQ6RW13 159 aa14.03□□□□□ -0.16
RABGGTA-212ENST00000559974 ETFBKMTQ8IXQ9 262 aa14.03□□□□□ -0.16
RABGGTA-212ENST00000559974 KLHDC8AQ8IYD2 350 aa14.03□□□□□ -0.16
RABGGTA-212ENST00000559974 GALNT15Q8N3T1 639 aa14.03□□□□□ -0.16
RABGGTA-212ENST00000559974 LILRA3Q8N6C8 439 aaPredicted RBP14.03□□□□□ -0.16
RABGGTA-212ENST00000559974 OR52E4Q8NGH9 312 aa14.03□□□□□ -0.16
RABGGTA-212ENST00000559974 CSGALNACT1Q8TDX6 532 aa14.03□□□□□ -0.16
RABGGTA-212ENST00000559974 NXPE3Q969Y0 559 aa14.03□□□□□ -0.16
RABGGTA-212ENST00000559974 FCRL1Q96LA6 429 aa14.03□□□□□ -0.16
RABGGTA-212ENST00000559974 APOLD1Q96LR9 279 aa14.03□□□□□ -0.16
RABGGTA-212ENST00000559974 COQ10AQ96MF6 247 aa14.03□□□□□ -0.16
RABGGTA-212ENST00000559974 UGT2B28Q9BY64 529 aa14.03□□□□□ -0.16
RABGGTA-212ENST00000559974 KAT8Q9H7Z6 458 aaKnown RBP14.03□□□□□ -0.16
RABGGTA-212ENST00000559974 CAAP1Q9H8G2 361 aa14.03□□□□□ -0.16
RABGGTA-212ENST00000559974 SLC6A13Q9NSD5 602 aa14.03□□□□□ -0.16
RABGGTA-212ENST00000559974 SMPD3Q9NY59 655 aaPredicted RBP14.03□□□□□ -0.16
RABGGTA-212ENST00000559974 COL4A3Q01955 1670 aa14.02□□□□□ -0.16
RABGGTA-212ENST00000559974 FAM220BPB1ANY3 271 aa14.02□□□□□ -0.16
RABGGTA-212ENST00000559974 PRRT4C9JH25 899 aa14.02□□□□□ -0.16
RABGGTA-212ENST00000559974 E7EQ34 232 aa14.02□□□□□ -0.16
RABGGTA-212ENST00000559974 SPINT1O43278 529 aa14.02□□□□□ -0.16
RABGGTA-212ENST00000559974 DEAF1O75398 565 aaPredicted RBP14.02□□□□□ -0.16
RABGGTA-212ENST00000559974 SCELO95171 688 aa14.02□□□□□ -0.16
RABGGTA-212ENST00000559974 LAMP2P13473 410 aa14.02□□□□□ -0.16
RABGGTA-212ENST00000559974 ZNF23P17027 643 aa14.02□□□□□ -0.16
RABGGTA-212ENST00000559974 CD22P20273 847 aa14.02□□□□□ -0.16
RABGGTA-212ENST00000559974 BDKRB1P46663 353 aa14.02□□□□□ -0.16
RABGGTA-212ENST00000559974 RPS9P46781 194 aaKnown RBP14.02□□□□□ -0.16
RABGGTA-212ENST00000559974 SMAD4Q13485 552 aaKnown RBP14.02□□□□□ -0.16
RABGGTA-212ENST00000559974 MSANTD1Q6ZTZ1 278 aa14.02□□□□□ -0.16
RABGGTA-212ENST00000559974 SLC22A15Q8IZD6 547 aa14.02□□□□□ -0.16
RABGGTA-212ENST00000559974 TMEM132CQ8N3T6 1108 aa14.02□□□□□ -0.16
RABGGTA-212ENST00000559974 WDR20Q8TBZ3 569 aa14.02□□□□□ -0.16
RABGGTA-212ENST00000559974 SMARCD2Q92925 531 aa14.02□□□□□ -0.16
RABGGTA-212ENST00000559974 DGCR14Q96DF8 476 aaKnown RBP14.02□□□□□ -0.16
RABGGTA-212ENST00000559974 MED8Q96G25 268 aa14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms