RNA–Protein interactions for RNA: ENST00000559834.1

HDDC3-204, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,076 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-204ENST00000559834 VPS26AO75436 327 aa8.75□□□□□ -1.01
HDDC3-204ENST00000559834 NDUFS3O75489 264 aa8.75□□□□□ -1.01
HDDC3-204ENST00000559834 WFS1O76024 890 aa8.75□□□□□ -1.01
HDDC3-204ENST00000559834 SERPINA7P05543 415 aa8.75□□□□□ -1.01
HDDC3-204ENST00000559834 UQCRHP07919 91 aa8.75□□□□□ -1.01
HDDC3-204ENST00000559834 ICAM2P13598 275 aa8.75□□□□□ -1.01
HDDC3-204ENST00000559834 ELAVL4P26378 380 aaKnown RBP8.75□□□□□ -1.01
HDDC3-204ENST00000559834 CMPK1P30085 196 aa8.75□□□□□ -1.01
HDDC3-204ENST00000559834 EMP2P54851 167 aa8.75□□□□□ -1.01
HDDC3-204ENST00000559834 Q0VFX4 171 aa8.75□□□□□ -1.01
HDDC3-204ENST00000559834 INAQ16352 499 aa8.75□□□□□ -1.01
HDDC3-204ENST00000559834 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.75□□□□□ -1.01
HDDC3-204ENST00000559834 FBXO42Q6P3S6 717 aa8.75□□□□□ -1.01
HDDC3-204ENST00000559834 ZNF534Q76KX8 674 aa8.75□□□□□ -1.01
HDDC3-204ENST00000559834 SDCCAG8Q86SQ7 713 aaPredicted RBP8.75□□□□□ -1.01
HDDC3-204ENST00000559834 FJX1Q86VR8 437 aa8.75□□□□□ -1.01
HDDC3-204ENST00000559834 PRSS58Q8IYP2 241 aa8.75□□□□□ -1.01
HDDC3-204ENST00000559834 MPP5Q8N3R9 675 aa8.75□□□□□ -1.01
HDDC3-204ENST00000559834 METTL27Q8N6F8 245 aaPredicted RBP8.75□□□□□ -1.01
HDDC3-204ENST00000559834 CCDC89Q8N998 374 aa8.75□□□□□ -1.01
HDDC3-204ENST00000559834 OR2L3Q8NG85 312 aa8.75□□□□□ -1.01
HDDC3-204ENST00000559834 OR2A1Q8NGT9 310 aa8.75□□□□□ -1.01
HDDC3-204ENST00000559834 SUN3Q8TAQ9 357 aa8.75□□□□□ -1.01
HDDC3-204ENST00000559834 MVB12AQ96EY5 273 aa8.75□□□□□ -1.01
HDDC3-204ENST00000559834 CABS1Q96KC9 395 aa8.75□□□□□ -1.01
HDDC3-204ENST00000559834 ZNF778Q96MU6 729 aa8.75□□□□□ -1.01
HDDC3-204ENST00000559834 ZFYVE21Q9BQ24 234 aa8.75□□□□□ -1.01
HDDC3-204ENST00000559834 YIPF2Q9BWQ6 316 aa8.75□□□□□ -1.01
HDDC3-204ENST00000559834 CHRAC1Q9NRG0 131 aa8.75□□□□□ -1.01
HDDC3-204ENST00000559834 RAB6BQ9NRW1 208 aa8.75□□□□□ -1.01
HDDC3-204ENST00000559834 SPATA7Q9P0W8 599 aa8.75□□□□□ -1.01
HDDC3-204ENST00000559834 SUCOQ9UBS9 1254 aaKnown RBP8.75□□□□□ -1.01
HDDC3-204ENST00000559834 PACSIN2Q9UNF0 486 aaPredicted RBP8.75□□□□□ -1.01
HDDC3-204ENST00000559834 MRPS2Q9Y399 296 aaKnown RBP8.75□□□□□ -1.01
HDDC3-204ENST00000559834 ZGRF1Q86YA3 2104 aa8.75□□□□□ -1.01
HDDC3-204ENST00000559834 LOC105369274A0A096LPK9 316 aa8.74□□□□□ -1.01
HDDC3-204ENST00000559834 LOC102723532A0A0G2JNH3 316 aa8.74□□□□□ -1.01
HDDC3-204ENST00000559834 TCRBV7S2A1N4TA0A589 114 aa8.74□□□□□ -1.01
HDDC3-204ENST00000559834 IDSB3KWA1 339 aa8.74□□□□□ -1.01
HDDC3-204ENST00000559834 PRSS44E7EML9 344 aa8.74□□□□□ -1.01
HDDC3-204ENST00000559834 H3BMM5 538 aa8.74□□□□□ -1.01
HDDC3-204ENST00000559834 TXNDC9O14530 226 aa8.74□□□□□ -1.01
HDDC3-204ENST00000559834 LIASO43766 372 aa8.74□□□□□ -1.01
HDDC3-204ENST00000559834 BMP10O95393 424 aa8.74□□□□□ -1.01
HDDC3-204ENST00000559834 FTCDO95954 541 aa8.74□□□□□ -1.01
HDDC3-204ENST00000559834 CRYABP02511 175 aaKnown RBP8.74□□□□□ -1.01
HDDC3-204ENST00000559834 APRTP07741 180 aa8.74□□□□□ -1.01
HDDC3-204ENST00000559834 ANXA5P08758 320 aa8.74□□□□□ -1.01
HDDC3-204ENST00000559834 PRR35P0CG20 571 aa8.74□□□□□ -1.01
HDDC3-204ENST00000559834 PKMP14618 531 aaKnown RBP8.74□□□□□ -1.01
HDDC3-204ENST00000559834 FBLP22087 321 aaKnown RBP8.74□□□□□ -1.01
HDDC3-204ENST00000559834 RPS3P23396 243 aaKnown RBP eCLIP8.74□□□□□ -1.01
HDDC3-204ENST00000559834 HSD17B2P37059 387 aa8.74□□□□□ -1.01
HDDC3-204ENST00000559834 GRIA1P42261 906 aa8.74□□□□□ -1.01
HDDC3-204ENST00000559834 NPY2RP49146 381 aa8.74□□□□□ -1.01
HDDC3-204ENST00000559834 ART3Q13508 389 aa8.74□□□□□ -1.01
HDDC3-204ENST00000559834 SEMA3AQ14563 771 aa8.74□□□□□ -1.01
HDDC3-204ENST00000559834 ANKRD20A4Q4UJ75 823 aa8.74□□□□□ -1.01
HDDC3-204ENST00000559834 VWA2Q5GFL6 755 aa8.74□□□□□ -1.01
HDDC3-204ENST00000559834 SEL1L2Q5TEA6 688 aa8.74□□□□□ -1.01
HDDC3-204ENST00000559834 GARNL3Q5VVW2 1013 aa8.74□□□□□ -1.01
HDDC3-204ENST00000559834 ZNF324BQ6AW86 544 aaPredicted RBP8.74□□□□□ -1.01
HDDC3-204ENST00000559834 FRMPD2BQ6IN97 320 aa8.74□□□□□ -1.01
HDDC3-204ENST00000559834 MTFR2Q6P444 385 aa8.74□□□□□ -1.01
HDDC3-204ENST00000559834 CNSTQ6PJW8 725 aa8.74□□□□□ -1.01
HDDC3-204ENST00000559834 TMEM207Q6UWW9 146 aa8.74□□□□□ -1.01
HDDC3-204ENST00000559834 GFRALQ6UXV0 394 aa8.74□□□□□ -1.01
HDDC3-204ENST00000559834 C4orf22Q6V702 233 aa8.74□□□□□ -1.01
HDDC3-204ENST00000559834 RIPOR1Q6ZS17 1223 aa8.74□□□□□ -1.01
HDDC3-204ENST00000559834 RNF44Q7L0R7 432 aa8.74□□□□□ -1.01
HDDC3-204ENST00000559834 LDB1Q86U70 411 aaPredicted RBP8.74□□□□□ -1.01
HDDC3-204ENST00000559834 OR4N4Q8N0Y3 316 aa8.74□□□□□ -1.01
HDDC3-204ENST00000559834 DNAJB8Q8NHS0 232 aa8.74□□□□□ -1.01
HDDC3-204ENST00000559834 LKAAEAR1Q8TD35 194 aa8.74□□□□□ -1.01
HDDC3-204ENST00000559834 NR4A3Q92570 626 aa8.74□□□□□ -1.01
HDDC3-204ENST00000559834 C8orf44Q96CB5 159 aa8.74□□□□□ -1.01
HDDC3-204ENST00000559834 PHF12Q96QT6 1004 aa8.74□□□□□ -1.01
HDDC3-204ENST00000559834 TRIM56Q9BRZ2 755 aaKnown RBP8.74□□□□□ -1.01
HDDC3-204ENST00000559834 DPH7Q9BTV6 452 aa8.74□□□□□ -1.01
HDDC3-204ENST00000559834 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.74□□□□□ -1.01
HDDC3-204ENST00000559834 P2RY12Q9H244 342 aa8.74□□□□□ -1.01
HDDC3-204ENST00000559834 MRPS30Q9NP92 439 aaKnown RBP8.74□□□□□ -1.01
HDDC3-204ENST00000559834 C14orf105Q9NVL8 296 aa8.74□□□□□ -1.01
HDDC3-204ENST00000559834 RIC8BQ9NVN3 520 aa8.74□□□□□ -1.01
HDDC3-204ENST00000559834 BFARQ9NZS9 450 aa8.74□□□□□ -1.01
HDDC3-204ENST00000559834 PAK5Q9P286 719 aa8.74□□□□□ -1.01
HDDC3-204ENST00000559834 PTGFRNQ9P2B2 879 aa8.74□□□□□ -1.01
HDDC3-204ENST00000559834 TRPC4Q9UBN4 977 aa8.74□□□□□ -1.01
HDDC3-204ENST00000559834 DRG1Q9Y295 367 aaKnown RBP8.74□□□□□ -1.01
HDDC3-204ENST00000559834 REXO2Q9Y3B8 237 aaKnown RBP8.74□□□□□ -1.01
HDDC3-204ENST00000559834 KLF2Q9Y5W3 355 aaPredicted RBP8.74□□□□□ -1.01
HDDC3-204ENST00000559834 OR2A25A4D2G3 310 aa8.73□□□□□ -1.01
HDDC3-204ENST00000559834 ZNF839A8K0R7 811 aa8.73□□□□□ -1.01
HDDC3-204ENST00000559834 H0YGG7 62 aa8.73□□□□□ -1.01
HDDC3-204ENST00000559834 SNRNP200O75643 2136 aaKnown RBP8.73□□□□□ -1.01
HDDC3-204ENST00000559834 RASAL1O95294 804 aa8.73□□□□□ -1.01
HDDC3-204ENST00000559834 MATN4O95460 622 aa8.73□□□□□ -1.01
HDDC3-204ENST00000559834 HEXBP07686 556 aa8.73□□□□□ -1.01
HDDC3-204ENST00000559834 PSMB5P28074 263 aa8.73□□□□□ -1.01
HDDC3-204ENST00000559834 ATP5DP30049 168 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms