RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 SLC9B2Q86UD5 537 aa16.02■□□□□ 0.15
TPM1-219ENST00000559397 TCAIMQ8N3R3 496 aa16.02■□□□□ 0.15
TPM1-219ENST00000559397 FBXO15Q8NCQ5 510 aaPredicted RBP16.02■□□□□ 0.15
TPM1-219ENST00000559397 KLHL29Q96CT2 875 aa16.02■□□□□ 0.15
TPM1-219ENST00000559397 CXorf40BQ96DE9 158 aa16.02■□□□□ 0.15
TPM1-219ENST00000559397 PPP1R36Q96LQ0 422 aa16.02■□□□□ 0.15
TPM1-219ENST00000559397 APOLD1Q96LR9 279 aa16.02■□□□□ 0.15
TPM1-219ENST00000559397 TRIT1Q9H3H1 467 aaKnown RBP16.02■□□□□ 0.15
TPM1-219ENST00000559397 WWOXQ9NZC7 414 aa16.02■□□□□ 0.15
TPM1-219ENST00000559397 STK38LQ9Y2H1 464 aa16.02■□□□□ 0.15
TPM1-219ENST00000559397 FIS1Q9Y3D6 152 aa16.02■□□□□ 0.15
TPM1-219ENST00000559397 COLEC10Q9Y6Z7 277 aa16.02■□□□□ 0.15
TPM1-219ENST00000559397 U3KQA8 63 aa16.02■□□□□ 0.15
TPM1-219ENST00000559397 ZNF292O60281 2723 aa16.01■□□□□ 0.15
TPM1-219ENST00000559397 K7EPI3 171 aa16.01■□□□□ 0.15
TPM1-219ENST00000559397 MYO1CO00159 1063 aa16.01■□□□□ 0.15
TPM1-219ENST00000559397 OR7A17O14581 309 aa16.01■□□□□ 0.15
TPM1-219ENST00000559397 PPM1DO15297 605 aa16.01■□□□□ 0.15
TPM1-219ENST00000559397 FLRT2O43155 660 aa16.01■□□□□ 0.15
TPM1-219ENST00000559397 VIPP01282 170 aa16.01■□□□□ 0.15
TPM1-219ENST00000559397 MYF5P13349 255 aa16.01■□□□□ 0.15
TPM1-219ENST00000559397 NCF2P19878 526 aaPredicted RBP16.01■□□□□ 0.15
TPM1-219ENST00000559397 CYP2A7P20853 494 aa16.01■□□□□ 0.15
TPM1-219ENST00000559397 NDUFS1P28331 727 aa16.01■□□□□ 0.15
TPM1-219ENST00000559397 HNMTP50135 292 aa16.01■□□□□ 0.15
TPM1-219ENST00000559397 RASSF2P50749 326 aa16.01■□□□□ 0.15
TPM1-219ENST00000559397 PRKG2Q13237 762 aa16.01■□□□□ 0.15
TPM1-219ENST00000559397 GTF2H2Q13888 395 aa16.01■□□□□ 0.15
TPM1-219ENST00000559397 GTF2H2CQ6P1K8 395 aa16.01■□□□□ 0.15
TPM1-219ENST00000559397 MBOAT1Q6ZNC8 495 aa16.01■□□□□ 0.15
TPM1-219ENST00000559397 CHSY3Q70JA7 882 aa16.01■□□□□ 0.15
TPM1-219ENST00000559397 DCUN1D3Q8IWE4 304 aa16.01■□□□□ 0.15
TPM1-219ENST00000559397 MCOLN3Q8TDD5 553 aa16.01■□□□□ 0.15
TPM1-219ENST00000559397 ZFPM2Q8WW38 1151 aa16.01■□□□□ 0.15
TPM1-219ENST00000559397 NOL11Q9H8H0 719 aaKnown RBP16.01■□□□□ 0.15
TPM1-219ENST00000559397 ARL15Q9NXU5 204 aa16.01■□□□□ 0.15
TPM1-219ENST00000559397 KRT87PA6NCN2 255 aa16■□□□□ 0.15
TPM1-219ENST00000559397 SLC22A2O15244 555 aa16■□□□□ 0.15
TPM1-219ENST00000559397 RPN2P04844 631 aa16■□□□□ 0.15
TPM1-219ENST00000559397 UROSP10746 265 aa16■□□□□ 0.15
TPM1-219ENST00000559397 ADSLP30566 484 aaPredicted RBP16■□□□□ 0.15
TPM1-219ENST00000559397 ERVPABLB-1P60509 514 aa16■□□□□ 0.15
TPM1-219ENST00000559397 HHEXQ03014 270 aa16■□□□□ 0.15
TPM1-219ENST00000559397 RBBP7Q16576 425 aa16■□□□□ 0.15
TPM1-219ENST00000559397 ZXDCQ2QGD7 858 aaPredicted RBP16■□□□□ 0.15
TPM1-219ENST00000559397 PROX2Q3B8N5 592 aa16■□□□□ 0.15
TPM1-219ENST00000559397 FAM219BQ5XKK7 198 aa16■□□□□ 0.15
TPM1-219ENST00000559397 LARP4Q71RC2 724 aaKnown RBP eCLIP16■□□□□ 0.159e-10■□□□□ 8.2
TPM1-219ENST00000559397 EFL1Q7Z2Z2 1120 aaKnown RBP16■□□□□ 0.15
TPM1-219ENST00000559397 TRIM48Q8IWZ4 208 aa16■□□□□ 0.15
TPM1-219ENST00000559397 CHCHD4Q8N4Q1 142 aa16■□□□□ 0.15
TPM1-219ENST00000559397 TEX9Q8N6V9 391 aa16■□□□□ 0.15
TPM1-219ENST00000559397 AVL9Q8NBF6 648 aa16■□□□□ 0.15
TPM1-219ENST00000559397 OR52B6Q8NGF0 335 aa16■□□□□ 0.15
TPM1-219ENST00000559397 MAGEC3Q8TD91 643 aa16■□□□□ 0.15
TPM1-219ENST00000559397 TWIST2Q8WVJ9 160 aa16■□□□□ 0.15
TPM1-219ENST00000559397 C19orf60Q96EN9 201 aa16■□□□□ 0.15
TPM1-219ENST00000559397 CAMK1GQ96NX5 476 aa16■□□□□ 0.15
TPM1-219ENST00000559397 KCNA7Q96RP8 456 aa16■□□□□ 0.15
TPM1-219ENST00000559397 MENTQ9BUN1 341 aa16■□□□□ 0.15
TPM1-219ENST00000559397 TUBB1Q9H4B7 451 aa16■□□□□ 0.15
TPM1-219ENST00000559397 KIR3DX1Q9H7L2 352 aa16■□□□□ 0.15
TPM1-219ENST00000559397 OPTCQ9UBM4 332 aa16■□□□□ 0.15
TPM1-219ENST00000559397 POLG2Q9UHN1 485 aa16■□□□□ 0.15
TPM1-219ENST00000559397 TAGLN3Q9UI15 199 aa16■□□□□ 0.15
TPM1-219ENST00000559397 CAPN7Q9Y6W3 813 aa16■□□□□ 0.15
TPM1-219ENST00000559397 COL5A1P20908 1838 aaPredicted RBP16■□□□□ 0.15
TPM1-219ENST00000559397 STK16O75716 305 aa15.99■□□□□ 0.15
TPM1-219ENST00000559397 ENO1P06733 434 aaKnown RBP15.99■□□□□ 0.15
TPM1-219ENST00000559397 HIST1H2AGP0C0S8 130 aaPredicted RBP15.99■□□□□ 0.15
TPM1-219ENST00000559397 ESRRAP11474 423 aaPredicted RBP15.99■□□□□ 0.15
TPM1-219ENST00000559397 HIST1H2ADP20671 130 aa15.99■□□□□ 0.15
TPM1-219ENST00000559397 PTPN4P29074 926 aa15.99■□□□□ 0.15
TPM1-219ENST00000559397 SLC6A12P48065 614 aa15.99■□□□□ 0.15
TPM1-219ENST00000559397 TRAF3Q13114 568 aa15.99■□□□□ 0.15
TPM1-219ENST00000559397 KLF10Q13118 480 aa15.99■□□□□ 0.15
TPM1-219ENST00000559397 KRT33BQ14525 404 aa15.99■□□□□ 0.15
TPM1-219ENST00000559397 INAVAQ3KP66 663 aa15.99■□□□□ 0.15
TPM1-219ENST00000559397 STPG1Q5TH74 334 aa15.99■□□□□ 0.15
TPM1-219ENST00000559397 LETMD1Q6P1Q0 360 aa15.99■□□□□ 0.15
TPM1-219ENST00000559397 RBM12BQ8IXT5 1001 aaKnown RBP15.99■□□□□ 0.15
TPM1-219ENST00000559397 SETD7Q8WTS6 366 aaKnown RBP15.99■□□□□ 0.15
TPM1-219ENST00000559397 RAD51AP1Q96B01 352 aa15.99■□□□□ 0.15
TPM1-219ENST00000559397 FBXL8Q96CD0 374 aa15.99■□□□□ 0.15
TPM1-219ENST00000559397 HIST1H2AHQ96KK5 128 aa15.99■□□□□ 0.15
TPM1-219ENST00000559397 C3orf30Q96M34 536 aa15.99■□□□□ 0.15
TPM1-219ENST00000559397 NRTNQ99748 197 aa15.99■□□□□ 0.15
TPM1-219ENST00000559397 HIST1H2AJQ99878 128 aa15.99■□□□□ 0.15
TPM1-219ENST00000559397 H2AFJQ9BTM1 129 aa15.99■□□□□ 0.15
TPM1-219ENST00000559397 UCK1Q9HA47 277 aa15.99■□□□□ 0.15
TPM1-219ENST00000559397 RNF215Q9Y6U7 377 aa15.99■□□□□ 0.15
TPM1-219ENST00000559397 GOLGA4Q13439 2230 aaKnown RBP15.99■□□□□ 0.15
TPM1-219ENST00000559397 GIPC1O14908 333 aa15.99■□□□□ 0.15
TPM1-219ENST00000559397 PIP5K1BO14986 540 aa15.99■□□□□ 0.15
TPM1-219ENST00000559397 SH3BP5O60239 455 aa15.99■□□□□ 0.15
TPM1-219ENST00000559397 OR4F21O95013 312 aa15.99■□□□□ 0.15
TPM1-219ENST00000559397 OTCP00480 354 aa15.99■□□□□ 0.15
TPM1-219ENST00000559397 NQO1P15559 274 aaKnown RBP15.99■□□□□ 0.15
TPM1-219ENST00000559397 GLB1P16278 677 aa15.99■□□□□ 0.15
TPM1-219ENST00000559397 MAP4P27816 1152 aaKnown RBP15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms