RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 CAPN12Q6ZSI9 719 aa4.2□□□□□ -1.74
SNX1-205ENST00000559339 TTLL10Q6ZVT0 673 aa4.2□□□□□ -1.74
SNX1-205ENST00000559339 FRA10AC1Q70Z53 315 aa4.2□□□□□ -1.74
SNX1-205ENST00000559339 CYS1Q717R9 158 aa4.2□□□□□ -1.74
SNX1-205ENST00000559339 ZNF572Q7Z3I7 529 aaPredicted RBP4.2□□□□□ -1.74
SNX1-205ENST00000559339 PIWIL4Q7Z3Z4 852 aaKnown RBP4.2□□□□□ -1.74
SNX1-205ENST00000559339 ZNF605Q86T29 641 aa4.2□□□□□ -1.74
SNX1-205ENST00000559339 CTAGE6Q86UF2 777 aa4.2□□□□□ -1.74
SNX1-205ENST00000559339 ZC3HC1Q86WB0 502 aaKnown RBP4.2□□□□□ -1.74
SNX1-205ENST00000559339 CCDC25Q86WR0 208 aa4.2□□□□□ -1.74
SNX1-205ENST00000559339 IGDCC3Q8IVU1 814 aa4.2□□□□□ -1.74
SNX1-205ENST00000559339 CTAGE4Q8IX94 777 aa4.2□□□□□ -1.74
SNX1-205ENST00000559339 CTAGE3PQ8IX95 158 aa4.2□□□□□ -1.74
SNX1-205ENST00000559339 DSELQ8IZU8 1212 aa4.2□□□□□ -1.74
SNX1-205ENST00000559339 DNAJC22Q8N4W6 341 aa4.2□□□□□ -1.74
SNX1-205ENST00000559339 NKAPQ8N5F7 415 aaKnown RBP4.2□□□□□ -1.74
SNX1-205ENST00000559339 TBC1D19Q8N5T2 526 aa4.2□□□□□ -1.74
SNX1-205ENST00000559339 CEP112Q8N8E3 955 aa4.2□□□□□ -1.74
SNX1-205ENST00000559339 TTC29Q8NA56 475 aaPredicted RBP4.2□□□□□ -1.74
SNX1-205ENST00000559339 SLC38A9Q8NBW4 561 aa4.2□□□□□ -1.74
SNX1-205ENST00000559339 OR2A1Q8NGT9 310 aa4.2□□□□□ -1.74
SNX1-205ENST00000559339 GIMAP7Q8NHV1 300 aa4.2□□□□□ -1.74
SNX1-205ENST00000559339 FLVCR1-AS1Q8TAF5 88 aa4.2□□□□□ -1.74
SNX1-205ENST00000559339 FBXO25Q8TCJ0 367 aa4.2□□□□□ -1.74
SNX1-205ENST00000559339 CT55Q8WUE5 264 aa4.2□□□□□ -1.74
SNX1-205ENST00000559339 ANKRD7Q92527 254 aa4.2□□□□□ -1.74
SNX1-205ENST00000559339 TTC9Q92623 222 aa4.2□□□□□ -1.74
SNX1-205ENST00000559339 NACC2Q96BF6 587 aa4.2□□□□□ -1.74
SNX1-205ENST00000559339 LINGO1Q96FE5 620 aa4.2□□□□□ -1.74
SNX1-205ENST00000559339 TSPAN17Q96FV3 270 aa4.2□□□□□ -1.74
SNX1-205ENST00000559339 VPS50Q96JG6 964 aa4.2□□□□□ -1.74
SNX1-205ENST00000559339 PWWP2AQ96N64 755 aa4.2□□□□□ -1.74
SNX1-205ENST00000559339 IP6K3Q96PC2 410 aa4.2□□□□□ -1.74
SNX1-205ENST00000559339 PKP4Q99569 1192 aa4.2□□□□□ -1.74
SNX1-205ENST00000559339 SLC30A3Q99726 388 aa4.2□□□□□ -1.74
SNX1-205ENST00000559339 NRTNQ99748 197 aa4.2□□□□□ -1.74
SNX1-205ENST00000559339 CPNE1Q99829 537 aa4.2□□□□□ -1.74
SNX1-205ENST00000559339 ZFYVE21Q9BQ24 234 aa4.2□□□□□ -1.74
SNX1-205ENST00000559339 SELENOSQ9BQE4 189 aa4.2□□□□□ -1.74
SNX1-205ENST00000559339 DPH7Q9BTV6 452 aa4.2□□□□□ -1.74
SNX1-205ENST00000559339 CHST8Q9H2A9 424 aa4.2□□□□□ -1.74
SNX1-205ENST00000559339 ADNPQ9H2P0 1102 aa4.2□□□□□ -1.74
SNX1-205ENST00000559339 RHOJQ9H4E5 214 aa4.2□□□□□ -1.74
SNX1-205ENST00000559339 GPAMQ9HCL2 828 aa4.2□□□□□ -1.74
SNX1-205ENST00000559339 FAM60AQ9NP50 221 aa4.2□□□□□ -1.74
SNX1-205ENST00000559339 CCDC177Q9NQR7 707 aaPredicted RBP4.2□□□□□ -1.74
SNX1-205ENST00000559339 CUTCQ9NTM9 273 aa4.2□□□□□ -1.74
SNX1-205ENST00000559339 ABCF3Q9NUQ8 709 aa4.2□□□□□ -1.74
SNX1-205ENST00000559339 PCMTD2Q9NV79 361 aa4.2□□□□□ -1.74
SNX1-205ENST00000559339 EURLQ9NYK6 297 aa4.2□□□□□ -1.74
SNX1-205ENST00000559339 MOCS1Q9NZB8 636 aa4.2□□□□□ -1.74
SNX1-205ENST00000559339 IFT80Q9P2H3 777 aaPredicted RBP4.2□□□□□ -1.74
SNX1-205ENST00000559339 GALPQ9UBC7 116 aa4.2□□□□□ -1.74
SNX1-205ENST00000559339 TAC3Q9UHF0 121 aa4.2□□□□□ -1.74
SNX1-205ENST00000559339 IL17BQ9UHF5 180 aa4.2□□□□□ -1.74
SNX1-205ENST00000559339 TUBD1Q9UJT1 453 aa4.2□□□□□ -1.74
SNX1-205ENST00000559339 TCFL5Q9UL49 500 aa4.2□□□□□ -1.74
SNX1-205ENST00000559339 MAN2B2Q9Y2E5 1009 aa4.2□□□□□ -1.74
SNX1-205ENST00000559339 MED16Q9Y2X0 877 aa4.2□□□□□ -1.74
SNX1-205ENST00000559339 KLK4Q9Y5K2 254 aa4.2□□□□□ -1.74
SNX1-205ENST00000559339 HEMK1Q9Y5R4 338 aaPredicted RBP4.2□□□□□ -1.74
SNX1-205ENST00000559339 ADAMTS20P59510 1910 aa4.19□□□□□ -1.74
SNX1-205ENST00000559339 SPTA1P02549 2419 aa4.19□□□□□ -1.74
SNX1-205ENST00000559339 A0A0J9YVX5 310 aa4.19□□□□□ -1.74
SNX1-205ENST00000559339 FAM95CA0A1B0GW59 222 aa4.19□□□□□ -1.74
SNX1-205ENST00000559339 A0A1W2PPV9 198 aa4.19□□□□□ -1.74
SNX1-205ENST00000559339 TCRBV9S1A1TA0A576 114 aa4.19□□□□□ -1.74
SNX1-205ENST00000559339 HYKKA2RU49 373 aa4.19□□□□□ -1.74
SNX1-205ENST00000559339 CDC14CA4D256 554 aa4.19□□□□□ -1.74
SNX1-205ENST00000559339 OR2A25A4D2G3 310 aa4.19□□□□□ -1.74
SNX1-205ENST00000559339 FITM1A5D6W6 292 aa4.19□□□□□ -1.74
SNX1-205ENST00000559339 PEX12O00623 359 aa4.19□□□□□ -1.74
SNX1-205ENST00000559339 TP73O15350 636 aa4.19□□□□□ -1.74
SNX1-205ENST00000559339 PRPF4O43172 522 aaKnown RBP eCLIP4.19□□□□□ -1.74
SNX1-205ENST00000559339 PRICKLE3O43900 615 aaPredicted RBP4.19□□□□□ -1.74
SNX1-205ENST00000559339 KLHL41O60662 606 aa4.19□□□□□ -1.74
SNX1-205ENST00000559339 GUCA1CO95843 209 aa4.19□□□□□ -1.74
SNX1-205ENST00000559339 ALBP02768 609 aa4.19□□□□□ -1.74
SNX1-205ENST00000559339 F7P08709 466 aaPredicted RBP4.19□□□□□ -1.74
SNX1-205ENST00000559339 ANXA5P08758 320 aa4.19□□□□□ -1.74
SNX1-205ENST00000559339 ERGP11308 486 aa4.19□□□□□ -1.74
SNX1-205ENST00000559339 STMN1P16949 149 aa4.19□□□□□ -1.74
SNX1-205ENST00000559339 ZNF37AP17032 561 aaPredicted RBP4.19□□□□□ -1.74
SNX1-205ENST00000559339 FDXRP22570 491 aa4.19□□□□□ -1.74
SNX1-205ENST00000559339 F8A1P23610 371 aa4.19□□□□□ -1.74
SNX1-205ENST00000559339 PSMB5P28074 263 aa4.19□□□□□ -1.74
SNX1-205ENST00000559339 GABRB3P28472 473 aa4.19□□□□□ -1.74
SNX1-205ENST00000559339 IMPA1P29218 277 aa4.19□□□□□ -1.74
SNX1-205ENST00000559339 PEBP1P30086 187 aaKnown RBP4.19□□□□□ -1.74
SNX1-205ENST00000559339 SSTR1P30872 391 aa4.19□□□□□ -1.74
SNX1-205ENST00000559339 SPRP35270 261 aaPredicted RBP4.19□□□□□ -1.74
SNX1-205ENST00000559339 RORAP35398 523 aa4.19□□□□□ -1.74
SNX1-205ENST00000559339 GP5P40197 560 aa4.19□□□□□ -1.74
SNX1-205ENST00000559339 FOLR3P41439 243 aa4.19□□□□□ -1.74
SNX1-205ENST00000559339 MAGEA4P43358 317 aa4.19□□□□□ -1.74
SNX1-205ENST00000559339 HNMTP50135 292 aa4.19□□□□□ -1.74
SNX1-205ENST00000559339 POLE2P56282 527 aa4.19□□□□□ -1.74
SNX1-205ENST00000559339 VSX2P58304 361 aaPredicted RBP4.19□□□□□ -1.74
SNX1-205ENST00000559339 RPS15AP62244 130 aaKnown RBP4.19□□□□□ -1.74
SNX1-205ENST00000559339 TBPL1P62380 186 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms