RNA–Protein interactions for RNA: ENST00000559100.1

GABPB1-209, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-209ENST00000559100 SMARCAL1Q9NZC9 954 aa2.17□□□□□ -2.06
GABPB1-209ENST00000559100 ACTR3BQ9P1U1 418 aa2.17□□□□□ -2.06
GABPB1-209ENST00000559100 PTGFRNQ9P2B2 879 aa2.17□□□□□ -2.06
GABPB1-209ENST00000559100 MAD2L2Q9UI95 211 aa2.17□□□□□ -2.06
GABPB1-209ENST00000559100 SH3BGRL2Q9UJC5 107 aa2.17□□□□□ -2.06
GABPB1-209ENST00000559100 GPR132Q9UNW8 380 aa2.17□□□□□ -2.06
GABPB1-209ENST00000559100 PIN4Q9Y237 131 aaKnown RBP2.17□□□□□ -2.06
GABPB1-209ENST00000559100 WDR83OSQ9Y284 106 aa2.17□□□□□ -2.06
GABPB1-209ENST00000559100 EXOC6BQ9Y2D4 811 aa2.17□□□□□ -2.06
GABPB1-209ENST00000559100 RPH3AQ9Y2J0 694 aaPredicted RBP2.17□□□□□ -2.06
GABPB1-209ENST00000559100 PCDH11YQ9BZA8 1340 aa2.17□□□□□ -2.06
GABPB1-209ENST00000559100 IGLV5-37A0A075B6J1 123 aa2.16□□□□□ -2.06
GABPB1-209ENST00000559100 A0A1W2PPK0 400 aa2.16□□□□□ -2.06
GABPB1-209ENST00000559100 ILVBLA1L0T0 632 aa2.16□□□□□ -2.06
GABPB1-209ENST00000559100 WDR91A4D1P6 747 aa2.16□□□□□ -2.06
GABPB1-209ENST00000559100 FAM149AA5PLN7 773 aa2.16□□□□□ -2.06
GABPB1-209ENST00000559100 C5orf51A6NDU8 294 aa2.16□□□□□ -2.06
GABPB1-209ENST00000559100 ARHGAP42A6NI28 874 aa2.16□□□□□ -2.06
GABPB1-209ENST00000559100 HNRNPCL2B2RXH8 293 aa2.16□□□□□ -2.06
GABPB1-209ENST00000559100 TMEM150CB9EJG8 249 aa2.16□□□□□ -2.06
GABPB1-209ENST00000559100 PRSS46E5RG02 174 aa2.16□□□□□ -2.06
GABPB1-209ENST00000559100 E9PI62 339 aa2.16□□□□□ -2.06
GABPB1-209ENST00000559100 F8VVB4 439 aa2.16□□□□□ -2.06
GABPB1-209ENST00000559100 F8VWA3 439 aa2.16□□□□□ -2.06
GABPB1-209ENST00000559100 MPHOSPH10O00566 681 aaKnown RBP2.16□□□□□ -2.06
GABPB1-209ENST00000559100 PPEF2O14830 753 aa2.16□□□□□ -2.06
GABPB1-209ENST00000559100 ARPC2O15144 300 aa2.16□□□□□ -2.06
GABPB1-209ENST00000559100 WISP2O76076 250 aa2.16□□□□□ -2.06
GABPB1-209ENST00000559100 PMS2P2O95744 297 aa2.16□□□□□ -2.06
GABPB1-209ENST00000559100 WDPCPO95876 746 aa2.16□□□□□ -2.06
GABPB1-209ENST00000559100 GLUD1P00367 558 aa2.16□□□□□ -2.06
GABPB1-209ENST00000559100 SLPIP03973 132 aa2.16□□□□□ -2.06
GABPB1-209ENST00000559100 ABHD2P08910 425 aa2.16□□□□□ -2.06
GABPB1-209ENST00000559100 LINC00271P0C7V0 271 aa2.16□□□□□ -2.06
GABPB1-209ENST00000559100 EZRP15311 586 aaKnown RBP2.16□□□□□ -2.06
GABPB1-209ENST00000559100 ARF4P18085 180 aaPredicted RBP2.16□□□□□ -2.06
GABPB1-209ENST00000559100 NR1D1P20393 614 aa2.16□□□□□ -2.06
GABPB1-209ENST00000559100 IL10P22301 178 aa2.16□□□□□ -2.06
GABPB1-209ENST00000559100 AHCYP23526 432 aa2.16□□□□□ -2.06
GABPB1-209ENST00000559100 HOXA11P31270 313 aaPredicted RBP2.16□□□□□ -2.06
GABPB1-209ENST00000559100 SFTPDP35247 375 aa2.16□□□□□ -2.06
GABPB1-209ENST00000559100 CETN2P41208 172 aa2.16□□□□□ -2.06
GABPB1-209ENST00000559100 IER3P46695 156 aa2.16□□□□□ -2.06
GABPB1-209ENST00000559100 RPL21P46778 160 aaKnown RBP2.16□□□□□ -2.06
GABPB1-209ENST00000559100 RABIFP47224 123 aa2.16□□□□□ -2.06
GABPB1-209ENST00000559100 CDX1P47902 265 aaPredicted RBP2.16□□□□□ -2.06
GABPB1-209ENST00000559100 ARCN1P48444 511 aaKnown RBP2.16□□□□□ -2.06
GABPB1-209ENST00000559100 GLUD2P49448 558 aa2.16□□□□□ -2.06
GABPB1-209ENST00000559100 NR0B1P51843 470 aaKnown RBP2.16□□□□□ -2.06
GABPB1-209ENST00000559100 THOP1P52888 689 aa2.16□□□□□ -2.06
GABPB1-209ENST00000559100 ATXN3P54252 364 aaPredicted RBP2.16□□□□□ -2.06
GABPB1-209ENST00000559100 DVL1P1P54792 670 aaPredicted RBP2.16□□□□□ -2.06
GABPB1-209ENST00000559100 UCP2P55851 309 aa2.16□□□□□ -2.06
GABPB1-209ENST00000559100 HSD17B7P56937 341 aa2.16□□□□□ -2.06
GABPB1-209ENST00000559100 MAT1AQ00266 395 aaKnown RBP2.16□□□□□ -2.06
GABPB1-209ENST00000559100 BNC1Q01954 994 aa2.16□□□□□ -2.06
GABPB1-209ENST00000559100 RELQ04864 619 aaPredicted RBP2.16□□□□□ -2.06
GABPB1-209ENST00000559100 MBTD1Q05BQ5 628 aa2.16□□□□□ -2.06
GABPB1-209ENST00000559100 KLC1Q07866 573 aa2.16□□□□□ -2.06
GABPB1-209ENST00000559100 IL10RBQ08334 325 aa2.16□□□□□ -2.06
GABPB1-209ENST00000559100 Q0VFX4 171 aa2.16□□□□□ -2.06
GABPB1-209ENST00000559100 CETN1Q12798 172 aa2.16□□□□□ -2.06
GABPB1-209ENST00000559100 MFAP5Q13361 173 aa2.16□□□□□ -2.06
GABPB1-209ENST00000559100 SF3B4Q15427 424 aaKnown RBP eCLIP2.16□□□□□ -2.06
GABPB1-209ENST00000559100 PTPN14Q15678 1187 aa2.16□□□□□ -2.06
GABPB1-209ENST00000559100 UGT3A2Q3SY77 523 aa2.16□□□□□ -2.06
GABPB1-209ENST00000559100 TAF1BQ53T94 588 aaPredicted RBP2.16□□□□□ -2.06
GABPB1-209ENST00000559100 CYP4A22Q5TCH4 519 aa2.16□□□□□ -2.06
GABPB1-209ENST00000559100 KCTD11Q693B1 232 aa2.16□□□□□ -2.06
GABPB1-209ENST00000559100 C8orf82Q6P1X6 216 aaPredicted RBP2.16□□□□□ -2.06
GABPB1-209ENST00000559100 TTC27Q6P3X3 843 aa2.16□□□□□ -2.06
GABPB1-209ENST00000559100 PRSS55Q6UWB4 352 aaPredicted RBP2.16□□□□□ -2.06
GABPB1-209ENST00000559100 BTNL8Q6UX41 500 aa2.16□□□□□ -2.06
GABPB1-209ENST00000559100 MFSD7Q6UXD7 560 aa2.16□□□□□ -2.06
GABPB1-209ENST00000559100 ZNF517Q6ZMY9 492 aaPredicted RBP2.16□□□□□ -2.06
GABPB1-209ENST00000559100 PIWIL4Q7Z3Z4 852 aaKnown RBP2.16□□□□□ -2.06
GABPB1-209ENST00000559100 PRSS42Q7Z5A4 293 aa2.16□□□□□ -2.06
GABPB1-209ENST00000559100 PIP4P1Q86T03 277 aa2.16□□□□□ -2.06
GABPB1-209ENST00000559100 ZNF410Q86VK4 478 aa2.16□□□□□ -2.06
GABPB1-209ENST00000559100 NUDT13Q86X67 352 aa2.16□□□□□ -2.06
GABPB1-209ENST00000559100 MEX3DQ86XN8 651 aaKnown RBP2.16□□□□□ -2.06
GABPB1-209ENST00000559100 KMT5CQ86Y97 462 aa2.16□□□□□ -2.06
GABPB1-209ENST00000559100 TMEM126BQ8IUX1 230 aa2.16□□□□□ -2.06
GABPB1-209ENST00000559100 SIAH3Q8IW03 269 aa2.16□□□□□ -2.06
GABPB1-209ENST00000559100 KLHDC8AQ8IYD2 350 aa2.16□□□□□ -2.06
GABPB1-209ENST00000559100 DCP1BQ8IZD4 617 aaKnown RBP2.16□□□□□ -2.06
GABPB1-209ENST00000559100 THEM5Q8N1Q8 247 aa2.16□□□□□ -2.06
GABPB1-209ENST00000559100 ARL6IP6Q8N6S5 226 aa2.16□□□□□ -2.06
GABPB1-209ENST00000559100 LMNTD1Q8N9Z9 388 aa2.16□□□□□ -2.06
GABPB1-209ENST00000559100 SMYD1Q8NB12 490 aa2.16□□□□□ -2.06
GABPB1-209ENST00000559100 NEXN-AS1Q8NBZ9 246 aa2.16□□□□□ -2.06
GABPB1-209ENST00000559100 CLEC1AQ8NC01 280 aa2.16□□□□□ -2.06
GABPB1-209ENST00000559100 LEMD2Q8NC56 503 aa2.16□□□□□ -2.06
GABPB1-209ENST00000559100 LILRB1Q8NHL6 650 aaPredicted RBP2.16□□□□□ -2.06
GABPB1-209ENST00000559100 EXOC6Q8TAG9 804 aa2.16□□□□□ -2.06
GABPB1-209ENST00000559100 RNASE8Q8TDE3 154 aaKnown RBP2.16□□□□□ -2.06
GABPB1-209ENST00000559100 CKAP2Q8WWK9 683 aa2.16□□□□□ -2.06
GABPB1-209ENST00000559100 PIGBQ92521 554 aa2.16□□□□□ -2.06
GABPB1-209ENST00000559100 P2RX5Q93086 422 aa2.16□□□□□ -2.06
GABPB1-209ENST00000559100 SNRNP40Q96DI7 357 aaKnown RBP2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms