RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 C6orf10Q5SRN2 563 aa12.54□□□□□ -0.4
SMAD3-207ENST00000558763 LIPJQ5W064 366 aa12.54□□□□□ -0.4
SMAD3-207ENST00000558763 FRG2Q64ET8 278 aa12.54□□□□□ -0.4
SMAD3-207ENST00000558763 AAGABQ6PD74 315 aa12.54□□□□□ -0.4
SMAD3-207ENST00000558763 AMZ2Q86W34 360 aa12.54□□□□□ -0.4
SMAD3-207ENST00000558763 HORMAD1Q86X24 394 aa12.54□□□□□ -0.4
SMAD3-207ENST00000558763 RNF175Q8N4F7 328 aa12.54□□□□□ -0.4
SMAD3-207ENST00000558763 FBXL6Q8N531 539 aa12.54□□□□□ -0.4
SMAD3-207ENST00000558763 MINDY1Q8N5J2 469 aa12.54□□□□□ -0.4
SMAD3-207ENST00000558763 SELENOMQ8WWX9 145 aa12.54□□□□□ -0.4
SMAD3-207ENST00000558763 PYDC1Q8WXC3 89 aa12.54□□□□□ -0.4
SMAD3-207ENST00000558763 MTFMTQ96DP5 389 aaKnown RBP12.54□□□□□ -0.4
SMAD3-207ENST00000558763 FRG2BQ96QU4 278 aa12.54□□□□□ -0.4
SMAD3-207ENST00000558763 SLC17A9Q9BYT1 436 aa12.54□□□□□ -0.4
SMAD3-207ENST00000558763 C6orf106Q9H6K1 298 aaPredicted RBP12.54□□□□□ -0.4
SMAD3-207ENST00000558763 PRMT8Q9NR22 394 aaPredicted RBP12.54□□□□□ -0.4
SMAD3-207ENST00000558763 C1orf109Q9NX04 203 aa12.54□□□□□ -0.4
SMAD3-207ENST00000558763 WSB2Q9NYS7 404 aaPredicted RBP12.54□□□□□ -0.4
SMAD3-207ENST00000558763 SLAMF8Q9P0V8 285 aa12.54□□□□□ -0.4
SMAD3-207ENST00000558763 SUCOQ9UBS9 1254 aaKnown RBP12.54□□□□□ -0.4
SMAD3-207ENST00000558763 DLGAP4Q9Y2H0 992 aa12.54□□□□□ -0.4
SMAD3-207ENST00000558763 DNAH14Q0VDD8 3507 aa12.53□□□□□ -0.4
SMAD3-207ENST00000558763 EML5Q05BV3 1969 aa12.53□□□□□ -0.4
SMAD3-207ENST00000558763 FKBP6O75344 327 aa12.53□□□□□ -0.4
SMAD3-207ENST00000558763 ERGP11308 486 aa12.53□□□□□ -0.4
SMAD3-207ENST00000558763 SLC2A4P14672 509 aa12.53□□□□□ -0.4
SMAD3-207ENST00000558763 CASP2P42575 452 aa12.53□□□□□ -0.4
SMAD3-207ENST00000558763 SLC7A2P52569 658 aa12.53□□□□□ -0.4
SMAD3-207ENST00000558763 TAP2Q03519 686 aa12.53□□□□□ -0.4
SMAD3-207ENST00000558763 SGCGQ13326 291 aa12.53□□□□□ -0.4
SMAD3-207ENST00000558763 USP39Q53GS9 565 aaKnown RBP12.53□□□□□ -0.4
SMAD3-207ENST00000558763 METRNLQ641Q3 311 aa12.53□□□□□ -0.4
SMAD3-207ENST00000558763 ADNP2Q6IQ32 1131 aa12.53□□□□□ -0.4
SMAD3-207ENST00000558763 UNC5DQ6UXZ4 953 aa12.53□□□□□ -0.4
SMAD3-207ENST00000558763 MAMSTRQ6ZN01 415 aa12.53□□□□□ -0.4
SMAD3-207ENST00000558763 C1orf210Q8IVY1 113 aa12.53□□□□□ -0.4
SMAD3-207ENST00000558763 SLC15A3Q8IY34 581 aa12.53□□□□□ -0.4
SMAD3-207ENST00000558763 PCYOX1LQ8NBM8 494 aa12.53□□□□□ -0.4
SMAD3-207ENST00000558763 OR9A1PQ8NGU1 263 aa12.53□□□□□ -0.4
SMAD3-207ENST00000558763 C11orf24Q96F05 449 aaPredicted RBP12.53□□□□□ -0.4
SMAD3-207ENST00000558763 MED8Q96G25 268 aa12.53□□□□□ -0.4
SMAD3-207ENST00000558763 FCRL1Q96LA6 429 aa12.53□□□□□ -0.4
SMAD3-207ENST00000558763 MENTQ9BUN1 341 aa12.53□□□□□ -0.4
SMAD3-207ENST00000558763 FZD3Q9NPG1 666 aa12.53□□□□□ -0.4
SMAD3-207ENST00000558763 SNX6Q9UNH7 406 aa12.53□□□□□ -0.4
SMAD3-207ENST00000558763 C15orf41Q9Y2V0 281 aa12.53□□□□□ -0.4
SMAD3-207ENST00000558763 DMDP11532 3685 aa12.52□□□□□ -0.4
SMAD3-207ENST00000558763 GPR89AB7ZAQ6 455 aa12.52□□□□□ -0.4
SMAD3-207ENST00000558763 H0YIV9 168 aa12.52□□□□□ -0.4
SMAD3-207ENST00000558763 TNFRSF10AO00220 468 aa12.52□□□□□ -0.4
SMAD3-207ENST00000558763 SLC31A1O15431 190 aa12.52□□□□□ -0.4
SMAD3-207ENST00000558763 CEACAM5P06731 702 aa12.52□□□□□ -0.4
SMAD3-207ENST00000558763 GPR89BP0CG08 455 aa12.52□□□□□ -0.4
SMAD3-207ENST00000558763 MYCLP1P12525 358 aaPredicted RBP12.52□□□□□ -0.4
SMAD3-207ENST00000558763 BCKDHAP12694 445 aa12.52□□□□□ -0.4
SMAD3-207ENST00000558763 OXTRP30559 389 aa12.52□□□□□ -0.4
SMAD3-207ENST00000558763 HALP42357 657 aa12.52□□□□□ -0.4
SMAD3-207ENST00000558763 FNTBP49356 437 aa12.52□□□□□ -0.4
SMAD3-207ENST00000558763 KCNK10P57789 538 aa12.52□□□□□ -0.4
SMAD3-207ENST00000558763 IRF8Q02556 426 aa12.52□□□□□ -0.4
SMAD3-207ENST00000558763 CSTF1Q05048 431 aaKnown RBP12.52□□□□□ -0.4
SMAD3-207ENST00000558763 DMPKQ09013 629 aa12.52□□□□□ -0.4
SMAD3-207ENST00000558763 PRKG2Q13237 762 aa12.52□□□□□ -0.4
SMAD3-207ENST00000558763 CAPRIN1Q14444 709 aaKnown RBP12.52□□□□□ -0.4
SMAD3-207ENST00000558763 GRHL2Q6ISB3 625 aa12.52□□□□□ -0.4
SMAD3-207ENST00000558763 SLCO4C1Q6ZQN7 724 aa12.52□□□□□ -0.4
SMAD3-207ENST00000558763 HOMEZQ8IX15 550 aa12.52□□□□□ -0.4
SMAD3-207ENST00000558763 KIAA2013Q8IYS2 634 aa12.52□□□□□ -0.4
SMAD3-207ENST00000558763 DPP10Q8N608 796 aa12.52□□□□□ -0.4
SMAD3-207ENST00000558763 DEFB119Q8N690 84 aa12.52□□□□□ -0.4
SMAD3-207ENST00000558763 DTWD2Q8NBA8 298 aa12.52□□□□□ -0.4
SMAD3-207ENST00000558763 OR5AR1Q8NGP9 310 aa12.52□□□□□ -0.4
SMAD3-207ENST00000558763 NEIL2Q969S2 332 aa12.52□□□□□ -0.4
SMAD3-207ENST00000558763 LRRC58Q96CX6 371 aa12.52□□□□□ -0.4
SMAD3-207ENST00000558763 ASB9Q96DX5 294 aa12.52□□□□□ -0.4
SMAD3-207ENST00000558763 WDR34Q96EX3 536 aa12.52□□□□□ -0.4
SMAD3-207ENST00000558763 SPACA7Q96KW9 195 aa12.52□□□□□ -0.4
SMAD3-207ENST00000558763 NRTNQ99748 197 aa12.52□□□□□ -0.4
SMAD3-207ENST00000558763 ELOVL6Q9H5J4 265 aa12.52□□□□□ -0.4
SMAD3-207ENST00000558763 CMTM6Q9NX76 183 aa12.52□□□□□ -0.4
SMAD3-207ENST00000558763 ADA2Q9NZK5 511 aa12.52□□□□□ -0.4
SMAD3-207ENST00000558763 STOML1Q9UBI4 398 aa12.52□□□□□ -0.4
SMAD3-207ENST00000558763 SLC17A4Q9Y2C5 497 aa12.52□□□□□ -0.4
SMAD3-207ENST00000558763 PCDHA9Q9Y5H5 950 aa12.52□□□□□ -0.4
SMAD3-207ENST00000558763 DNMT3AQ9Y6K1 912 aaPredicted RBP12.52□□□□□ -0.4
SMAD3-207ENST00000558763 NPPBP16860 134 aa12.52□□□□□ -0.41
SMAD3-207ENST00000558763 VARSP26640 1264 aaKnown RBP12.52□□□□□ -0.41
SMAD3-207ENST00000558763 SESN3P58005 492 aa12.52□□□□□ -0.41
SMAD3-207ENST00000558763 FOXM1Q08050 763 aa12.52□□□□□ -0.41
SMAD3-207ENST00000558763 FLOT2Q14254 428 aa12.52□□□□□ -0.41
SMAD3-207ENST00000558763 CCDC6Q16204 474 aa12.52□□□□□ -0.41
SMAD3-207ENST00000558763 IMPG1Q17R60 797 aa12.52□□□□□ -0.41
SMAD3-207ENST00000558763 XKR6Q5GH73 641 aa12.52□□□□□ -0.41
SMAD3-207ENST00000558763 MAML2Q8IZL2 1156 aaPredicted RBP12.52□□□□□ -0.41
SMAD3-207ENST00000558763 LIX1Q8N485 282 aa12.52□□□□□ -0.41
SMAD3-207ENST00000558763 HIPK4Q8NE63 616 aa12.52□□□□□ -0.41
SMAD3-207ENST00000558763 SLC26A7Q8TE54 656 aa12.52□□□□□ -0.41
SMAD3-207ENST00000558763 SNX19Q92543 992 aa12.52□□□□□ -0.41
SMAD3-207ENST00000558763 APIPQ96GX9 242 aa12.52□□□□□ -0.41
SMAD3-207ENST00000558763 MAGEB10Q96LZ2 347 aaPredicted RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms