RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 PLEKHA6Q9Y2H5 1048 aa13.66□□□□□ -0.22
SPG11-210ENST00000558319 ZC3H13Q5T200 1668 aaKnown RBP13.66□□□□□ -0.22
SPG11-210ENST00000558319 A0A0J9YVX5 310 aa13.65□□□□□ -0.22
SPG11-210ENST00000558319 PRMT3O60678 531 aa13.65□□□□□ -0.22
SPG11-210ENST00000558319 GRM5P41594 1212 aa13.65□□□□□ -0.22
SPG11-210ENST00000558319 MLLT3P42568 568 aaPredicted RBP13.65□□□□□ -0.22
SPG11-210ENST00000558319 PSEN1P49768 467 aa13.65□□□□□ -0.22
SPG11-210ENST00000558319 MLLT10P55197 1068 aa13.65□□□□□ -0.22
SPG11-210ENST00000558319 SPIN3Q5JUX0 258 aa13.65□□□□□ -0.22
SPG11-210ENST00000558319 LRRN1Q6UXK5 716 aa13.65□□□□□ -0.22
SPG11-210ENST00000558319 TAPBPLQ9BX59 468 aa13.65□□□□□ -0.22
SPG11-210ENST00000558319 LDAHQ9H6V9 325 aa13.65□□□□□ -0.22
SPG11-210ENST00000558319 TBC1D14Q9P2M4 693 aa13.65□□□□□ -0.22
SPG11-210ENST00000558319 CMAHPQ9Y471 501 aa13.65□□□□□ -0.22
SPG11-210ENST00000558319 MAP3K8P41279 467 aa13.65□□□□□ -0.22
SPG11-210ENST00000558319 NCBP2P52298 156 aaKnown RBP eCLIP13.65□□□□□ -0.22
SPG11-210ENST00000558319 RHDQ02161 417 aa13.65□□□□□ -0.22
SPG11-210ENST00000558319 RPS27LQ71UM5 84 aaKnown RBP13.65□□□□□ -0.22
SPG11-210ENST00000558319 AMIGO1Q86WK6 493 aa13.65□□□□□ -0.22
SPG11-210ENST00000558319 KLHL36Q8N4N3 616 aa13.65□□□□□ -0.22
SPG11-210ENST00000558319 CANT1Q8WVQ1 401 aa13.65□□□□□ -0.22
SPG11-210ENST00000558319 FCGR1BQ92637 280 aa13.65□□□□□ -0.22
SPG11-210ENST00000558319 HSFY1Q96LI6 401 aa13.65□□□□□ -0.22
SPG11-210ENST00000558319 DHX33Q9H6R0 707 aaKnown RBP13.65□□□□□ -0.22
SPG11-210ENST00000558319 SEC61A2Q9H9S3 476 aa13.65□□□□□ -0.22
SPG11-210ENST00000558319 TAS2R3Q9NYW6 316 aa13.65□□□□□ -0.22
SPG11-210ENST00000558319 TMEM98Q9Y2Y6 226 aa13.65□□□□□ -0.22
SPG11-210ENST00000558319 HCRTO43612 131 aa13.65□□□□□ -0.22
SPG11-210ENST00000558319 RPL35P42766 123 aaKnown RBP13.65□□□□□ -0.22
SPG11-210ENST00000558319 MAGEA11P43364 429 aa13.65□□□□□ -0.22
SPG11-210ENST00000558319 COL9A3Q14050 684 aaPredicted RBP13.65□□□□□ -0.22
SPG11-210ENST00000558319 XKR4Q5GH76 650 aa13.65□□□□□ -0.22
SPG11-210ENST00000558319 SLC15A3Q8IY34 581 aa13.65□□□□□ -0.22
SPG11-210ENST00000558319 OR10G2Q8NGC3 310 aa13.65□□□□□ -0.22
SPG11-210ENST00000558319 CAPNS2Q96L46 248 aa13.65□□□□□ -0.22
SPG11-210ENST00000558319 PDZD7Q9H5P4 517 aa13.65□□□□□ -0.22
SPG11-210ENST00000558319 SALL4Q9UJQ4 1053 aa13.65□□□□□ -0.22
SPG11-210ENST00000558319 M0QX08 132 aa13.65□□□□□ -0.22
SPG11-210ENST00000558319 GATMP50440 423 aa13.65□□□□□ -0.22
SPG11-210ENST00000558319 TXNDC8Q6A555 127 aa13.65□□□□□ -0.22
SPG11-210ENST00000558319 ARL9Q6T311 187 aa13.65□□□□□ -0.22
SPG11-210ENST00000558319 FBXL20Q96IG2 436 aa13.65□□□□□ -0.22
SPG11-210ENST00000558319 BTN2A3PQ96KV6 586 aa13.65□□□□□ -0.22
SPG11-210ENST00000558319 GATA5Q9BWX5 397 aaPredicted RBP13.65□□□□□ -0.22
SPG11-210ENST00000558319 AGXT2Q9BYV1 514 aa13.65□□□□□ -0.22
SPG11-210ENST00000558319 MRPS30Q9NP92 439 aaKnown RBP13.65□□□□□ -0.22
SPG11-210ENST00000558319 A0A1B0GVT2 93 aa13.65□□□□□ -0.22
SPG11-210ENST00000558319 PPP1R11O60927 126 aaPredicted RBP13.65□□□□□ -0.22
SPG11-210ENST00000558319 CDC123O75794 336 aaPredicted RBP13.65□□□□□ -0.22
SPG11-210ENST00000558319 LDOC1O95751 146 aaPredicted RBP13.65□□□□□ -0.22
SPG11-210ENST00000558319 CDH1P12830 882 aa13.65□□□□□ -0.22
SPG11-210ENST00000558319 ZNF823P16415 610 aa13.65□□□□□ -0.22
SPG11-210ENST00000558319 TAC4Q86UU9 113 aa13.65□□□□□ -0.22
SPG11-210ENST00000558319 TMC8Q8IU68 726 aa13.65□□□□□ -0.22
SPG11-210ENST00000558319 THAP3Q8WTV1 239 aaPredicted RBP13.65□□□□□ -0.22
SPG11-210ENST00000558319 SGCDQ92629 289 aa13.65□□□□□ -0.22
SPG11-210ENST00000558319 WDR77Q9BQA1 342 aaPredicted RBP13.65□□□□□ -0.22
SPG11-210ENST00000558319 SLC7A8Q9UHI5 535 aa13.65□□□□□ -0.22
SPG11-210ENST00000558319 RIC1Q4ADV7 1423 aa13.65□□□□□ -0.22
SPG11-210ENST00000558319 A0A1W2PRQ8 180 aa13.65□□□□□ -0.23
SPG11-210ENST00000558319 TVP23AA6NH52 213 aa13.65□□□□□ -0.23
SPG11-210ENST00000558319 ELOA3DA6NLF2 546 aaPredicted RBP13.65□□□□□ -0.23
SPG11-210ENST00000558319 SLC38A8A6NNN8 435 aa13.65□□□□□ -0.23
SPG11-210ENST00000558319 GPR25O00155 361 aa13.65□□□□□ -0.23
SPG11-210ENST00000558319 CH25HO95992 272 aa13.65□□□□□ -0.23
SPG11-210ENST00000558319 ELOA3BQ3SY89 546 aa13.65□□□□□ -0.23
SPG11-210ENST00000558319 MED27Q6P2C8 311 aa13.65□□□□□ -0.23
SPG11-210ENST00000558319 PLPPR4Q7Z2D5 763 aa13.65□□□□□ -0.23
SPG11-210ENST00000558319 ELOA3Q8NG57 546 aa13.65□□□□□ -0.23
SPG11-210ENST00000558319 TMBIM1Q969X1 311 aa13.65□□□□□ -0.23
SPG11-210ENST00000558319 KCTD5Q9NXV2 234 aa13.65□□□□□ -0.23
SPG11-210ENST00000558319 OPN1SWP03999 348 aa13.64□□□□□ -0.23
SPG11-210ENST00000558319 C8AP07357 584 aa13.64□□□□□ -0.23
SPG11-210ENST00000558319 XRCC1P18887 633 aaPredicted RBP13.64□□□□□ -0.23
SPG11-210ENST00000558319 DGKGP49619 791 aa13.64□□□□□ -0.23
SPG11-210ENST00000558319 PDX1P52945 283 aa13.64□□□□□ -0.23
SPG11-210ENST00000558319 DAG1Q14118 895 aa13.64□□□□□ -0.23
SPG11-210ENST00000558319 MEP1AQ16819 746 aa13.64□□□□□ -0.23
SPG11-210ENST00000558319 NLGN4XQ8N0W4 816 aa13.64□□□□□ -0.23
SPG11-210ENST00000558319 COX18Q8N8Q8 333 aa13.64□□□□□ -0.23
SPG11-210ENST00000558319 CARS2Q9HA77 564 aaKnown RBP13.64□□□□□ -0.23
SPG11-210ENST00000558319 ADAP2Q9NPF8 381 aa13.64□□□□□ -0.23
SPG11-210ENST00000558319 STK16O75716 305 aa13.64□□□□□ -0.23
SPG11-210ENST00000558319 DIRAS1O95057 198 aa13.64□□□□□ -0.23
SPG11-210ENST00000558319 TYRP1P17643 537 aa13.64□□□□□ -0.23
SPG11-210ENST00000558319 CLCN7P51798 805 aa13.64□□□□□ -0.23
SPG11-210ENST00000558319 NOGQ13253 232 aa13.64□□□□□ -0.23
SPG11-210ENST00000558319 NDUFA9Q16795 377 aa13.64□□□□□ -0.23
SPG11-210ENST00000558319 VARS2Q5ST30 1063 aaKnown RBP13.64□□□□□ -0.23
SPG11-210ENST00000558319 NXPE2Q96DL1 559 aa13.64□□□□□ -0.23
SPG11-210ENST00000558319 MRTO4Q9UKD2 239 aaKnown RBP13.64□□□□□ -0.23
SPG11-210ENST00000558319 LOC100130705A0A1B0GUX0 176 aa13.64□□□□□ -0.23
SPG11-210ENST00000558319 COL6A2P12110 1019 aa13.64□□□□□ -0.23
SPG11-210ENST00000558319 GKP32189 559 aa13.64□□□□□ -0.23
SPG11-210ENST00000558319 ENTPD1P49961 510 aa13.64□□□□□ -0.23
SPG11-210ENST00000558319 NKX2-5P52952 324 aaPredicted RBP13.64□□□□□ -0.23
SPG11-210ENST00000558319 C1QTNF8P60827 252 aa13.64□□□□□ -0.23
SPG11-210ENST00000558319 SFT2D3Q587I9 215 aa13.64□□□□□ -0.23
SPG11-210ENST00000558319 ZNF311Q5JNZ3 666 aa13.64□□□□□ -0.23
SPG11-210ENST00000558319 FSTL5Q8N475 847 aaPredicted RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms