RNA–Protein interactions for RNA: ENST00000558282.5

CSPG4P12-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

BASIC

Gene CSPG4P12, Length 4,853 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-201ENST00000558282 SLC22A10Q63ZE4 541 aa11.5□□□□□ -0.57
CSPG4P12-201ENST00000558282 RAB11FIP2Q7L804 512 aa11.5□□□□□ -0.57
CSPG4P12-201ENST00000558282 TRAPPC5Q8IUR0 188 aa11.5□□□□□ -0.57
CSPG4P12-201ENST00000558282 ZBTB2Q8N680 514 aa11.5□□□□□ -0.57
CSPG4P12-201ENST00000558282 OR5H6Q8NGV6 325 aa11.5□□□□□ -0.57
CSPG4P12-201ENST00000558282 ZNF358Q9NW07 568 aa11.5□□□□□ -0.57
CSPG4P12-201ENST00000558282 LYARQ9NX58 379 aaKnown RBP11.5□□□□□ -0.57
CSPG4P12-201ENST00000558282 FLRT1Q9NZU1 646 aa11.5□□□□□ -0.57
CSPG4P12-201ENST00000558282 ERVK-18Q9QC07 812 aa11.5□□□□□ -0.57
CSPG4P12-201ENST00000558282 ZDHHC2Q9UIJ5 367 aa11.5□□□□□ -0.57
CSPG4P12-201ENST00000558282 CPSF4LA6NMK7 179 aaKnown RBP11.49□□□□□ -0.57
CSPG4P12-201ENST00000558282 HOXA2O43364 376 aa11.49□□□□□ -0.57
CSPG4P12-201ENST00000558282 ICMTO60725 284 aa11.49□□□□□ -0.57
CSPG4P12-201ENST00000558282 CAP2P40123 477 aa11.49□□□□□ -0.57
CSPG4P12-201ENST00000558282 PRKCDQ05655 676 aa11.49□□□□□ -0.57
CSPG4P12-201ENST00000558282 DALRD3Q5D0E6 543 aaKnown RBP11.49□□□□□ -0.57
CSPG4P12-201ENST00000558282 C10orf62Q5T681 223 aaPredicted RBP11.49□□□□□ -0.57
CSPG4P12-201ENST00000558282 UBAP2Q5T6F2 1119 aaKnown RBP11.49□□□□□ -0.57
CSPG4P12-201ENST00000558282 CADM2Q8N3J6 435 aa11.49□□□□□ -0.57
CSPG4P12-201ENST00000558282 MCMBPQ9BTE3 642 aa11.49□□□□□ -0.57
CSPG4P12-201ENST00000558282 NPLQ9BXD5 320 aaPredicted RBP11.49□□□□□ -0.57
CSPG4P12-201ENST00000558282 SLC25A51Q9H1U9 297 aa11.49□□□□□ -0.57
CSPG4P12-201ENST00000558282 C3P01024 1663 aa11.49□□□□□ -0.57
CSPG4P12-201ENST00000558282 BCAS1O75363 584 aaPredicted RBP11.49□□□□□ -0.57
CSPG4P12-201ENST00000558282 RBMXL2O75526 392 aaKnown RBP11.49□□□□□ -0.57
CSPG4P12-201ENST00000558282 NDST3O95803 873 aa11.49□□□□□ -0.57
CSPG4P12-201ENST00000558282 H1F0P07305 194 aaKnown RBP11.49□□□□□ -0.57
CSPG4P12-201ENST00000558282 CHRNB2P17787 502 aa11.49□□□□□ -0.57
CSPG4P12-201ENST00000558282 VAMP1P23763 118 aa11.49□□□□□ -0.57
CSPG4P12-201ENST00000558282 RFC2P35250 354 aa11.49□□□□□ -0.57
CSPG4P12-201ENST00000558282 SLC1A2P43004 574 aa11.49□□□□□ -0.57
CSPG4P12-201ENST00000558282 RAB5CP51148 216 aa11.49□□□□□ -0.57
CSPG4P12-201ENST00000558282 GDF10P55107 478 aa11.49□□□□□ -0.57
CSPG4P12-201ENST00000558282 SNRPD1P62314 119 aaKnown RBP11.49□□□□□ -0.57
CSPG4P12-201ENST00000558282 SNRPD2P62316 118 aaKnown RBP11.49□□□□□ -0.57
CSPG4P12-201ENST00000558282 KLF1Q13351 362 aaPredicted RBP11.49□□□□□ -0.57
CSPG4P12-201ENST00000558282 ABCA11PQ4W5N1 156 aa11.49□□□□□ -0.57
CSPG4P12-201ENST00000558282 PRSS48Q7RTY5 328 aa11.49□□□□□ -0.57
CSPG4P12-201ENST00000558282 ANKRD46Q86W74 232 aa11.49□□□□□ -0.57
CSPG4P12-201ENST00000558282 LRRC52Q8N7C0 313 aa11.49□□□□□ -0.57
CSPG4P12-201ENST00000558282 BEST4Q8NFU0 473 aa11.49□□□□□ -0.57
CSPG4P12-201ENST00000558282 PPP1R13LQ8WUF5 828 aa11.49□□□□□ -0.57
CSPG4P12-201ENST00000558282 TMED9Q9BVK6 235 aa11.49□□□□□ -0.57
CSPG4P12-201ENST00000558282 HCN4Q9Y3Q4 1203 aa11.49□□□□□ -0.57
CSPG4P12-201ENST00000558282 TEX264Q9Y6I9 313 aa11.49□□□□□ -0.57
CSPG4P12-201ENST00000558282 CASZ1Q86V15 1759 aa11.49□□□□□ -0.57
CSPG4P12-201ENST00000558282 CLIC1O00299 241 aa11.49□□□□□ -0.57
CSPG4P12-201ENST00000558282 ESR1P03372 595 aa11.49□□□□□ -0.57
CSPG4P12-201ENST00000558282 ENDOUP21128 410 aaKnown RBP11.49□□□□□ -0.57
CSPG4P12-201ENST00000558282 GLUD2P49448 558 aa11.49□□□□□ -0.57
CSPG4P12-201ENST00000558282 SCARB2Q14108 478 aa11.49□□□□□ -0.57
CSPG4P12-201ENST00000558282 PCBP1Q15365 356 aaKnown RBP eCLIP11.49□□□□□ -0.57
CSPG4P12-201ENST00000558282 ARL9Q6T311 187 aa11.49□□□□□ -0.57
CSPG4P12-201ENST00000558282 SPARTQ8N0X7 666 aa11.49□□□□□ -0.57
CSPG4P12-201ENST00000558282 ACBD4Q8NC06 268 aa11.49□□□□□ -0.57
CSPG4P12-201ENST00000558282 OR5B17Q8NGF7 314 aa11.49□□□□□ -0.57
CSPG4P12-201ENST00000558282 C3orf49Q96BT1 292 aa11.49□□□□□ -0.57
CSPG4P12-201ENST00000558282 CNTNAP3BQ96NU0 1288 aa11.49□□□□□ -0.57
CSPG4P12-201ENST00000558282 MCCC1Q96RQ3 725 aaPredicted RBP11.49□□□□□ -0.57
CSPG4P12-201ENST00000558282 CDADC1Q9BWV3 514 aa11.49□□□□□ -0.57
CSPG4P12-201ENST00000558282 ENPP5Q9UJA9 477 aa11.49□□□□□ -0.57
CSPG4P12-201ENST00000558282 STUB1Q9UNE7 303 aa11.49□□□□□ -0.57
CSPG4P12-201ENST00000558282 A8MT66 165 aa11.49□□□□□ -0.57
CSPG4P12-201ENST00000558282 SLC1A7O00341 560 aa11.49□□□□□ -0.57
CSPG4P12-201ENST00000558282 POLR1CO15160 346 aaPredicted RBP11.49□□□□□ -0.57
CSPG4P12-201ENST00000558282 FLRT2O43155 660 aa11.49□□□□□ -0.57
CSPG4P12-201ENST00000558282 NMBRP28336 390 aa11.49□□□□□ -0.57
CSPG4P12-201ENST00000558282 RPS5P46782 204 aaKnown RBP11.49□□□□□ -0.57
CSPG4P12-201ENST00000558282 NDST2P52849 883 aa11.49□□□□□ -0.57
CSPG4P12-201ENST00000558282 DNAJB13P59910 316 aa11.49□□□□□ -0.57
CSPG4P12-201ENST00000558282 CACNG1Q06432 222 aa11.49□□□□□ -0.57
CSPG4P12-201ENST00000558282 SLC10A7Q0GE19 358 aa11.49□□□□□ -0.57
CSPG4P12-201ENST00000558282 SNTB2Q13425 540 aaKnown RBP11.49□□□□□ -0.57
CSPG4P12-201ENST00000558282 PCLAFQ15004 111 aa11.49□□□□□ -0.57
CSPG4P12-201ENST00000558282 EIPR1Q53HC9 387 aa11.49□□□□□ -0.57
CSPG4P12-201ENST00000558282 KRBOX4Q5JUW0 171 aa11.49□□□□□ -0.57
CSPG4P12-201ENST00000558282 ZNF772Q68DY9 489 aaPredicted RBP11.49□□□□□ -0.57
CSPG4P12-201ENST00000558282 CAND1Q86VP6 1230 aaKnown RBP11.49□□□□□ -0.57
CSPG4P12-201ENST00000558282 ZNF227Q86WZ6 799 aa11.49□□□□□ -0.57
CSPG4P12-201ENST00000558282 CHCHD4Q8N4Q1 142 aa11.49□□□□□ -0.57
CSPG4P12-201ENST00000558282 OR8J3Q8NGG0 315 aa11.49□□□□□ -0.57
CSPG4P12-201ENST00000558282 SGTBQ96EQ0 304 aa11.49□□□□□ -0.57
CSPG4P12-201ENST00000558282 MGLLQ99685 303 aa11.49□□□□□ -0.57
CSPG4P12-201ENST00000558282 ERVK13-1Q9NX77 482 aa11.49□□□□□ -0.57
CSPG4P12-201ENST00000558282 GFOD1Q9NXC2 390 aa11.49□□□□□ -0.57
CSPG4P12-201ENST00000558282 MYPNQ86TC9 1320 aa11.49□□□□□ -0.57
CSPG4P12-201ENST00000558282 INPPL1O15357 1258 aa11.48□□□□□ -0.57
CSPG4P12-201ENST00000558282 PRAF2O60831 178 aa11.48□□□□□ -0.57
CSPG4P12-201ENST00000558282 SNAPINO95295 136 aa11.48□□□□□ -0.57
CSPG4P12-201ENST00000558282 SSTP61278 116 aa11.48□□□□□ -0.57
CSPG4P12-201ENST00000558282 KCNJ11Q14654 390 aa11.48□□□□□ -0.57
CSPG4P12-201ENST00000558282 MSANTD2Q6P1R3 559 aa11.48□□□□□ -0.57
CSPG4P12-201ENST00000558282 HSDL2Q6YN16 418 aa11.48□□□□□ -0.57
CSPG4P12-201ENST00000558282 TERB2Q8NHR7 220 aa11.48□□□□□ -0.57
CSPG4P12-201ENST00000558282 NEK7Q8TDX7 302 aa11.48□□□□□ -0.57
CSPG4P12-201ENST00000558282 CCDC120Q96HB5 630 aa11.48□□□□□ -0.57
CSPG4P12-201ENST00000558282 AIF1LQ9BQI0 150 aa11.48□□□□□ -0.57
CSPG4P12-201ENST00000558282 TTLL2Q9BWV7 592 aa11.48□□□□□ -0.57
CSPG4P12-201ENST00000558282 OR51V1Q9H2C8 321 aa11.48□□□□□ -0.57
CSPG4P12-201ENST00000558282 FN3KQ9H479 309 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 6.2 ms