RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 TMEM200AQ86VY9 491 aa4.93□□□□□ -1.62
SPG11-208ENST00000558155 SERPINA9Q86WD7 417 aa4.93□□□□□ -1.62
SPG11-208ENST00000558155 DOLPP1Q86YN1 238 aa4.93□□□□□ -1.62
SPG11-208ENST00000558155 GHDCQ8N2G8 530 aa4.93□□□□□ -1.62
SPG11-208ENST00000558155 HORMAD2Q8N7B1 307 aa4.93□□□□□ -1.62
SPG11-208ENST00000558155 TMEM178AQ8NBL3 297 aa4.93□□□□□ -1.62
SPG11-208ENST00000558155 LILRB4Q8NHJ6 448 aa4.93□□□□□ -1.62
SPG11-208ENST00000558155 AGAP11Q8TF27 550 aa4.93□□□□□ -1.62
SPG11-208ENST00000558155 METTL21AQ8WXB1 218 aa4.93□□□□□ -1.62
SPG11-208ENST00000558155 ELMO1Q92556 727 aa4.93□□□□□ -1.62
SPG11-208ENST00000558155 SYN2Q92777 582 aaPredicted RBP4.93□□□□□ -1.62
SPG11-208ENST00000558155 OXNAD1Q96HP4 312 aaPredicted RBP4.93□□□□□ -1.62
SPG11-208ENST00000558155 ZNF285Q96NJ3 590 aa4.93□□□□□ -1.62
SPG11-208ENST00000558155 DMRTA2Q96SC8 542 aa4.93□□□□□ -1.62
SPG11-208ENST00000558155 UTP23Q9BRU9 249 aaKnown RBP4.93□□□□□ -1.62
SPG11-208ENST00000558155 TMEM121Q9BTD3 319 aa4.93□□□□□ -1.62
SPG11-208ENST00000558155 TUBB6Q9BUF5 446 aa4.93□□□□□ -1.62
SPG11-208ENST00000558155 ZNF700Q9H0M5 742 aa4.93□□□□□ -1.62
SPG11-208ENST00000558155 CXXC4Q9H2H0 198 aa4.93□□□□□ -1.62
SPG11-208ENST00000558155 GSX1Q9H4S2 264 aaPredicted RBP4.93□□□□□ -1.62
SPG11-208ENST00000558155 KCNJ16Q9NPI9 418 aa4.93□□□□□ -1.62
SPG11-208ENST00000558155 TRPC4Q9UBN4 977 aa4.93□□□□□ -1.62
SPG11-208ENST00000558155 ZC3H7BQ9UGR2 993 aaKnown RBP4.93□□□□□ -1.62
SPG11-208ENST00000558155 RSPH14Q9UHP6 348 aa4.93□□□□□ -1.62
SPG11-208ENST00000558155 SLC39A10Q9ULF5 831 aa4.93□□□□□ -1.62
SPG11-208ENST00000558155 MKL2Q9ULH7 1088 aa4.93□□□□□ -1.62
SPG11-208ENST00000558155 PPT2Q9UMR5 302 aa4.93□□□□□ -1.62
SPG11-208ENST00000558155 KLHL20Q9Y2M5 609 aa4.93□□□□□ -1.62
SPG11-208ENST00000558155 AAR2Q9Y312 384 aaKnown RBP4.93□□□□□ -1.62
SPG11-208ENST00000558155 FAM169AQ9Y6X4 670 aa4.93□□□□□ -1.62
SPG11-208ENST00000558155 CPAMD8Q8IZJ3 1885 aa4.92□□□□□ -1.62
SPG11-208ENST00000558155 IGLV3-16A0A075B6K0 115 aa4.92□□□□□ -1.62
SPG11-208ENST00000558155 A0A087X0T9 212 aa4.92□□□□□ -1.62
SPG11-208ENST00000558155 LOC102723996A0A087X1L8 192 aa4.92□□□□□ -1.62
SPG11-208ENST00000558155 ASPDHA6ND91 283 aa4.92□□□□□ -1.62
SPG11-208ENST00000558155 C3orf70A6NLC5 250 aaPredicted RBP4.92□□□□□ -1.62
SPG11-208ENST00000558155 USP27XA6NNY8 438 aa4.92□□□□□ -1.62
SPG11-208ENST00000558155 SMTNL1A8MU46 457 aa4.92□□□□□ -1.62
SPG11-208ENST00000558155 HACD1B0YJ81 288 aa4.92□□□□□ -1.62
SPG11-208ENST00000558155 CDK2AP1O14519 115 aa4.92□□□□□ -1.62
SPG11-208ENST00000558155 SUN1O94901 812 aa4.92□□□□□ -1.62
SPG11-208ENST00000558155 EIF2S1P05198 315 aaKnown RBP4.92□□□□□ -1.62
SPG11-208ENST00000558155 ANXA5P08758 320 aa4.92□□□□□ -1.62
SPG11-208ENST00000558155 HOXD4P09016 255 aaPredicted RBP4.92□□□□□ -1.62
SPG11-208ENST00000558155 OR56A5P0C7T3 313 aa4.92□□□□□ -1.62
SPG11-208ENST00000558155 FAM228BP0C875 321 aa4.92□□□□□ -1.62
SPG11-208ENST00000558155 TPBGLP0DKB5 382 aa4.92□□□□□ -1.62
SPG11-208ENST00000558155 ERVK-10P10266 1014 aa4.92□□□□□ -1.62
SPG11-208ENST00000558155 IGFBP2P18065 325 aa4.92□□□□□ -1.62
SPG11-208ENST00000558155 DNASE1P24855 282 aa4.92□□□□□ -1.62
SPG11-208ENST00000558155 ACRV1P26436 265 aa4.92□□□□□ -1.62
SPG11-208ENST00000558155 PEBP1P30086 187 aaKnown RBP4.92□□□□□ -1.62
SPG11-208ENST00000558155 PKLRP30613 574 aa4.92□□□□□ -1.62
SPG11-208ENST00000558155 MC4RP32245 332 aa4.92□□□□□ -1.62
SPG11-208ENST00000558155 EEF1A2Q05639 463 aaKnown RBP4.92□□□□□ -1.62
SPG11-208ENST00000558155 LTBQ06643 244 aa4.92□□□□□ -1.62
SPG11-208ENST00000558155 MESDQ14696 234 aa4.92□□□□□ -1.62
SPG11-208ENST00000558155 NAA25Q14CX7 972 aa4.92□□□□□ -1.62
SPG11-208ENST00000558155 TAZQ16635 292 aa4.92□□□□□ -1.62
SPG11-208ENST00000558155 MEP1AQ16819 746 aa4.92□□□□□ -1.62
SPG11-208ENST00000558155 SYTL3Q4VX76 610 aa4.92□□□□□ -1.62
SPG11-208ENST00000558155 DNAJC21Q5F1R6 531 aaKnown RBP4.92□□□□□ -1.62
SPG11-208ENST00000558155 FIGNQ5HY92 759 aa4.92□□□□□ -1.62
SPG11-208ENST00000558155 LRRC38Q5VT99 294 aa4.92□□□□□ -1.62
SPG11-208ENST00000558155 E4F1Q66K89 784 aaPredicted RBP4.92□□□□□ -1.62
SPG11-208ENST00000558155 ITPRIPL1Q6GPH6 555 aa4.92□□□□□ -1.62
SPG11-208ENST00000558155 SLC25A25Q6KCM7 469 aa4.92□□□□□ -1.62
SPG11-208ENST00000558155 TTC23LQ6PF05 361 aa4.92□□□□□ -1.62
SPG11-208ENST00000558155 TMEM205Q6UW68 189 aa4.92□□□□□ -1.62
SPG11-208ENST00000558155 ARHGEF18Q6ZSZ5 1173 aa4.92□□□□□ -1.62
SPG11-208ENST00000558155 CEP128Q6ZU80 1094 aa4.92□□□□□ -1.62
SPG11-208ENST00000558155 NEK10Q6ZWH5 1172 aa4.92□□□□□ -1.62
SPG11-208ENST00000558155 BIVMQ86UB2 503 aa4.92□□□□□ -1.62
SPG11-208ENST00000558155 CPNE8Q86YQ8 564 aa4.92□□□□□ -1.62
SPG11-208ENST00000558155 DMRTC2Q8IXT2 367 aaPredicted RBP4.92□□□□□ -1.62
SPG11-208ENST00000558155 CLYBLQ8N0X4 340 aa4.92□□□□□ -1.62
SPG11-208ENST00000558155 ZNF567Q8N184 647 aa4.92□□□□□ -1.62
SPG11-208ENST00000558155 RAB42Q8N4Z0 105 aa4.92□□□□□ -1.62
SPG11-208ENST00000558155 C2orf73Q8N5S3 287 aaPredicted RBP4.92□□□□□ -1.62
SPG11-208ENST00000558155 CLDN19Q8N6F1 224 aa4.92□□□□□ -1.62
SPG11-208ENST00000558155 MYRIPQ8NFW9 859 aa4.92□□□□□ -1.62
SPG11-208ENST00000558155 OR13C4Q8NGS5 318 aa4.92□□□□□ -1.62
SPG11-208ENST00000558155 OR2L8Q8NGY9 312 aa4.92□□□□□ -1.62
SPG11-208ENST00000558155 CTNNBL1Q8WYA6 563 aaPredicted RBP4.92□□□□□ -1.62
SPG11-208ENST00000558155 RND1Q92730 232 aa4.92□□□□□ -1.62
SPG11-208ENST00000558155 P3H4Q92791 437 aa4.92□□□□□ -1.62
SPG11-208ENST00000558155 LRRC45Q96CN5 670 aa4.92□□□□□ -1.62
SPG11-208ENST00000558155 MVB12AQ96EY5 273 aa4.92□□□□□ -1.62
SPG11-208ENST00000558155 CABS1Q96KC9 395 aa4.92□□□□□ -1.62
SPG11-208ENST00000558155 IMMP1LQ96LU5 166 aa4.92□□□□□ -1.62
SPG11-208ENST00000558155 ALS2CR12Q96Q35 445 aa4.92□□□□□ -1.62
SPG11-208ENST00000558155 TTC1Q99614 292 aa4.92□□□□□ -1.62
SPG11-208ENST00000558155 FERMT1Q9BQL6 677 aa4.92□□□□□ -1.62
SPG11-208ENST00000558155 MESP1Q9BRJ9 268 aa4.92□□□□□ -1.62
SPG11-208ENST00000558155 FICDQ9BVA6 458 aa4.92□□□□□ -1.62
SPG11-208ENST00000558155 TGIF2Q9GZN2 237 aa4.92□□□□□ -1.62
SPG11-208ENST00000558155 NAT10Q9H0A0 1025 aaKnown RBP4.92□□□□□ -1.62
SPG11-208ENST00000558155 TSPAN10Q9H1Z9 355 aaPredicted RBP4.92□□□□□ -1.62
SPG11-208ENST00000558155 KCNK13Q9HB14 408 aa4.92□□□□□ -1.62
SPG11-208ENST00000558155 MKKSQ9NPJ1 570 aaPredicted RBP4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms