RNA–Protein interactions for RNA: ENST00000557933.5

LDLR-205, Transcript of low density lipoprotein receptor, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LDLR, Length 2,941 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-205ENST00000557933 EIF2DP41214 584 aaKnown RBP12□□□□□ -0.49
LDLR-205ENST00000557933 SLC19A1P41440 591 aa12□□□□□ -0.49
LDLR-205ENST00000557933 CACHD1Q5VU97 1274 aa12□□□□□ -0.49
LDLR-205ENST00000557933 RNF219Q5W0B1 726 aaPredicted RBP12□□□□□ -0.49
LDLR-205ENST00000557933 VASH1Q7L8A9 365 aaPredicted RBP12□□□□□ -0.49
LDLR-205ENST00000557933 P3H2Q8IVL5 708 aa12□□□□□ -0.49
LDLR-205ENST00000557933 OR8J3Q8NGG0 315 aa12□□□□□ -0.49
LDLR-205ENST00000557933 YIPF6Q96EC8 236 aa12□□□□□ -0.49
LDLR-205ENST00000557933 HSH2DQ96JZ2 352 aa12□□□□□ -0.49
LDLR-205ENST00000557933 PANX1Q96RD7 426 aa12□□□□□ -0.49
LDLR-205ENST00000557933 COPS4Q9BT78 406 aa12□□□□□ -0.49
LDLR-205ENST00000557933 GORASP2Q9H8Y8 452 aa12□□□□□ -0.49
LDLR-205ENST00000557933 TLR8Q9NR97 1041 aaKnown RBP12□□□□□ -0.49
LDLR-205ENST00000557933 RHCGQ9UBD6 479 aa12□□□□□ -0.49
LDLR-205ENST00000557933 CCL27Q9Y4X3 112 aa12□□□□□ -0.49
LDLR-205ENST00000557933 POU1F1P28069 291 aa12□□□□□ -0.49
LDLR-205ENST00000557933 TGFBR2P37173 567 aa12□□□□□ -0.49
LDLR-205ENST00000557933 SERPINB10P48595 397 aa12□□□□□ -0.49
LDLR-205ENST00000557933 TTPAP49638 278 aa12□□□□□ -0.49
LDLR-205ENST00000557933 OR2T5Q6IEZ7 315 aa12□□□□□ -0.49
LDLR-205ENST00000557933 CCBE1Q6UXH8 406 aaPredicted RBP12□□□□□ -0.49
LDLR-205ENST00000557933 TCAIMQ8N3R3 496 aa12□□□□□ -0.49
LDLR-205ENST00000557933 OR2T29Q8NH02 315 aa12□□□□□ -0.49
LDLR-205ENST00000557933 C1orf74Q96LT6 269 aa12□□□□□ -0.49
LDLR-205ENST00000557933 PPP1R2P1Q96PQ5 205 aa12□□□□□ -0.49
LDLR-205ENST00000557933 NEDD4LQ96PU5 975 aa12□□□□□ -0.49
LDLR-205ENST00000557933 GPR62Q9BZJ7 368 aa12□□□□□ -0.49
LDLR-205ENST00000557933 CLPBQ9H078 707 aa12□□□□□ -0.49
LDLR-205ENST00000557933 EXOSC4Q9NPD3 245 aaKnown RBP12□□□□□ -0.49
LDLR-205ENST00000557933 SERHLQ9NQF3 203 aa12□□□□□ -0.49
LDLR-205ENST00000557933 AASDHPPTQ9NRN7 309 aa12□□□□□ -0.49
LDLR-205ENST00000557933 ANKMY1Q9P2S6 941 aa12□□□□□ -0.49
LDLR-205ENST00000557933 SRRDQ9UH36 339 aa12□□□□□ -0.49
LDLR-205ENST00000557933 RAPGEFL1Q9UHV5 662 aa12□□□□□ -0.49
LDLR-205ENST00000557933 UGT2A1Q9Y4X1 527 aa12□□□□□ -0.49
LDLR-205ENST00000557933 H3BM21 787 aa11.99□□□□□ -0.49
LDLR-205ENST00000557933 RGS14O43566 566 aa11.99□□□□□ -0.49
LDLR-205ENST00000557933 CLDN7O95471 211 aa11.99□□□□□ -0.49
LDLR-205ENST00000557933 RPL9P32969 192 aaKnown RBP11.99□□□□□ -0.49
LDLR-205ENST00000557933 MAD2L1BPQ15013 274 aaPredicted RBP11.99□□□□□ -0.49
LDLR-205ENST00000557933 TAF1AQ15573 450 aaPredicted RBP11.99□□□□□ -0.49
LDLR-205ENST00000557933 PARP15Q460N3 678 aa11.99□□□□□ -0.49
LDLR-205ENST00000557933 ZMAT1Q5H9K5 638 aa11.99□□□□□ -0.49
LDLR-205ENST00000557933 GPR149Q86SP6 731 aa11.99□□□□□ -0.49
LDLR-205ENST00000557933 C11orf74Q86VG3 221 aa11.99□□□□□ -0.49
LDLR-205ENST00000557933 RHOXF1Q8NHV9 184 aa11.99□□□□□ -0.49
LDLR-205ENST00000557933 SPPL2AQ8TCT8 520 aa11.99□□□□□ -0.49
LDLR-205ENST00000557933 TSPEARQ8WU66 669 aa11.99□□□□□ -0.49
LDLR-205ENST00000557933 PDFQ9HBH1 243 aa11.99□□□□□ -0.49
LDLR-205ENST00000557933 PLSCR3Q9NRY6 295 aa11.99□□□□□ -0.49
LDLR-205ENST00000557933 THUMPD1Q9NXG2 353 aaKnown RBP11.99□□□□□ -0.49
LDLR-205ENST00000557933 OGDHLQ9ULD0 1010 aa11.99□□□□□ -0.49
LDLR-205ENST00000557933 TPRKBQ9Y3C4 175 aa11.99□□□□□ -0.49
LDLR-205ENST00000557933 MYO16Q9Y6X6 1858 aa11.99□□□□□ -0.49
LDLR-205ENST00000557933 ARNTLO00327 626 aa11.99□□□□□ -0.49
LDLR-205ENST00000557933 YY2O15391 372 aa11.99□□□□□ -0.49
LDLR-205ENST00000557933 SEPT4O43236 478 aa11.99□□□□□ -0.49
LDLR-205ENST00000557933 KLKB1P03952 638 aa11.99□□□□□ -0.49
LDLR-205ENST00000557933 RHOCP08134 193 aa11.99□□□□□ -0.49
LDLR-205ENST00000557933 ENGP17813 658 aa11.99□□□□□ -0.49
LDLR-205ENST00000557933 RPS14P62263 151 aaKnown RBP11.99□□□□□ -0.49
LDLR-205ENST00000557933 FXNQ16595 210 aa11.99□□□□□ -0.49
LDLR-205ENST00000557933 TIGD6Q17RP2 521 aa11.99□□□□□ -0.49
LDLR-205ENST00000557933 ZXDCQ2QGD7 858 aaPredicted RBP11.99□□□□□ -0.49
LDLR-205ENST00000557933 USP39Q53GS9 565 aaKnown RBP11.99□□□□□ -0.49
LDLR-205ENST00000557933 TPRG1LQ5T0D9 272 aa11.99□□□□□ -0.49
LDLR-205ENST00000557933 PRSS55Q6UWB4 352 aaPredicted RBP11.99□□□□□ -0.49
LDLR-205ENST00000557933 TSPAN33Q86UF1 283 aa11.99□□□□□ -0.49
LDLR-205ENST00000557933 ENTHD1Q8IYW4 607 aa11.99□□□□□ -0.49
LDLR-205ENST00000557933 OR8H2Q8N162 312 aa11.99□□□□□ -0.49
LDLR-205ENST00000557933 CARNMT1Q8N4J0 409 aa11.99□□□□□ -0.49
LDLR-205ENST00000557933 VANGL1Q8TAA9 524 aaPredicted RBP11.99□□□□□ -0.49
LDLR-205ENST00000557933 APH1BQ8WW43 257 aa11.99□□□□□ -0.49
LDLR-205ENST00000557933 TADA1Q96BN2 335 aa11.99□□□□□ -0.49
LDLR-205ENST00000557933 CNDP2Q96KP4 475 aaKnown RBP11.99□□□□□ -0.49
LDLR-205ENST00000557933 ARL15Q9NXU5 204 aa11.99□□□□□ -0.49
LDLR-205ENST00000557933 CD84Q9UIB8 345 aa11.99□□□□□ -0.49
LDLR-205ENST00000557933 SCML2Q9UQR0 700 aa11.99□□□□□ -0.49
LDLR-205ENST00000557933 BTBD3Q9Y2F9 522 aa11.99□□□□□ -0.49
LDLR-205ENST00000557933 J3KTA2 159 aa11.98□□□□□ -0.49
LDLR-205ENST00000557933 M0QZQ0 153 aa11.98□□□□□ -0.49
LDLR-205ENST00000557933 M0R082 166 aa11.98□□□□□ -0.49
LDLR-205ENST00000557933 MANBAO00462 879 aa11.98□□□□□ -0.49
LDLR-205ENST00000557933 ASNA1O43681 348 aa11.98□□□□□ -0.49
LDLR-205ENST00000557933 RFPL2O75678 378 aa11.98□□□□□ -0.49
LDLR-205ENST00000557933 CCNKO75909 580 aa11.98□□□□□ -0.49
LDLR-205ENST00000557933 HPRP00739 348 aa11.98□□□□□ -0.49
LDLR-205ENST00000557933 PTHP01270 115 aa11.98□□□□□ -0.49
LDLR-205ENST00000557933 VEGFBP49765 207 aa11.98□□□□□ -0.49
LDLR-205ENST00000557933 MXD1Q05195 221 aa11.98□□□□□ -0.49
LDLR-205ENST00000557933 ZNF404Q494X3 552 aa11.98□□□□□ -0.49
LDLR-205ENST00000557933 METTL4Q8N3J2 472 aa11.98□□□□□ -0.49
LDLR-205ENST00000557933 SVOPLQ8N434 492 aa11.98□□□□□ -0.49
LDLR-205ENST00000557933 TTC30BQ8N4P2 665 aa11.98□□□□□ -0.49
LDLR-205ENST00000557933 PARP16Q8N5Y8 322 aa11.98□□□□□ -0.49
LDLR-205ENST00000557933 GPR156Q8NFN8 814 aa11.98□□□□□ -0.49
LDLR-205ENST00000557933 MYLIPQ8WY64 445 aa11.98□□□□□ -0.49
LDLR-205ENST00000557933 TRIB2Q92519 343 aa11.98□□□□□ -0.49
LDLR-205ENST00000557933 SUSD3Q96L08 255 aa11.98□□□□□ -0.49
LDLR-205ENST00000557933 PPP3R2Q96LZ3 170 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms