RNA–Protein interactions for RNA: ENST00000557884.5

USP3-205, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 958 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-205ENST00000557884 DCBLD2Q96PD2 775 aa13.79□□□□□ -0.2
USP3-205ENST00000557884 DPH7Q9BTV6 452 aa13.79□□□□□ -0.2
USP3-205ENST00000557884 FANCEQ9HB96 536 aa13.79□□□□□ -0.2
USP3-205ENST00000557884 MRPS30Q9NP92 439 aaKnown RBP13.79□□□□□ -0.2
USP3-205ENST00000557884 CUEDC1Q9NWM3 386 aaPredicted RBP13.79□□□□□ -0.2
USP3-205ENST00000557884 RAB21Q9UL25 225 aa13.79□□□□□ -0.2
USP3-205ENST00000557884 RNF112Q9ULX5 631 aa13.79□□□□□ -0.2
USP3-205ENST00000557884 SH2B3Q9UQQ2 575 aa13.79□□□□□ -0.2
USP3-205ENST00000557884 APC2O95996 2303 aa13.79□□□□□ -0.2
USP3-205ENST00000557884 IQANK1A0A1B0GTG1 560 aa13.78□□□□□ -0.2
USP3-205ENST00000557884 CCNDBP1O95273 360 aa13.78□□□□□ -0.2
USP3-205ENST00000557884 FKBP9O95302 570 aa13.78□□□□□ -0.2
USP3-205ENST00000557884 TIAF1O95411 115 aa13.78□□□□□ -0.2
USP3-205ENST00000557884 CTSBP07858 339 aa13.78□□□□□ -0.2
USP3-205ENST00000557884 ANXA5P08758 320 aa13.78□□□□□ -0.2
USP3-205ENST00000557884 FGF5P12034 268 aa13.78□□□□□ -0.2
USP3-205ENST00000557884 KCNC1P48547 511 aa13.78□□□□□ -0.2
USP3-205ENST00000557884 PRDX1Q06830 199 aaKnown RBP13.78□□□□□ -0.2
USP3-205ENST00000557884 IL11RAQ14626 422 aa13.78□□□□□ -0.2
USP3-205ENST00000557884 TGFBIQ15582 683 aa13.78□□□□□ -0.2
USP3-205ENST00000557884 FBXO48Q5FWF7 155 aa13.78□□□□□ -0.2
USP3-205ENST00000557884 PRAMEF17Q5VTA0 474 aa13.78□□□□□ -0.2
USP3-205ENST00000557884 CAPN13Q6MZZ7 669 aaPredicted RBP13.78□□□□□ -0.2
USP3-205ENST00000557884 PWWP2BQ6NUJ5 590 aa13.78□□□□□ -0.2
USP3-205ENST00000557884 ADCK2Q7Z695 626 aa13.78□□□□□ -0.2
USP3-205ENST00000557884 CCDC91Q7Z6B0 441 aa13.78□□□□□ -0.2
USP3-205ENST00000557884 ISCA2Q86U28 154 aa13.78□□□□□ -0.2
USP3-205ENST00000557884 PPP1R3BQ86XI6 285 aa13.78□□□□□ -0.2
USP3-205ENST00000557884 PROSER1Q86XN7 944 aa13.78□□□□□ -0.2
USP3-205ENST00000557884 PLD6Q8N2A8 252 aaKnown RBP13.78□□□□□ -0.2
USP3-205ENST00000557884 SNIP1Q8TAD8 396 aaKnown RBP13.78□□□□□ -0.2
USP3-205ENST00000557884 EPS8L3Q8TE67 593 aaKnown RBP13.78□□□□□ -0.2
USP3-205ENST00000557884 KIAA1191Q96A73 305 aa13.78□□□□□ -0.2
USP3-205ENST00000557884 ZNF501Q96CX3 271 aaPredicted RBP13.78□□□□□ -0.2
USP3-205ENST00000557884 TEFMQ96QE5 360 aaKnown RBP13.78□□□□□ -0.2
USP3-205ENST00000557884 SGPP1Q9BX95 441 aa13.78□□□□□ -0.2
USP3-205ENST00000557884 PCMTD2Q9NV79 361 aa13.78□□□□□ -0.2
USP3-205ENST00000557884 ZNF358Q9NW07 568 aa13.78□□□□□ -0.2
USP3-205ENST00000557884 IRAK4Q9NWZ3 460 aa13.78□□□□□ -0.2
USP3-205ENST00000557884 CD274Q9NZQ7 290 aa13.78□□□□□ -0.2
USP3-205ENST00000557884 FETUBQ9UGM5 382 aa13.78□□□□□ -0.2
USP3-205ENST00000557884 IGKV1-8A0A0C4DH67 115 aa13.77□□□□□ -0.21
USP3-205ENST00000557884 TEX51A0A1B0GUA7 166 aa13.77□□□□□ -0.21
USP3-205ENST00000557884 FOXO6A8MYZ6 492 aa13.77□□□□□ -0.21
USP3-205ENST00000557884 SUPT3HB4E1H0 165 aa13.77□□□□□ -0.21
USP3-205ENST00000557884 UBXN8O00124 270 aa13.77□□□□□ -0.21
USP3-205ENST00000557884 CTSVO60911 334 aa13.77□□□□□ -0.21
USP3-205ENST00000557884 KERAO60938 352 aa13.77□□□□□ -0.21
USP3-205ENST00000557884 SUPT3HO75486 399 aa13.77□□□□□ -0.21
USP3-205ENST00000557884 RFPL1O75677 317 aa13.77□□□□□ -0.21
USP3-205ENST00000557884 STK17BO94768 372 aa13.77□□□□□ -0.21
USP3-205ENST00000557884 KIAA0754O94854 1291 aa13.77□□□□□ -0.21
USP3-205ENST00000557884 KLHL2O95198 593 aa13.77□□□□□ -0.21
USP3-205ENST00000557884 NTRK1P04629 796 aa13.77□□□□□ -0.21
USP3-205ENST00000557884 SLC26A3P40879 764 aa13.77□□□□□ -0.21
USP3-205ENST00000557884 CDKL1Q00532 357 aa13.77□□□□□ -0.21
USP3-205ENST00000557884 TGIF1Q15583 401 aa13.77□□□□□ -0.21
USP3-205ENST00000557884 PTCHD3Q3KNS1 767 aa13.77□□□□□ -0.21
USP3-205ENST00000557884 KLC3Q6P597 504 aa13.77□□□□□ -0.21
USP3-205ENST00000557884 CYB5D1Q6P9G0 228 aa13.77□□□□□ -0.21
USP3-205ENST00000557884 MCATQ8IVS2 390 aaKnown RBP13.77□□□□□ -0.21
USP3-205ENST00000557884 DNAJC22Q8N4W6 341 aa13.77□□□□□ -0.21
USP3-205ENST00000557884 OR56A3Q8NH54 315 aa13.77□□□□□ -0.21
USP3-205ENST00000557884 STAG3L4Q8TBR4 150 aa13.77□□□□□ -0.21
USP3-205ENST00000557884 RHBDF1Q96CC6 855 aa13.77□□□□□ -0.21
USP3-205ENST00000557884 MTBPQ96DY7 904 aa13.77□□□□□ -0.21
USP3-205ENST00000557884 TSNARE1Q96NA8 513 aa13.77□□□□□ -0.21
USP3-205ENST00000557884 FCRL4Q96PJ5 515 aa13.77□□□□□ -0.21
USP3-205ENST00000557884 ZPBPQ9BS86 351 aa13.77□□□□□ -0.21
USP3-205ENST00000557884 ULBP3Q9BZM4 244 aa13.77□□□□□ -0.21
USP3-205ENST00000557884 SPRTNQ9H040 489 aaPredicted RBP13.77□□□□□ -0.21
USP3-205ENST00000557884 PCBD2Q9H0N5 130 aa13.77□□□□□ -0.21
USP3-205ENST00000557884 WWOXQ9NZC7 414 aa13.77□□□□□ -0.21
USP3-205ENST00000557884 ZMIZ1Q9ULJ6 1067 aa13.77□□□□□ -0.21
USP3-205ENST00000557884 ANKRD11Q6UB99 2663 aaPredicted RBP13.77□□□□□ -0.21
USP3-205ENST00000557884 A0A0J9YVX5 310 aa13.76□□□□□ -0.21
USP3-205ENST00000557884 TLDC2A0PJX2 215 aa13.76□□□□□ -0.21
USP3-205ENST00000557884 TARM1B6A8C7 271 aa13.76□□□□□ -0.21
USP3-205ENST00000557884 STMND1H3BQB6 276 aa13.76□□□□□ -0.21
USP3-205ENST00000557884 H7BY64 318 aa13.76□□□□□ -0.21
USP3-205ENST00000557884 GOLGA8RI6L899 631 aa13.76□□□□□ -0.21
USP3-205ENST00000557884 TAPBPO15533 448 aa13.76□□□□□ -0.21
USP3-205ENST00000557884 S100BP04271 92 aaPredicted RBP13.76□□□□□ -0.21
USP3-205ENST00000557884 CDH1P12830 882 aa13.76□□□□□ -0.21
USP3-205ENST00000557884 CCND1P24385 295 aa13.76□□□□□ -0.21
USP3-205ENST00000557884 GDF5P43026 501 aa13.76□□□□□ -0.21
USP3-205ENST00000557884 GABRA4P48169 554 aa13.76□□□□□ -0.21
USP3-205ENST00000557884 ITGA1P56199 1179 aa13.76□□□□□ -0.21
USP3-205ENST00000557884 ABATP80404 500 aa13.76□□□□□ -0.21
USP3-205ENST00000557884 IFFO1Q0D2I5 559 aa13.76□□□□□ -0.21
USP3-205ENST00000557884 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.76□□□□□ -0.21
USP3-205ENST00000557884 TIFABQ6ZNK6 161 aa13.76□□□□□ -0.21
USP3-205ENST00000557884 THOC6Q86W42 341 aaKnown RBP13.76□□□□□ -0.21
USP3-205ENST00000557884 C17orf64Q86WR6 236 aa13.76□□□□□ -0.21
USP3-205ENST00000557884 TMEM126BQ8IUX1 230 aa13.76□□□□□ -0.21
USP3-205ENST00000557884 PLD3Q8IV08 490 aa13.76□□□□□ -0.21
USP3-205ENST00000557884 CYP4X1Q8N118 509 aa13.76□□□□□ -0.21
USP3-205ENST00000557884 GALNT6Q8NCL4 622 aa13.76□□□□□ -0.21
USP3-205ENST00000557884 ZNF248Q8NDW4 579 aa13.76□□□□□ -0.21
USP3-205ENST00000557884 KCNE4Q8WWG9 221 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms